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17beta-hydroxysteroid dehydrogenase type 10/short chain L-3-hydroxyacyl-CoA dehydrogenase (3-hydroxyacyl-CoA dehydrogenase type-2) (Hydroxysteroid (17-beta) dehydrogenase 10)

 Q99N15_MOUSE            Unreviewed;       261 AA.
Q99N15;
01-JUN-2001, integrated into UniProtKB/TrEMBL.
01-JUN-2001, sequence version 1.
20-JUN-2018, entry version 137.
SubName: Full=17beta-hydroxysteroid dehydrogenase type 10/short chain L-3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AAK15008.1};
SubName: Full=3-hydroxyacyl-CoA dehydrogenase type-2 {ECO:0000313|Ensembl:ENSMUSP00000026289};
SubName: Full=Hydroxysteroid (17-beta) dehydrogenase 10 {ECO:0000313|EMBL:AAH27517.1};
Name=Hsd17b10 {ECO:0000313|EMBL:AAH27517.1,
ECO:0000313|Ensembl:ENSMUSP00000026289, ECO:0000313|MGI:MGI:1333871};
Synonyms=Hadh2 {ECO:0000313|MGI:MGI:1333871},
Hsd17b10/Schad {ECO:0000313|EMBL:AAK15008.1};
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090 {ECO:0000313|EMBL:AAK15008.1};
[1] {ECO:0000313|EMBL:BAC36987.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAC36987.1}, and
NOD {ECO:0000313|EMBL:BAC40505.1};
TISSUE=Thymus {ECO:0000313|EMBL:BAC40505.1}, and
Whole body {ECO:0000313|EMBL:BAC36987.1};
PubMed=10349636; DOI=10.1016/S0076-6879(99)03004-9;
Carninci P., Hayashizaki Y.;
"High-efficiency full-length cDNA cloning.";
Methods Enzymol. 303:19-44(1999).
[2] {ECO:0000313|EMBL:BAC36987.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAC36987.1}, and
NOD {ECO:0000313|EMBL:BAC40505.1};
TISSUE=Thymus {ECO:0000313|EMBL:BAC40505.1}, and
Whole body {ECO:0000313|EMBL:BAC36987.1};
PubMed=11042159; DOI=10.1101/gr.145100;
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M.,
Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.;
"Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new genes.";
Genome Res. 10:1617-1630(2000).
[3] {ECO:0000313|EMBL:BAC36987.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAC36987.1}, and
NOD {ECO:0000313|EMBL:BAC40505.1};
TISSUE=Thymus {ECO:0000313|EMBL:BAC40505.1}, and
Whole body {ECO:0000313|EMBL:BAC36987.1};
PubMed=11076861; DOI=10.1101/gr.152600;
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P.,
Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M.,
Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A.,
Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K.,
Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M.,
Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J.,
Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.;
"RIKEN integrated sequence analysis (RISA) system--384-format
sequencing pipeline with 384 multicapillary sequencer.";
Genome Res. 10:1757-1771(2000).
[4] {ECO:0000313|EMBL:AAK15008.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BALB/c {ECO:0000313|EMBL:AAK15008.1};
TISSUE=Brain {ECO:0000313|EMBL:AAK15008.1};
PubMed=11165016; DOI=10.1016/S0303-7207(00)00391-9;
He X.Y., Merz G., Chu C.H., Lin D., Yang Y.Z., Mehta P., Schulz H.,
Yang S.Y.;
"Molecular cloning, modeling, and localization of rat type 10 17beta-
hydroxysteroid dehydrogenase.";
Mol. Cell. Endocrinol. 171:89-98(2001).
[5] {ECO:0000313|EMBL:BAC36987.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAC36987.1}, and
NOD {ECO:0000313|EMBL:BAC40505.1};
TISSUE=Thymus {ECO:0000313|EMBL:BAC40505.1}, and
Whole body {ECO:0000313|EMBL:BAC36987.1};
PubMed=11217851; DOI=10.1038/35055500;
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium;
"Functional annotation of a full-length mouse cDNA collection.";
Nature 409:685-690(2001).
[6] {ECO:0000313|EMBL:AAK15008.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BALB/c {ECO:0000313|EMBL:AAK15008.1};
TISSUE=Brain {ECO:0000313|EMBL:AAK15008.1};
PubMed=11869808; DOI=10.1016/S0169-328X(02)00102-X;
He X.-Y., Wen G.-Y., Merz G., Lin D., Yang Y.-Z., Mehta P., Schulz H.,
Yang S.-Y.;
"Abundant type 10 17 beta-hydroxysteroid dehydrogenase in the
hippocampus of mouse Alzheimer's disease model.";
Brain Res. Mol. Brain Res. 99:46-53(2002).
[7] {ECO:0000313|EMBL:BAC36987.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAC36987.1}, and
NOD {ECO:0000313|EMBL:BAC40505.1};
TISSUE=Thymus {ECO:0000313|EMBL:BAC40505.1}, and
Whole body {ECO:0000313|EMBL:BAC36987.1};
PubMed=12466851; DOI=10.1038/nature01266;
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team;
"Analysis of the mouse transcriptome based on functional annotation of
60,770 full-length cDNAs.";
Nature 420:563-573(2002).
[8] {ECO:0000313|EMBL:BAC36987.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAC36987.1}, and
NOD {ECO:0000313|EMBL:BAC40505.1};
TISSUE=Thymus {ECO:0000313|EMBL:BAC40505.1}, and
Whole body {ECO:0000313|EMBL:BAC36987.1};
Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P.,
Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W.,
Hayashida K., Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T.,
Hori F., Imotani K., Ishii Y., Itoh M., Kagawa I., Kasukawa T.,
Katoh H., Kawai J., Kojima Y., Kondo S., Konno H., Kouda M., Koya S.,
Kurihara C., Matsuyama T., Miyazaki A., Murata M., Nakamura M.,
Nishi K., Nomura K., Numazaki R., Ohno M., Ohsato N., Okazaki Y.,
Saito R., Saitoh H., Sakai C., Sakai K., Sakazume N., Sano H.,
Sasaki D., Shibata K., Shinagawa A., Shiraki T., Sogabe Y., Tagami M.,
Tagawa A., Takahashi F., Takaku-Akahira S., Takeda Y., Tanaka T.,
Tomaru A., Toya T., Yasunishi A., Muramatsu M., Hayashizaki Y.;
Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AAH27517.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J {ECO:0000313|EMBL:AAH27517.1};
TISSUE=Thymus gland {ECO:0000313|EMBL:AAH27517.1};
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H.,
Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M.,
Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S.,
Feolo M., Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F.,
Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J.,
Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N.,
Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B.,
Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B.,
Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S.,
Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R.,
Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L.,
Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E.,
Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J.,
Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D.,
Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G.,
Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J.,
Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L.,
Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D.,
Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A.,
Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S.,
Makowski K.A., Bosak S., Malek J.;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[10] {ECO:0000313|EMBL:BAC36987.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAC36987.1}, and
NOD {ECO:0000313|EMBL:BAC40505.1};
TISSUE=Thymus {ECO:0000313|EMBL:BAC40505.1}, and
Whole body {ECO:0000313|EMBL:BAC36987.1};
The FANTOM Consortium;
Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group);
"The Transcriptional Landscape of the Mammalian Genome.";
Science 309:1559-1563(2005).
[11] {ECO:0000313|EMBL:BAC36987.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAC36987.1}, and
NOD {ECO:0000313|EMBL:BAC40505.1};
TISSUE=Thymus {ECO:0000313|EMBL:BAC40505.1}, and
Whole body {ECO:0000313|EMBL:BAC36987.1};
PubMed=16141073; DOI=10.1126/science.1112009;
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium;
"Antisense Transcription in the Mammalian Transcriptome.";
Science 309:1564-1566(2005).
[12] {ECO:0000313|Ensembl:ENSMUSP00000026289, ECO:0000313|Proteomes:UP000000589}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000026289,
ECO:0000313|Proteomes:UP000000589};
PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S.,
She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W.,
Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T.,
Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J.,
Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z.,
Lindblad-Toh K., Eichler E.E., Ponting C.P.;
"Lineage-specific biology revealed by a finished genome assembly of
the mouse.";
PLoS Biol. 7:E1000112-E1000112(2009).
[13] {ECO:0000213|PubMed:21183079}
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
"A tissue-specific atlas of mouse protein phosphorylation and
expression.";
Cell 143:1174-1189(2010).
[14] {ECO:0000313|Ensembl:ENSMUSP00000026289}
IDENTIFICATION.
STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000026289};
Ensembl;
Submitted (FEB-2012) to UniProtKB.
[15] {ECO:0000213|PubMed:23806337}
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=23806337; DOI=10.1016/j.molcel.2013.06.001;
Park J., Chen Y., Tishkoff D.X., Peng C., Tan M., Dai L., Xie Z.,
Zhang Y., Zwaans B.M., Skinner M.E., Lombard D.B., Zhao Y.;
"SIRT5-mediated lysine desuccinylation impacts diverse metabolic
pathways.";
Mol. Cell 50:919-930(2013).
[16] {ECO:0000213|PubMed:23576753}
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=23576753; DOI=10.1073/pnas.1302961110;
Rardin M.J., Newman J.C., Held J.M., Cusack M.P., Sorensen D.J.,
Li B., Schilling B., Mooney S.D., Kahn C.R., Verdin E., Gibson B.W.;
"Label-free quantitative proteomics of the lysine acetylome in
mitochondria identifies substrates of SIRT3 in metabolic pathways.";
Proc. Natl. Acad. Sci. U.S.A. 110:6601-6606(2013).
-!- SIMILARITY: Belongs to the short-chain dehydrogenases/reductases
(SDR) family. {ECO:0000256|RuleBase:RU000363}.
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EMBL; AL672180; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BC027517; AAH27517.1; -; mRNA.
EMBL; AF233685; AAK15008.1; -; mRNA.
EMBL; AK077735; BAC36987.1; -; mRNA.
EMBL; AK088685; BAC40505.1; -; mRNA.
RefSeq; NP_058043.3; NM_016763.2.
UniGene; Mm.6994; -.
TopDownProteomics; Q99N15; -.
Ensembl; ENSMUST00000026289; ENSMUSP00000026289; ENSMUSG00000025260.
GeneID; 15108; -.
KEGG; mmu:15108; -.
UCSC; uc009upu.1; mouse.
CTD; 3028; -.
MGI; MGI:1333871; Hsd17b10.
eggNOG; KOG1199; Eukaryota.
eggNOG; ENOG410XNNW; LUCA.
GeneTree; ENSGT00920000148965; -.
HOVERGEN; HBG002145; -.
KO; K08683; -.
TreeFam; TF354307; -.
Reactome; R-MMU-70895; Branched-chain amino acid catabolism.
ChiTaRS; Hsd17b10; mouse.
Proteomes; UP000000589; Chromosome X.
Bgee; ENSMUSG00000025260; -.
GO; GO:0030678; C:mitochondrial ribonuclease P complex; IEA:Ensembl.
GO; GO:0005739; C:mitochondrion; IDA:UniProtKB.
GO; GO:0003857; F:3-hydroxyacyl-CoA dehydrogenase activity; IEA:Ensembl.
GO; GO:0030283; F:testosterone dehydrogenase [NAD(P)] activity; IEA:Ensembl.
GO; GO:0000049; F:tRNA binding; IEA:Ensembl.
GO; GO:1990180; P:mitochondrial tRNA 3'-end processing; IEA:Ensembl.
GO; GO:0097745; P:mitochondrial tRNA 5'-end processing; IEA:Ensembl.
GO; GO:0070901; P:mitochondrial tRNA methylation; IEA:Ensembl.
GO; GO:0007005; P:mitochondrion organization; IEA:Ensembl.
GO; GO:0051289; P:protein homotetramerization; IEA:Ensembl.
InterPro; IPR036291; NAD(P)-bd_dom_sf.
InterPro; IPR020904; Sc_DH/Rdtase_CS.
InterPro; IPR002347; SDR_fam.
Pfam; PF00106; adh_short; 1.
PRINTS; PR00081; GDHRDH.
PRINTS; PR00080; SDRFAMILY.
SUPFAM; SSF51735; SSF51735; 1.
PROSITE; PS00061; ADH_SHORT; 1.
1: Evidence at protein level;
Complete proteome {ECO:0000313|Proteomes:UP000000589};
Proteomics identification {ECO:0000213|EPD:Q99N15,
ECO:0000213|MaxQB:Q99N15, ECO:0000213|PeptideAtlas:Q99N15};
Reference proteome {ECO:0000313|Proteomes:UP000000589}.
SEQUENCE 261 AA; 27274 MW; F371ED8A15FCEFAF CRC64;
MAAAVRSVKG LVAVVTGGAS GLGLATAKRL VGQGATAVLL DVPDSEGEAQ AKKLGESCIF
APANVTSEKE IQAALTLAKE KFGRIDVAVN CAGIAVAIKT YHQKKNKIHT LEDFQRVINV
NLIGTFNVIR LVAGEMGQNE PDQGGQRGVI INTASVAAFE GQVGQAAYSA SKGGIVGMTL
PIARDLAPTG IRVVTIAPGL FATPLLTTLP EKVRNFLASQ VPFPSRLGDP AEYAHLVQTI
IENPFLNGEV IRLDGAIRMQ P


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