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3-epi-6-deoxocathasterone 23-monooxygenase (EC 1.14.13.112) (Cytochrome P450 90D1)

 C90D1_ARATH             Reviewed;         491 AA.
Q94IA6; Q9LIC5;
15-JUN-2010, integrated into UniProtKB/Swiss-Prot.
01-DEC-2001, sequence version 1.
25-OCT-2017, entry version 113.
RecName: Full=3-epi-6-deoxocathasterone 23-monooxygenase;
EC=1.14.13.112;
AltName: Full=Cytochrome P450 90D1;
Name=CYP90D1; OrderedLocusNames=At3g13730; ORFNames=MMM17.20;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Columbia;
Shimada Y.;
"P450 gene repressed by brassinosteroid.";
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=10907853; DOI=10.1093/dnares/7.3.217;
Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 3. II.
Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC
and BAC clones.";
DNA Res. 7:217-221(2000).
[3]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
genome.";
Science 302:842-846(2003).
[5]
FUNCTION, AND TISSUE SPECIFICITY.
PubMed=15703058; DOI=10.1111/j.1365-313X.2004.02330.x;
Kim G.T., Fujioka S., Kozuka T., Tax F.E., Takatsuto S., Yoshida S.,
Tsukaya H.;
"CYP90C1 and CYP90D1 are involved in different steps in the
brassinosteroid biosynthesis pathway in Arabidopsis thaliana.";
Plant J. 41:710-721(2005).
[6]
FUNCTION.
PubMed=17138693; DOI=10.1105/tpc.106.045443;
Ohnishi T., Szatmari A.M., Watanabe B., Fujita S., Bancos S.,
Koncz C., Lafos M., Shibata K., Yokota T., Sakata K., Szekeres M.,
Mizutani M.;
"C-23 hydroxylation by Arabidopsis CYP90C1 and CYP90D1 reveals a novel
shortcut in brassinosteroid biosynthesis.";
Plant Cell 18:3275-3288(2006).
-!- FUNCTION: C-23 hydroxylase involved in brassinosteroids
biosynthesis. Converts directly (22S,24R)-22-hydroxy-5-alpha-
ergostan-3-one and 3-epi-6-deoxocathasterone to 3-dehydro-6-
deoxoteasterone and 6-deoxotyphasterol. These C-23 hydroxylation
shortcuts bypass campestanol, 6-deoxocathasterone, and 6-
deoxoteasterone. Functionally redundant with CYP90C1.
{ECO:0000269|PubMed:15703058, ECO:0000269|PubMed:17138693}.
-!- CATALYTIC ACTIVITY: 3-epi-6-deoxocathasterone + NADPH + O(2) = 6-
deoxotyphasterol + NADP(+) + H(2)O.
-!- CATALYTIC ACTIVITY: (22S,24R)-22-hydroxy-5-alpha-ergostan-3-one +
NADPH + O(2) = 3-dehydro-6-deoxoteasterone + NADP(+) + H(2)O.
-!- COFACTOR:
Name=heme; Xref=ChEBI:CHEBI:30413; Evidence={ECO:0000250};
-!- PATHWAY: Plant hormone biosynthesis; brassinosteroid biosynthesis.
-!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
{ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
-!- TISSUE SPECIFICITY: Expressed in leaf vascular tissue.
{ECO:0000269|PubMed:15703058}.
-!- SIMILARITY: Belongs to the cytochrome P450 family. {ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=BAB01922.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
-----------------------------------------------------------------------
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
Distributed under the Creative Commons Attribution-NoDerivs License
-----------------------------------------------------------------------
EMBL; AB066286; BAB62109.1; -; mRNA.
EMBL; AP001307; BAB01922.1; ALT_SEQ; Genomic_DNA.
EMBL; CP002686; AEE75404.1; -; Genomic_DNA.
EMBL; BT004084; AAO42111.1; -; mRNA.
EMBL; BT005093; AAO50626.1; -; mRNA.
RefSeq; NP_001327080.1; NM_001338068.1.
RefSeq; NP_566462.1; NM_112223.3.
UniGene; At.24699; -.
ProteinModelPortal; Q94IA6; -.
STRING; 3702.AT3G13730.1; -.
PaxDb; Q94IA6; -.
EnsemblPlants; AT3G13730.1; AT3G13730.1; AT3G13730.
GeneID; 820582; -.
Gramene; AT3G13730.1; AT3G13730.1; AT3G13730.
KEGG; ath:AT3G13730; -.
Araport; AT3G13730; -.
TAIR; locus:2091571; AT3G13730.
eggNOG; KOG0157; Eukaryota.
eggNOG; COG2124; LUCA.
HOGENOM; HOG000237614; -.
InParanoid; Q94IA6; -.
KO; K12638; -.
OMA; SAFVPWY; -.
OrthoDB; EOG09360A4G; -.
PhylomeDB; Q94IA6; -.
BioCyc; ARA:AT3G13730-MONOMER; -.
BioCyc; MetaCyc:AT3G13730-MONOMER; -.
Reactome; R-ATH-211916; Vitamins.
Reactome; R-ATH-5365859; RA biosynthesis pathway.
UniPathway; UPA00381; -.
PRO; PR:Q94IA6; -.
Proteomes; UP000006548; Chromosome 3.
ExpressionAtlas; Q94IA6; baseline and differential.
Genevisible; Q94IA6; AT.
GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0102097; F:(22S)-22-hydroxy-5alpha-campestan-3-one C-23 hydroxylase activity; IEA:UniProtKB-EC.
GO; GO:0020037; F:heme binding; IEA:InterPro.
GO; GO:0005506; F:iron ion binding; IEA:InterPro.
GO; GO:0016709; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; IDA:TAIR.
GO; GO:0016132; P:brassinosteroid biosynthetic process; IMP:TAIR.
GO; GO:0010268; P:brassinosteroid homeostasis; IBA:GO_Central.
GO; GO:0048366; P:leaf development; IGI:TAIR.
GO; GO:0048441; P:petal development; IGI:TAIR.
GO; GO:0048443; P:stamen development; IGI:TAIR.
GO; GO:0016125; P:sterol metabolic process; IBA:GO_Central.
Gene3D; 1.10.630.10; -; 1.
InterPro; IPR001128; Cyt_P450.
InterPro; IPR017972; Cyt_P450_CS.
InterPro; IPR002401; Cyt_P450_E_grp-I.
InterPro; IPR036396; Cyt_P450_sf.
Pfam; PF00067; p450; 1.
PRINTS; PR00463; EP450I.
SUPFAM; SSF48264; SSF48264; 1.
PROSITE; PS00086; CYTOCHROME_P450; 1.
2: Evidence at transcript level;
Brassinosteroid biosynthesis; Complete proteome;
Endoplasmic reticulum; Heme; Iron; Lipid biosynthesis;
Lipid metabolism; Membrane; Metal-binding; Monooxygenase; NADP;
Oxidoreductase; Reference proteome; Steroid biosynthesis;
Transmembrane; Transmembrane helix.
CHAIN 1 491 3-epi-6-deoxocathasterone 23-
monooxygenase.
/FTId=PRO_0000394999.
TRANSMEM 7 27 Helical. {ECO:0000255}.
METAL 442 442 Iron (heme axial ligand). {ECO:0000250}.
SEQUENCE 491 AA; 56153 MW; 02FB908A91995A40 CRC64;
MDTSSSLLFF SFFFFIIIVI FNKINGLRSS PASKKKLNDH HVTSQSHGPK FPHGSLGWPV
IGETIEFVSS AYSDRPESFM DKRRLMYGRV FKSHIFGTAT IVSTDAEVNR AVLQSDSTAF
VPFYPKTVRE LMGKSSILLI NGSLHRRFHG LVGSFLKSPL LKAQIVRDMH KFLSESMDLW
SEDQPVLLQD VSKTVAFKVL AKALISVEKG EDLEELKREF ENFISGLMSL PINFPGTQLH
RSLQAKKNMV KQVERIIEGK IRKTKNKEED DVIAKDVVDV LLKDSSEHLT HNLIANNMID
MMIPGHDSVP VLITLAVKFL SDSPAALNLL TEENMKLKSL KELTGEPLYW NDYLSLPFTQ
KVITETLRMG NVIIGVMRKA MKDVEIKGYV IPKGWCFLAY LRSVHLDKLY YESPYKFNPW
RWQERDMNTS SFSPFGGGQR LCPGLDLARL ETSVFLHHLV TRFRWIAEED TIINFPTVHM
KNKLPIWIKR I


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