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30S ribosomal protein S5

 RS5_THET8               Reviewed;         162 AA.
Q5SHQ5;
10-MAY-2005, integrated into UniProtKB/Swiss-Prot.
23-JAN-2007, sequence version 3.
10-OCT-2018, entry version 131.
RecName: Full=30S ribosomal protein S5;
Name=rpsE; OrderedLocusNames=TTHA1675;
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579).
Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae;
Thermus.
NCBI_TaxID=300852;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=HB8 / ATCC 27634 / DSM 579;
Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y.,
Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.;
"Complete genome sequence of Thermus thermophilus HB8.";
Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
[2]
PROTEIN SEQUENCE OF 2-44.
PubMed=7957245; DOI=10.1111/j.1432-1033.1994.tb20038.x;
Tsiboli P., Herfurth E., Choli T.;
"Purification and characterization of the 30S ribosomal proteins from
the bacterium Thermus thermophilus.";
Eur. J. Biochem. 226:169-177(1994).
[3]
MASS SPECTROMETRY.
STRAIN=HB8 / ATCC 27634 / DSM 579;
PubMed=16287167; DOI=10.1002/pmic.200402111;
Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.;
"Extending ribosomal protein identifications to unsequenced bacterial
strains using matrix-assisted laser desorption/ionization mass
spectrometry.";
Proteomics 5:4818-4831(2005).
[4]
X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE 30S SUBUNIT.
PubMed=10476960; DOI=10.1038/23631;
Clemons W.M. Jr., May J.L.C., Wimberly B.T., McCutcheon J.P.,
Capel M.S., Ramakrishnan V.;
"Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.";
Nature 400:833-840(1999).
[5]
X-RAY CRYSTALLOGRAPHY (4.5 ANGSTROMS).
PubMed=10588692; DOI=10.1073/pnas.96.25.14252;
Tocilj A., Schluenzen F., Janell D., Gluehmann M., Hansen H.A.,
Harms J., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.;
"The small ribosomal subunit from Thermus thermophilus at 4.5 A
resolution: pattern fittings and the identification of a functional
site.";
Proc. Natl. Acad. Sci. U.S.A. 96:14252-14257(1999).
[6]
X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
PubMed=11014182; DOI=10.1038/35030006;
Wimberly B.T., Brodersen D.E., Clemons W.M. Jr., Morgan-Warren R.J.,
Carter A.P., Vonrhein C., Hartsch T., Ramakrishnan V.;
"Structure of the 30S ribosomal subunit.";
Nature 407:327-339(2000).
[7]
X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
PubMed=11007480; DOI=10.1016/S0092-8674(00)00084-2;
Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M.,
Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.;
"Structure of functionally activated small ribosomal subunit at 3.3 A
resolution.";
Cell 102:615-623(2000).
[8]
X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
PubMed=11163189; DOI=10.1016/S0092-8674(00)00216-6;
Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J.,
Wimberly B.T., Ramakrishnan V.;
"The structural basis for the action of the antibiotics tetracycline,
pactamycin, and hygromycin B on the 30S ribosomal subunit.";
Cell 103:1143-1154(2000).
[9]
X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
PubMed=11014183; DOI=10.1038/35030019;
Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J.,
Wimberly B.T., Ramakrishnan V.;
"Functional insights from the structure of the 30S ribosomal subunit
and its interactions with antibiotics.";
Nature 407:340-348(2000).
[10]
X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
PubMed=11511350; DOI=10.1016/S0092-8674(01)00435-4;
Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.;
"The path of messenger RNA through the ribosome.";
Cell 106:233-241(2001).
[11]
X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
PubMed=11296217; DOI=10.1093/emboj/20.8.1829;
Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M.,
Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T.,
Yonath A., Franceschi F.;
"Crystal structures of complexes of the small ribosomal subunit with
tetracycline, edeine and IF3.";
EMBO J. 20:1829-1839(2001).
[12]
X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
PubMed=11228145; DOI=10.1126/science.1057766;
Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J.,
Hartsch T., Wimberly B.T., Ramakrishnan V.;
"Crystal structure of an initiation factor bound to the 30S ribosomal
subunit.";
Science 291:498-501(2001).
[13]
X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
PubMed=11283358; DOI=10.1126/science.1060089;
Yusupov M.M., Yusupova G.Z., Baucom A., Lieberman K., Earnest T.N.,
Cate J.H.D., Noller H.F.;
"Crystal structure of the ribosome at 5.5 A resolution.";
Science 292:883-896(2001).
[14]
X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
PubMed=11340196; DOI=10.1126/science.1060612;
Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P.,
Ramakrishnan V.;
"Recognition of cognate transfer RNA by the 30S ribosomal subunit.";
Science 292:897-902(2001).
[15]
X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
PubMed=11866529; DOI=10.1006/jmbi.2001.5359;
Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T.,
Ramakrishnan V.;
"Crystal structure of the 30S ribosomal subunit from Thermus
thermophilus: structure of the proteins and their interactions with
16S RNA.";
J. Mol. Biol. 316:725-768(2002).
[16]
X-RAY CRYSTALLOGRAPHY (5.90 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH
RF1 OR RF2, AND SUBUNIT.
PubMed=16377566; DOI=10.1016/j.cell.2005.09.039;
Petry S., Brodersen D.E., Murphy F.V., Dunham C.M., Selmer M.,
Tarry M.J., Kelley A.C., Ramakrishnan V.;
"Crystal structures of the ribosome in complex with release factors
RF1 and RF2 bound to a cognate stop codon.";
Cell 123:1255-1266(2005).
[17]
X-RAY CRYSTALLOGRAPHY (3.45 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH
RF2, AND SUBUNIT.
PubMed=18988853; DOI=10.1126/science.1164840;
Weixlbaumer A., Jin H., Neubauer C., Voorhees R.M., Petry S.,
Kelley A.C., Ramakrishnan V.;
"Insights into translational termination from the structure of RF2
bound to the ribosome.";
Science 322:953-956(2008).
[18]
X-RAY CRYSTALLOGRAPHY (3.10 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH
RF2, AND SUBUNIT.
PubMed=20421507; DOI=10.1073/pnas.1003995107;
Jin H., Kelley A.C., Loakes D., Ramakrishnan V.;
"Structure of the 70S ribosome bound to release factor 2 and a
substrate analog provides insights into catalysis of peptide
release.";
Proc. Natl. Acad. Sci. U.S.A. 107:8593-8598(2010).
-!- FUNCTION: With S4 and S12 plays an important role in translational
accuracy. {ECO:0000250}.
-!- FUNCTION: Located at the back of the 30S subunit body where it
stabilizes the conformation of the head with respect to the body.
Binds mRNA in the 70S ribosome, positioning it for translation.
-!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts proteins S4
and S8.
-!- DOMAIN: The N-terminal domain interacts with the head of the 30S
subunit; the C-terminal domain interacts with the body and
contacts protein S4. The interaction surface between S4 and S5 is
involved in control of translational fidelity.
-!- MASS SPECTROMETRY: Mass=17428; Method=MALDI; Range=2-162;
Evidence={ECO:0000269|PubMed:16287167};
-!- MISCELLANEOUS: Is positioned such that it could physically
interact with spectinomycin.
-!- SIMILARITY: Belongs to the universal ribosomal protein uS5 family.
{ECO:0000305}.
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EMBL; AP008226; BAD71498.1; -; Genomic_DNA.
RefSeq; WP_008633389.1; NC_006461.1.
RefSeq; YP_144941.1; NC_006461.1.
PDB; 1FJG; X-ray; 3.00 A; E=1-162.
PDB; 1FKA; X-ray; 3.30 A; E=1-162.
PDB; 1HNW; X-ray; 3.40 A; E=1-162.
PDB; 1HNX; X-ray; 3.40 A; E=1-162.
PDB; 1HNZ; X-ray; 3.30 A; E=1-162.
PDB; 1HR0; X-ray; 3.20 A; E=1-162.
PDB; 1I94; X-ray; 3.20 A; E=2-162.
PDB; 1I95; X-ray; 4.50 A; E=2-162.
PDB; 1I96; X-ray; 4.20 A; E=2-162.
PDB; 1I97; X-ray; 4.50 A; E=2-162.
PDB; 1IBK; X-ray; 3.31 A; E=1-162.
PDB; 1IBL; X-ray; 3.11 A; E=1-162.
PDB; 1IBM; X-ray; 3.31 A; E=1-162.
PDB; 1J5E; X-ray; 3.05 A; E=2-162.
PDB; 1JGO; X-ray; 5.60 A; H=1-162.
PDB; 1JGP; X-ray; 7.00 A; H=1-162.
PDB; 1JGQ; X-ray; 5.00 A; H=1-162.
PDB; 1L1U; Model; -; E=5-154.
PDB; 1ML5; EM; 14.00 A; H=1-162.
PDB; 1N32; X-ray; 3.00 A; E=2-162.
PDB; 1N33; X-ray; 3.35 A; E=2-162.
PDB; 1N34; X-ray; 3.80 A; E=2-162.
PDB; 1N36; X-ray; 3.65 A; E=2-162.
PDB; 1QD7; X-ray; 5.50 A; D=22-130.
PDB; 1VVJ; X-ray; 3.44 A; QE/XE=1-162.
PDB; 1VY4; X-ray; 2.60 A; AE/CE=1-162.
PDB; 1VY5; X-ray; 2.55 A; AE/CE=1-162.
PDB; 1VY6; X-ray; 2.90 A; AE/CE=1-162.
PDB; 1VY7; X-ray; 2.80 A; AE/CE=1-162.
PDB; 1XMO; X-ray; 3.25 A; E=1-162.
PDB; 1XMQ; X-ray; 3.00 A; E=1-162.
PDB; 1XNQ; X-ray; 3.05 A; E=1-162.
PDB; 1XNR; X-ray; 3.10 A; E=1-162.
PDB; 2E5L; X-ray; 3.30 A; E=2-162.
PDB; 2F4V; X-ray; 3.80 A; E=1-162.
PDB; 2HHH; X-ray; 3.35 A; E=1-162.
PDB; 2UU9; X-ray; 3.10 A; E=2-162.
PDB; 2UUA; X-ray; 2.90 A; E=2-162.
PDB; 2UUB; X-ray; 2.80 A; E=2-162.
PDB; 2UUC; X-ray; 3.10 A; E=2-162.
PDB; 2UXB; X-ray; 3.10 A; E=2-162.
PDB; 2UXC; X-ray; 2.90 A; E=2-162.
PDB; 2UXD; X-ray; 3.20 A; E=2-162.
PDB; 2VQE; X-ray; 2.50 A; E=1-162.
PDB; 2VQF; X-ray; 2.90 A; E=1-162.
PDB; 2ZM6; X-ray; 3.30 A; E=2-162.
PDB; 3OTO; X-ray; 3.69 A; E=1-162.
PDB; 3T1H; X-ray; 3.11 A; E=1-162.
PDB; 3T1Y; X-ray; 2.80 A; E=1-162.
PDB; 4AQY; X-ray; 3.50 A; E=2-162.
PDB; 4B3M; X-ray; 2.90 A; E=2-162.
PDB; 4B3R; X-ray; 3.00 A; E=2-162.
PDB; 4B3S; X-ray; 3.15 A; E=2-162.
PDB; 4B3T; X-ray; 3.00 A; E=2-162.
PDB; 4DR1; X-ray; 3.60 A; E=1-162.
PDB; 4DR2; X-ray; 3.25 A; E=1-162.
PDB; 4DR3; X-ray; 3.35 A; E=1-162.
PDB; 4DR4; X-ray; 3.97 A; E=1-162.
PDB; 4DR5; X-ray; 3.45 A; E=1-162.
PDB; 4DR6; X-ray; 3.30 A; E=1-162.
PDB; 4DR7; X-ray; 3.75 A; E=1-162.
PDB; 4DUY; X-ray; 3.39 A; E=1-162.
PDB; 4DUZ; X-ray; 3.65 A; E=1-162.
PDB; 4DV0; X-ray; 3.85 A; E=1-162.
PDB; 4DV1; X-ray; 3.85 A; E=1-162.
PDB; 4DV2; X-ray; 3.65 A; E=1-162.
PDB; 4DV3; X-ray; 3.55 A; E=1-162.
PDB; 4DV4; X-ray; 3.65 A; E=1-162.
PDB; 4DV5; X-ray; 3.68 A; E=1-162.
PDB; 4DV6; X-ray; 3.30 A; E=1-162.
PDB; 4DV7; X-ray; 3.29 A; E=1-162.
PDB; 4GKJ; X-ray; 3.30 A; E=5-154.
PDB; 4GKK; X-ray; 3.20 A; E=5-154.
PDB; 4JI0; X-ray; 3.49 A; E=1-162.
PDB; 4JI1; X-ray; 3.14 A; E=1-162.
PDB; 4JI2; X-ray; 3.64 A; E=1-162.
PDB; 4JI3; X-ray; 3.35 A; E=1-162.
PDB; 4JI4; X-ray; 3.69 A; E=1-162.
PDB; 4JI5; X-ray; 3.85 A; E=1-162.
PDB; 4JI6; X-ray; 3.55 A; E=1-162.
PDB; 4JI7; X-ray; 3.50 A; E=1-162.
PDB; 4JI8; X-ray; 3.74 A; E=1-162.
PDB; 4JV5; X-ray; 3.16 A; E=5-154.
PDB; 4JYA; X-ray; 3.10 A; E=5-154.
PDB; 4K0K; X-ray; 3.40 A; E=5-155.
PDB; 4KHP; X-ray; 3.10 A; E=5-154.
PDB; 4L47; X-ray; 3.22 A; QE/XE=1-162.
PDB; 4L71; X-ray; 3.90 A; QE/XE=1-162.
PDB; 4LEL; X-ray; 3.90 A; QE/XE=1-162.
PDB; 4LF4; X-ray; 3.34 A; E=1-162.
PDB; 4LF5; X-ray; 3.75 A; E=1-162.
PDB; 4LF6; X-ray; 3.31 A; E=1-162.
PDB; 4LF7; X-ray; 3.15 A; E=1-162.
PDB; 4LF8; X-ray; 3.15 A; E=1-162.
PDB; 4LF9; X-ray; 3.28 A; E=1-162.
PDB; 4LFA; X-ray; 3.65 A; E=1-162.
PDB; 4LFB; X-ray; 3.01 A; E=1-162.
PDB; 4LFC; X-ray; 3.60 A; E=1-162.
PDB; 4LFZ; X-ray; 3.92 A; QE/XE=1-162.
PDB; 4LNT; X-ray; 2.94 A; QE/XE=1-162.
PDB; 4LSK; X-ray; 3.48 A; QE/XE=1-162.
PDB; 4LT8; X-ray; 3.14 A; QE/XE=1-162.
PDB; 4NXM; X-ray; 3.65 A; E=1-162.
PDB; 4NXN; X-ray; 3.54 A; E=1-162.
PDB; 4OX9; X-ray; 3.80 A; E=2-162.
PDB; 4P6F; X-ray; 3.60 A; QE/XE=1-162.
PDB; 4P70; X-ray; 3.68 A; QE/XE=1-162.
PDB; 4TUA; X-ray; 3.60 A; QE/XE=1-162.
PDB; 4TUB; X-ray; 3.60 A; QE/XE=1-162.
PDB; 4TUC; X-ray; 3.60 A; QE/XE=1-162.
PDB; 4TUD; X-ray; 3.60 A; QE/XE=1-162.
PDB; 4TUE; X-ray; 3.50 A; QE/XE=1-162.
PDB; 4V42; X-ray; 5.50 A; AH=1-162.
PDB; 4V49; X-ray; 8.70 A; E=5-154.
PDB; 4V4A; X-ray; 9.50 A; E=5-154.
PDB; 4V4G; X-ray; 11.50 A; E=5-154.
PDB; 4V4I; X-ray; 3.71 A; f=-.
PDB; 4V4P; X-ray; 5.50 A; BH=1-162.
PDB; 4V4R; X-ray; 5.90 A; AE=1-162.
PDB; 4V4S; X-ray; 6.76 A; AE=1-162.
PDB; 4V4T; X-ray; 6.46 A; AE=1-162.
PDB; 4V4X; X-ray; 5.00 A; AH=1-162.
PDB; 4V4Y; X-ray; 5.50 A; AH=1-162.
PDB; 4V4Z; X-ray; 4.51 A; AH=1-162.
PDB; 4V51; X-ray; 2.80 A; AE/CE=2-162.
PDB; 4V5A; X-ray; 3.50 A; AE/CE=2-162.
PDB; 4V5C; X-ray; 3.30 A; AE/CE=1-162.
PDB; 4V5D; X-ray; 3.50 A; AE/CE=1-162.
PDB; 4V5E; X-ray; 3.45 A; AE/CE=1-162.
PDB; 4V5F; X-ray; 3.60 A; AE/CE=1-162.
PDB; 4V5G; X-ray; 3.60 A; AE/CE=1-162.
PDB; 4V5J; X-ray; 3.10 A; AE/CE=1-162.
PDB; 4V5K; X-ray; 3.20 A; AE/CE=1-162.
PDB; 4V5L; X-ray; 3.10 A; AE=1-162.
PDB; 4V5M; EM; 7.80 A; AE=1-162.
PDB; 4V5N; EM; 7.60 A; AE=1-162.
PDB; 4V5P; X-ray; 3.10 A; AE/CE=1-162.
PDB; 4V5Q; X-ray; 3.10 A; AE/CE=1-162.
PDB; 4V5R; X-ray; 3.10 A; AE/CE=1-162.
PDB; 4V5S; X-ray; 3.10 A; AE/CE=1-162.
PDB; 4V68; EM; 6.40 A; AE=5-155.
PDB; 4V6A; X-ray; 3.10 A; AE/CE=1-162.
PDB; 4V6F; X-ray; 3.10 A; BH/CH=1-162.
PDB; 4V6G; X-ray; 3.50 A; AH/CH=1-162.
PDB; 4V7J; X-ray; 3.30 A; Ae/Be=1-162.
PDB; 4V7K; X-ray; 3.60 A; Ae/Be=1-162.
PDB; 4V7L; X-ray; 3.00 A; AE/CE=1-162.
PDB; 4V7M; X-ray; 3.45 A; AE/CE=1-162.
PDB; 4V7W; X-ray; 3.00 A; AE/CE=1-162.
PDB; 4V7X; X-ray; 3.00 A; AE/CE=1-160.
PDB; 4V7Y; X-ray; 3.00 A; AE/CE=1-162.
PDB; 4V7Z; X-ray; 3.10 A; AE/CE=1-162.
PDB; 4V87; X-ray; 3.10 A; BH/CH=1-162.
PDB; 4V8A; X-ray; 3.20 A; CE/DE=1-162.
PDB; 4V8B; X-ray; 3.00 A; AH/CH=1-162.
PDB; 4V8C; X-ray; 3.30 A; CH/DH=1-162.
PDB; 4V8D; X-ray; 3.00 A; AH/CH=1-162.
PDB; 4V8E; X-ray; 3.30 A; BH/DH=1-162.
PDB; 4V8F; X-ray; 3.30 A; BH/CH=1-162.
PDB; 4V8G; X-ray; 3.00 A; AE/CE=1-162.
PDB; 4V8H; X-ray; 3.10 A; AE/CE=1-162.
PDB; 4V8I; X-ray; 2.70 A; AE/CE=1-162.
PDB; 4V8J; X-ray; 3.90 A; AE/CE=1-162.
PDB; 4V8N; X-ray; 3.10 A; AE/CE=1-162.
PDB; 4V8O; X-ray; 3.80 A; AE=1-162.
PDB; 4V8Q; X-ray; 3.10 A; BE=1-162.
PDB; 4V8U; X-ray; 3.70 A; AE/CE=1-162.
PDB; 4V8X; X-ray; 3.35 A; AE/CE=1-162.
PDB; 4V90; X-ray; 2.95 A; AE=1-162.
PDB; 4V95; X-ray; 3.20 A; AE/CE=1-162.
PDB; 4V97; X-ray; 3.52 A; AE/CE=1-162.
PDB; 4V9A; X-ray; 3.30 A; AH/CH=1-162.
PDB; 4V9B; X-ray; 3.10 A; AH/CH=1-162.
PDB; 4V9H; X-ray; 2.86 A; AE=5-154.
PDB; 4V9I; X-ray; 3.30 A; AE/CE=5-154.
PDB; 4V9R; X-ray; 3.00 A; AE/CE=1-162.
PDB; 4V9S; X-ray; 3.10 A; AE/CE=1-162.
PDB; 4W2E; X-ray; 2.90 A; e=1-162.
PDB; 4W2F; X-ray; 2.40 A; AE/CE=1-162.
PDB; 4W2G; X-ray; 2.55 A; AE/CE=1-162.
PDB; 4W2H; X-ray; 2.70 A; AE/CE=1-162.
PDB; 4W2I; X-ray; 2.70 A; AE/CE=1-162.
PDB; 4W4G; X-ray; 3.30 A; QE/XE=1-162.
PDB; 4WPO; X-ray; 2.80 A; BE/DE=1-162.
PDB; 4WQ1; X-ray; 3.10 A; 42/4E=1-162.
PDB; 4WQF; X-ray; 2.80 A; BE/DE=1-162.
PDB; 4WQR; X-ray; 3.15 A; 42/4E=1-162.
PDB; 4WQU; X-ray; 2.80 A; BE/DE=1-162.
PDB; 4WQY; X-ray; 2.80 A; BE/DE=1-162.
PDB; 4WR6; X-ray; 3.05 A; 42/4E=1-162.
PDB; 4WRA; X-ray; 3.05 A; 42/4E=1-162.
PDB; 4WRO; X-ray; 3.05 A; 4E=1-162.
PDB; 4WSD; X-ray; 2.95 A; 42/4E=1-162.
PDB; 4WSM; X-ray; 3.30 A; 42/4E=1-162.
PDB; 4WT1; X-ray; 3.05 A; 42/4E=1-162.
PDB; 4WT8; X-ray; 3.40 A; AE/BE=5-154.
PDB; 4WU1; X-ray; 3.20 A; 42/4E=1-162.
PDB; 4WZD; X-ray; 3.10 A; 42/4E=1-162.
PDB; 4WZO; X-ray; 3.30 A; 42/4E=1-162.
PDB; 4X62; X-ray; 3.45 A; E=5-155.
PDB; 4X64; X-ray; 3.35 A; E=5-155.
PDB; 4X65; X-ray; 3.35 A; E=5-155.
PDB; 4X66; X-ray; 3.45 A; E=5-155.
PDB; 4Y4O; X-ray; 2.30 A; 1e/2e=1-162.
PDB; 4Y4P; X-ray; 2.50 A; 1e/2e=1-162.
PDB; 4YHH; X-ray; 3.42 A; E=5-161.
PDB; 4YPB; X-ray; 3.40 A; QE/XE=1-162.
PDB; 4YY3; X-ray; 3.60 A; E=1-162.
PDB; 4YZV; X-ray; 3.10 A; QE/XE=1-162.
PDB; 4Z3S; X-ray; 2.65 A; 1e/2e=1-162.
PDB; 4Z8C; X-ray; 2.90 A; 1e/2e=1-162.
PDB; 4ZER; X-ray; 3.10 A; 1e/2e=5-152.
PDB; 4ZSN; X-ray; 3.60 A; QE/XE=1-162.
PDB; 5A9Z; EM; 4.70 A; BI=5-154.
PDB; 5AA0; EM; 5.00 A; BI=5-154.
PDB; 5BR8; X-ray; 3.40 A; E=1-162.
PDB; 5CZP; X-ray; 3.30 A; QE/XE=1-162.
PDB; 5D8B; X-ray; 3.63 A; BC/FA=1-162.
PDB; 5DFE; X-ray; 3.10 A; QE/XE=1-162.
PDB; 5DOX; X-ray; 3.10 A; 1e/2e=1-162.
PDB; 5DOY; X-ray; 2.60 A; 1e/2e=1-162.
PDB; 5E7K; X-ray; 3.20 A; 42/4E=1-162.
PDB; 5E81; X-ray; 2.95 A; 42/4E=1-162.
PDB; 5EL4; X-ray; 3.15 A; 42/4E=1-162.
PDB; 5EL5; X-ray; 3.15 A; 42/4E=1-162.
PDB; 5EL6; X-ray; 3.10 A; 42/4E=1-162.
PDB; 5EL7; X-ray; 3.15 A; 42/4E=1-162.
PDB; 5F8K; X-ray; 2.80 A; 1e/2e=5-152.
PDB; 5FDU; X-ray; 2.90 A; 1e/2e=5-152.
PDB; 5FDV; X-ray; 2.80 A; 1e/2e=5-152.
PDB; 5HAU; X-ray; 3.00 A; 1e/2e=1-162.
PDB; 5HCP; X-ray; 2.89 A; 1e/2e=1-162.
PDB; 5HCQ; X-ray; 2.80 A; 1e/2e=1-162.
PDB; 5HCR; X-ray; 2.80 A; 1e/2e=1-162.
PDB; 5HD1; X-ray; 2.70 A; 1e/2e=1-162.
PDB; 5IB7; X-ray; 2.99 A; 42/4E=1-162.
PDB; 5IB8; X-ray; 3.13 A; 42/4E=1-162.
PDB; 5IBB; X-ray; 2.96 A; 42/4E=1-162.
PDB; 5IMQ; EM; 3.80 A; I=1-162.
PDB; 5IMR; EM; -; I=1-162.
PDB; 5IWA; X-ray; 3.50 A; E=5-161.
PDB; 5J30; X-ray; 3.20 A; QE/XE=1-162.
PDB; 5J3C; X-ray; 3.04 A; QE/XE=1-162.
PDB; 5J4B; X-ray; 2.60 A; 1e/2e=1-162.
PDB; 5J4C; X-ray; 2.80 A; 1e/2e=1-162.
PDB; 5J8B; X-ray; 2.60 A; e=1-162.
PDB; 5LMN; EM; 3.55 A; E=1-162.
PDB; 5LMO; EM; 4.30 A; E=1-162.
PDB; 5LMP; EM; 5.35 A; E=1-162.
PDB; 5LMQ; EM; 4.20 A; E=1-162.
PDB; 5LMR; EM; 4.45 A; E=1-162.
PDB; 5LMS; EM; 5.10 A; E=1-162.
PDB; 5LMT; EM; 4.15 A; E=1-162.
PDB; 5LMU; EM; 4.00 A; E=1-162.
PDB; 5LMV; EM; 4.90 A; E=1-162.
PDB; 5NDJ; X-ray; 3.15 A; 42/4E=1-162.
PDB; 5NDK; X-ray; 2.95 A; 42/4E=1-162.
PDB; 5OT7; EM; 3.80 A; D=5-155.
PDB; 5UQ7; EM; 3.50 A; e=5-152.
PDB; 5UQ8; EM; 3.20 A; e=5-152.
PDB; 5VP2; X-ray; 2.80 A; 1e/2e=1-162.
PDB; 5W4K; X-ray; 2.70 A; 1e/2e=1-162.
PDB; 5WIS; X-ray; 2.70 A; 1e/2e=1-162.
PDB; 5WIT; X-ray; 2.60 A; 1e/2e=1-162.
PDB; 5WNP; X-ray; 3.30 A; E=5-155.
PDB; 5WNQ; X-ray; 3.50 A; E=5-154.
PDB; 5WNR; X-ray; 3.50 A; E=5-154.
PDB; 5WNS; X-ray; 3.50 A; E=5-154.
PDB; 5WNT; X-ray; 3.30 A; E=5-155.
PDB; 5WNU; X-ray; 3.40 A; E=5-155.
PDB; 5WNV; X-ray; 3.30 A; E=5-155.
PDB; 5ZLU; EM; 3.60 A; K=1-162.
PDB; 6C5L; X-ray; 3.20 A; AE/CE=1-162.
PDB; 6CAE; X-ray; 2.60 A; 1e/2e=1-162.
PDB; 6CAO; X-ray; 3.45 A; E=5-155.
PDB; 6CAQ; X-ray; 3.40 A; E=5-154.
PDB; 6CAR; X-ray; 3.40 A; E=2-162.
PDB; 6CAS; X-ray; 3.50 A; E=2-162.
PDB; 6CFJ; X-ray; 2.80 A; 1e/2e=1-162.
PDB; 6CFK; X-ray; 2.70 A; 1e/2e=1-162.
PDB; 6CFL; X-ray; 2.60 A; 1e/2e=1-162.
PDB; 6FKR; X-ray; 3.20 A; 1e/2e=5-152.
PDB; 6GSJ; X-ray; 2.96 A; 42/4E=1-162.
PDB; 6GSK; X-ray; 3.36 A; 42/4E=1-162.
PDB; 6GSL; X-ray; 3.16 A; 42/4E=1-162.
PDBsum; 1FJG; -.
PDBsum; 1FKA; -.
PDBsum; 1HNW; -.
PDBsum; 1HNX; -.
PDBsum; 1HNZ; -.
PDBsum; 1HR0; -.
PDBsum; 1I94; -.
PDBsum; 1I95; -.
PDBsum; 1I96; -.
PDBsum; 1I97; -.
PDBsum; 1IBK; -.
PDBsum; 1IBL; -.
PDBsum; 1IBM; -.
PDBsum; 1J5E; -.
PDBsum; 1JGO; -.
PDBsum; 1JGP; -.
PDBsum; 1JGQ; -.
PDBsum; 1L1U; -.
PDBsum; 1ML5; -.
PDBsum; 1N32; -.
PDBsum; 1N33; -.
PDBsum; 1N34; -.
PDBsum; 1N36; -.
PDBsum; 1QD7; -.
PDBsum; 1VVJ; -.
PDBsum; 1VY4; -.
PDBsum; 1VY5; -.
PDBsum; 1VY6; -.
PDBsum; 1VY7; -.
PDBsum; 1XMO; -.
PDBsum; 1XMQ; -.
PDBsum; 1XNQ; -.
PDBsum; 1XNR; -.
PDBsum; 2E5L; -.
PDBsum; 2F4V; -.
PDBsum; 2HHH; -.
PDBsum; 2UU9; -.
PDBsum; 2UUA; -.
PDBsum; 2UUB; -.
PDBsum; 2UUC; -.
PDBsum; 2UXB; -.
PDBsum; 2UXC; -.
PDBsum; 2UXD; -.
PDBsum; 2VQE; -.
PDBsum; 2VQF; -.
PDBsum; 2ZM6; -.
PDBsum; 3OTO; -.
PDBsum; 3T1H; -.
PDBsum; 3T1Y; -.
PDBsum; 4AQY; -.
PDBsum; 4B3M; -.
PDBsum; 4B3R; -.
PDBsum; 4B3S; -.
PDBsum; 4B3T; -.
PDBsum; 4DR1; -.
PDBsum; 4DR2; -.
PDBsum; 4DR3; -.
PDBsum; 4DR4; -.
PDBsum; 4DR5; -.
PDBsum; 4DR6; -.
PDBsum; 4DR7; -.
PDBsum; 4DUY; -.
PDBsum; 4DUZ; -.
PDBsum; 4DV0; -.
PDBsum; 4DV1; -.
PDBsum; 4DV2; -.
PDBsum; 4DV3; -.
PDBsum; 4DV4; -.
PDBsum; 4DV5; -.
PDBsum; 4DV6; -.
PDBsum; 4DV7; -.
PDBsum; 4GKJ; -.
PDBsum; 4GKK; -.
PDBsum; 4JI0; -.
PDBsum; 4JI1; -.
PDBsum; 4JI2; -.
PDBsum; 4JI3; -.
PDBsum; 4JI4; -.
PDBsum; 4JI5; -.
PDBsum; 4JI6; -.
PDBsum; 4JI7; -.
PDBsum; 4JI8; -.
PDBsum; 4JV5; -.
PDBsum; 4JYA; -.
PDBsum; 4K0K; -.
PDBsum; 4KHP; -.
PDBsum; 4L47; -.
PDBsum; 4L71; -.
PDBsum; 4LEL; -.
PDBsum; 4LF4; -.
PDBsum; 4LF5; -.
PDBsum; 4LF6; -.
PDBsum; 4LF7; -.
PDBsum; 4LF8; -.
PDBsum; 4LF9; -.
PDBsum; 4LFA; -.
PDBsum; 4LFB; -.
PDBsum; 4LFC; -.
PDBsum; 4LFZ; -.
PDBsum; 4LNT; -.
PDBsum; 4LSK; -.
PDBsum; 4LT8; -.
PDBsum; 4NXM; -.
PDBsum; 4NXN; -.
PDBsum; 4OX9; -.
PDBsum; 4P6F; -.
PDBsum; 4P70; -.
PDBsum; 4TUA; -.
PDBsum; 4TUB; -.
PDBsum; 4TUC; -.
PDBsum; 4TUD; -.
PDBsum; 4TUE; -.
PDBsum; 4V42; -.
PDBsum; 4V49; -.
PDBsum; 4V4A; -.
PDBsum; 4V4G; -.
PDBsum; 4V4I; -.
PDBsum; 4V4P; -.
PDBsum; 4V4R; -.
PDBsum; 4V4S; -.
PDBsum; 4V4T; -.
PDBsum; 4V4X; -.
PDBsum; 4V4Y; -.
PDBsum; 4V4Z; -.
PDBsum; 4V51; -.
PDBsum; 4V5A; -.
PDBsum; 4V5C; -.
PDBsum; 4V5D; -.
PDBsum; 4V5E; -.
PDBsum; 4V5F; -.
PDBsum; 4V5G; -.
PDBsum; 4V5J; -.
PDBsum; 4V5K; -.
PDBsum; 4V5L; -.
PDBsum; 4V5M; -.
PDBsum; 4V5N; -.
PDBsum; 4V5P; -.
PDBsum; 4V5Q; -.
PDBsum; 4V5R; -.
PDBsum; 4V5S; -.
PDBsum; 4V68; -.
PDBsum; 4V6A; -.
PDBsum; 4V6F; -.
PDBsum; 4V6G; -.
PDBsum; 4V7J; -.
PDBsum; 4V7K; -.
PDBsum; 4V7L; -.
PDBsum; 4V7M; -.
PDBsum; 4V7W; -.
PDBsum; 4V7X; -.
PDBsum; 4V7Y; -.
PDBsum; 4V7Z; -.
PDBsum; 4V87; -.
PDBsum; 4V8A; -.
PDBsum; 4V8B; -.
PDBsum; 4V8C; -.
PDBsum; 4V8D; -.
PDBsum; 4V8E; -.
PDBsum; 4V8F; -.
PDBsum; 4V8G; -.
PDBsum; 4V8H; -.
PDBsum; 4V8I; -.
PDBsum; 4V8J; -.
PDBsum; 4V8N; -.
PDBsum; 4V8O; -.
PDBsum; 4V8Q; -.
PDBsum; 4V8U; -.
PDBsum; 4V8X; -.
PDBsum; 4V90; -.
PDBsum; 4V95; -.
PDBsum; 4V97; -.
PDBsum; 4V9A; -.
PDBsum; 4V9B; -.
PDBsum; 4V9H; -.
PDBsum; 4V9I; -.
PDBsum; 4V9R; -.
PDBsum; 4V9S; -.
PDBsum; 4W2E; -.
PDBsum; 4W2F; -.
PDBsum; 4W2G; -.
PDBsum; 4W2H; -.
PDBsum; 4W2I; -.
PDBsum; 4W4G; -.
PDBsum; 4WPO; -.
PDBsum; 4WQ1; -.
PDBsum; 4WQF; -.
PDBsum; 4WQR; -.
PDBsum; 4WQU; -.
PDBsum; 4WQY; -.
PDBsum; 4WR6; -.
PDBsum; 4WRA; -.
PDBsum; 4WRO; -.
PDBsum; 4WSD; -.
PDBsum; 4WSM; -.
PDBsum; 4WT1; -.
PDBsum; 4WT8; -.
PDBsum; 4WU1; -.
PDBsum; 4WZD; -.
PDBsum; 4WZO; -.
PDBsum; 4X62; -.
PDBsum; 4X64; -.
PDBsum; 4X65; -.
PDBsum; 4X66; -.
PDBsum; 4Y4O; -.
PDBsum; 4Y4P; -.
PDBsum; 4YHH; -.
PDBsum; 4YPB; -.
PDBsum; 4YY3; -.
PDBsum; 4YZV; -.
PDBsum; 4Z3S; -.
PDBsum; 4Z8C; -.
PDBsum; 4ZER; -.
PDBsum; 4ZSN; -.
PDBsum; 5A9Z; -.
PDBsum; 5AA0; -.
PDBsum; 5BR8; -.
PDBsum; 5CZP; -.
PDBsum; 5D8B; -.
PDBsum; 5DFE; -.
PDBsum; 5DOX; -.
PDBsum; 5DOY; -.
PDBsum; 5E7K; -.
PDBsum; 5E81; -.
PDBsum; 5EL4; -.
PDBsum; 5EL5; -.
PDBsum; 5EL6; -.
PDBsum; 5EL7; -.
PDBsum; 5F8K; -.
PDBsum; 5FDU; -.
PDBsum; 5FDV; -.
PDBsum; 5HAU; -.
PDBsum; 5HCP; -.
PDBsum; 5HCQ; -.
PDBsum; 5HCR; -.
PDBsum; 5HD1; -.
PDBsum; 5IB7; -.
PDBsum; 5IB8; -.
PDBsum; 5IBB; -.
PDBsum; 5IMQ; -.
PDBsum; 5IMR; -.
PDBsum; 5IWA; -.
PDBsum; 5J30; -.
PDBsum; 5J3C; -.
PDBsum; 5J4B; -.
PDBsum; 5J4C; -.
PDBsum; 5J8B; -.
PDBsum; 5LMN; -.
PDBsum; 5LMO; -.
PDBsum; 5LMP; -.
PDBsum; 5LMQ; -.
PDBsum; 5LMR; -.
PDBsum; 5LMS; -.
PDBsum; 5LMT; -.
PDBsum; 5LMU; -.
PDBsum; 5LMV; -.
PDBsum; 5NDJ; -.
PDBsum; 5NDK; -.
PDBsum; 5OT7; -.
PDBsum; 5UQ7; -.
PDBsum; 5UQ8; -.
PDBsum; 5VP2; -.
PDBsum; 5W4K; -.
PDBsum; 5WIS; -.
PDBsum; 5WIT; -.
PDBsum; 5WNP; -.
PDBsum; 5WNQ; -.
PDBsum; 5WNR; -.
PDBsum; 5WNS; -.
PDBsum; 5WNT; -.
PDBsum; 5WNU; -.
PDBsum; 5WNV; -.
PDBsum; 5ZLU; -.
PDBsum; 6C5L; -.
PDBsum; 6CAE; -.
PDBsum; 6CAO; -.
PDBsum; 6CAQ; -.
PDBsum; 6CAR; -.
PDBsum; 6CAS; -.
PDBsum; 6CFJ; -.
PDBsum; 6CFK; -.
PDBsum; 6CFL; -.
PDBsum; 6FKR; -.
PDBsum; 6GSJ; -.
PDBsum; 6GSK; -.
PDBsum; 6GSL; -.
ProteinModelPortal; Q5SHQ5; -.
SMR; Q5SHQ5; -.
STRING; 300852.TTHA1675; -.
DrugBank; DB08185; 2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE.
EnsemblBacteria; BAD71498; BAD71498; BAD71498.
GeneID; 3169827; -.
KEGG; ttj:TTHA1675; -.
PATRIC; fig|300852.9.peg.1645; -.
eggNOG; ENOG4108RA9; Bacteria.
eggNOG; COG0098; LUCA.
HOGENOM; HOG000072595; -.
KO; K02988; -.
OMA; KRGCGSW; -.
PhylomeDB; Q5SHQ5; -.
BioCyc; TTHE300852:G1GKC-1681-MONOMER; -.
EvolutionaryTrace; Q5SHQ5; -.
Proteomes; UP000000532; Chromosome.
GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
Gene3D; 3.30.230.10; -; 1.
HAMAP; MF_01307_B; Ribosomal_S5_B; 1.
InterPro; IPR000851; Ribosomal_S5.
InterPro; IPR005712; Ribosomal_S5_bac-type.
InterPro; IPR005324; Ribosomal_S5_C.
InterPro; IPR020568; Ribosomal_S5_D2-typ_fold.
InterPro; IPR014721; Ribosomal_S5_D2-typ_fold_subgr.
InterPro; IPR013810; Ribosomal_S5_N.
InterPro; IPR018192; Ribosomal_S5_N_CS.
PANTHER; PTHR13718; PTHR13718; 1.
Pfam; PF00333; Ribosomal_S5; 1.
Pfam; PF03719; Ribosomal_S5_C; 1.
SUPFAM; SSF54211; SSF54211; 1.
TIGRFAMs; TIGR01021; rpsE_bact; 1.
PROSITE; PS00585; RIBOSOMAL_S5; 1.
PROSITE; PS50881; S5_DSRBD; 1.
1: Evidence at protein level;
3D-structure; Complete proteome; Direct protein sequencing;
Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
rRNA-binding.
INIT_MET 1 1 Removed. {ECO:0000269|PubMed:7957245}.
CHAIN 2 162 30S ribosomal protein S5.
/FTId=PRO_0000131621.
DOMAIN 6 69 S5 DRBM.
STRAND 7 20 {ECO:0000244|PDB:2VQE}.
STRAND 23 35 {ECO:0000244|PDB:2VQE}.
STRAND 37 50 {ECO:0000244|PDB:2VQE}.
HELIX 51 62 {ECO:0000244|PDB:2VQE}.
STRAND 65 68 {ECO:0000244|PDB:2VQE}.
STRAND 72 75 {ECO:0000244|PDB:3T1Y}.
STRAND 80 84 {ECO:0000244|PDB:2VQE}.
STRAND 87 93 {ECO:0000244|PDB:2VQE}.
STRAND 96 98 {ECO:0000244|PDB:4B3S}.
STRAND 100 102 {ECO:0000244|PDB:2VQE}.
HELIX 104 111 {ECO:0000244|PDB:2VQE}.
TURN 112 114 {ECO:0000244|PDB:2VQE}.
STRAND 117 124 {ECO:0000244|PDB:2VQE}.
HELIX 128 141 {ECO:0000244|PDB:2VQE}.
HELIX 145 151 {ECO:0000244|PDB:2VQE}.
HELIX 154 156 {ECO:0000244|PDB:4YHH}.
TURN 157 159 {ECO:0000244|PDB:4YHH}.
SEQUENCE 162 AA; 17557 MW; BE3367CB619E68D2 CRC64;
MPETDFEEKM ILIRRTARMQ AGGRRFRFGA LVVVGDRQGR VGLGFGKAPE VPLAVQKAGY
YARRNMVEVP LQNGTIPHEI EVEFGASKIV LKPAAPGTGV IAGAVPRAIL ELAGVTDILT
KELGSRNPIN IAYATMEALR QLRTKADVER LRKGEAHAQA QG


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Tel 01 43 25 01 50

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GENTAUR GmbH
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Tel (408) 780-0908,
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Genprice Inc, Invoices and accounting
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GENTAUR Poland Sp. z o.o.


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