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35.8 kDa replicase (ORF 1) (ORF1) (Putative Rep protein (ORF1)) (Rep) (Rep protein) (Replicase) (Replicase protein) (Replication-associated protein)

 O93192_PCV2             Unreviewed;       314 AA.
O93192; Q77NR8;
01-NOV-1998, integrated into UniProtKB/TrEMBL.
01-NOV-1998, sequence version 1.
25-OCT-2017, entry version 115.
SubName: Full=35.8 kDa replicase {ECO:0000313|EMBL:AEC32997.1};
SubName: Full=ORF 1 {ECO:0000313|EMBL:AAG41226.1};
SubName: Full=ORF1 {ECO:0000313|EMBL:ACN24653.1};
SubName: Full=Putative Rep protein (ORF1) {ECO:0000313|EMBL:AAC35330.1};
SubName: Full=Rep {ECO:0000313|EMBL:ADG07986.1};
SubName: Full=Rep protein {ECO:0000313|EMBL:AAO24122.1, ECO:0000313|EMBL:ACK38054.1};
SubName: Full=Replicase {ECO:0000313|EMBL:AAP83611.1};
SubName: Full=Replicase protein {ECO:0000313|EMBL:AAO61136.1};
SubName: Full=Replication-associated protein {ECO:0000313|EMBL:ADE60775.1};
Name=Rep {ECO:0000313|EMBL:ADE60775.1};
Synonyms=ORF1 {ECO:0000313|EMBL:AAG41226.1},
rep {ECO:0000313|EMBL:AAF35304.1};
ORFNames=PCV2_gp1 {ECO:0000313|EMBL:AKC45442.1};
Porcine circovirus 2 (PCV2).
Viruses; ssDNA viruses; Circoviridae; Circovirus.
NCBI_TaxID=85708 {ECO:0000313|EMBL:AAC35330.1, ECO:0000313|Proteomes:UP000124612};
NCBI_TaxID=9823; Sus scrofa (Pig).
[1] {ECO:0000313|EMBL:AAC35330.1, ECO:0000313|Proteomes:UP000124612}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Porcine circovirus Type II {ECO:0000313|EMBL:AAC35330.1};
PubMed=9747726;
Meehan B.M., McNeilly F., Todd D., Kennedy S., Jewhurst V.A.,
Ellis J.A., Hassard L.E., Clark E.G., Haines D.M., Allan G.M.;
"Characterization of novel circovirus DNAs associated with wasting
syndromes in pigs.";
J. Gen. Virol. 79:2171-2179(1998).
[2] {ECO:0000313|EMBL:AAG41226.1}
NUCLEOTIDE SEQUENCE.
STRAIN=24657 NL {ECO:0000313|EMBL:AAG41226.1};
Wellenberg G.J., Pesch S., Berndsen F.W., Steverink P.J.G.M.,
Hunneman W., Van der Vorst T.J.K., Peperkamp N.H.M.T., Ohlinger V.F.,
Schippers R., Van Oirschot J.T., de Jong M.F.;
"Isolation and characterization of porcine circovirus type 2 from pigs
showing signs of post-weaning multisystemic wasting syndrome in The
Netherlands.";
Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:AAF35304.1, ECO:0000313|Proteomes:UP000144204}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=10653918; DOI=10.1016/S0168-1702(99)00122-7;
Mankertz A., Domingo M., Folch J.M., LeCann P., Jestin A., Segales J.,
Chmielewicz B., Plana-Duran J., Soike D.;
"Characterisation of PCV-2 isolates from Spain, Germany and France.";
Virus Res. 66:65-77(2000).
[4] {ECO:0000313|EMBL:AAN06826.1, ECO:0000313|Proteomes:UP000145381}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=BJ-HB {ECO:0000313|EMBL:AAN06826.1};
Wang Z., Yang H., Guo X., Lu Y.;
"Nucleotide sequencing and analysis of a new strain, BJ-HB, of porcine
circovirus type 2 from China.";
Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases.
[5] {ECO:0000313|EMBL:AAN81597.1, ECO:0000313|Proteomes:UP000109231}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Wang Z., Yang H., Guo X.;
"A new strain of Porcine circovirus type 2 isolated from Guangdong.";
Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases.
[6] {ECO:0000313|EMBL:AAQ94092.1}
NUCLEOTIDE SEQUENCE.
STRAIN=304 {ECO:0000313|EMBL:AAQ94092.1}, and
375 {ECO:0000313|EMBL:AAQ94098.1};
PubMed=14680067;
Dan A., Molnar T., Biksi I., Glavits R., Shaheim M., Harrach B.;
"Characterisation of Hungarian porcine circovirus 2 genomes associated
with PMWS and PDNS cases.";
Acta Vet. Hung. 51:551-562(2003).
[7] {ECO:0000313|EMBL:AAO61136.1, ECO:0000313|Proteomes:UP000129242}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=HZ0202 {ECO:0000313|EMBL:AAO61136.1};
Zhou J.Y., Chen Q.X., Ye J.X., Wang J.Y., Chen J.G., Chen W.J.,
Zheng X.J.;
"Complete genome of PCV-2 strain HZ0202 isolated from sows with
various clinical syndrome.";
Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|Proteomes:UP000106332, ECO:0000313|Proteomes:UP000106591, ECO:0000313|Proteomes:UP000109631}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Fd1 {ECO:0000313|EMBL:AAP83627.1},
Fd10 {ECO:0000313|EMBL:AAP83609.1},
Fd11 {ECO:0000313|EMBL:AAP83603.1},
Fd12 {ECO:0000313|EMBL:AAP83605.1}, Fd2 {ECO:0000313|EMBL:AAP83625.1},
Fd3 {ECO:0000313|EMBL:AAP83595.1}, Fd5 {ECO:0000313|EMBL:AAP83621.1},
Fd6 {ECO:0000313|EMBL:AAP83623.1}, Fd7 {ECO:0000313|EMBL:AAP83607.1},
Fd8 {ECO:0000313|EMBL:AAP83617.1}, Fd9 {ECO:0000313|EMBL:AAP83619.1},
Fh15 {ECO:0000313|EMBL:AAP83611.1},
Fh16 {ECO:0000313|EMBL:AAP83613.1},
Fh21 {ECO:0000313|EMBL:AAP83629.1},
Fh22 {ECO:0000313|EMBL:AAP83631.1}, and
Fh23 {ECO:0000313|EMBL:AAP83615.1};
PubMed=14769887; DOI=10.1099/vir.0.19536-0;
de Boisseson C., Beven V., Bigarre L., Thiery R., Rose N., Eveno E.,
Madec F., Jestin A.;
"Molecular characterization of Porcine circovirus type 2 isolates from
post-weaning multisystemic wasting syndrome-affected and non-affected
pigs.";
J. Gen. Virol. 85:293-304(2004).
[9] {ECO:0000313|Proteomes:UP000104396, ECO:0000313|Proteomes:UP000117543, ECO:0000313|Proteomes:UP000121006}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=NL_Control_2 {ECO:0000313|EMBL:AAS65977.1},
NL_Control_3 {ECO:0000313|EMBL:AAS65979.1},
NL_Control_5 {ECO:0000313|EMBL:AAS65983.1},
NL_Control_6 {ECO:0000313|EMBL:AAS65985.1},
NL_PMWS_1 {ECO:0000313|EMBL:AAS65987.1},
NL_PMWS_3 {ECO:0000313|EMBL:AAS65991.1}, and
NL_PMWS_4 {ECO:0000313|EMBL:AAS65993.1};
PubMed=15276779; DOI=10.1016/j.rvsc.2004.04.008;
Grierson S.S., King D.P., Wellenberg G.J., Banks M.;
"Genome sequence analysis of 10 Dutch porcine circovirus type 2 (PCV-
2) isolates from a PMWS case-control study.";
Res. Vet. Sci. 77:265-268(2004).
[10] {ECO:0000313|EMBL:AAS45843.1, ECO:0000313|Proteomes:UP000122169, ECO:0000313|Proteomes:UP000166801}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=HuZhou0301 {ECO:0000313|EMBL:AAS45844.1}, and
SX0201 {ECO:0000313|EMBL:AAS45843.1};
Zhou J.Y., Chen Q.X., Ye J.X., Chen T.F., Li Z.K., Sheng H.G.,
Shang S.B.;
"Complete genome of PCV2 strains isolated from pigs with wasting
syndrome.";
Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
[11] {ECO:0000313|EMBL:AAT39479.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SX04 {ECO:0000313|EMBL:AAT39479.1};
Li L., Ma Y., Yu L.;
"Cloning and analysis of full-length genome porcine circovirus 2.";
Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
[12] {ECO:0000313|EMBL:AAU87505.1, ECO:0000313|Proteomes:UP000116570, ECO:0000313|Proteomes:UP000125776}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=BL {ECO:0000313|EMBL:AAU87505.1}, and
DG {ECO:0000313|EMBL:AAU87511.1};
Wang X.W., Bi Y.Z., Cao Y.C., Tian C.J., Ma J.Y.;
"The genomic sequence analysis of porcine circovirus type 2 isolated
in Guangdong.";
Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
[13] {ECO:0000313|EMBL:AAO39760.1, ECO:0000313|Proteomes:UP000129949}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=HZ0201 {ECO:0000313|EMBL:AAO39760.1};
PubMed=15964652; DOI=10.1016/j.jbiotec.2005.02.017;
Zhou J.Y., Shang S.B., Gong H., Chen Q.X., Wu J.X., Shen H.G.,
Chen T.F., Guo J.Q.;
"In vitro expression, monoclonal antibody and bioactivity for capsid
protein of porcine circovirus type II without nuclear localization
signal.";
J. Biotechnol. 118:201-211(2005).
[14] {ECO:0000313|EMBL:AAY34249.1, ECO:0000313|Proteomes:UP000104965}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Henan {ECO:0000313|EMBL:AAY34249.1};
Liu X.W., Cao S.B., Guo D.C., Chen H.C., Yao Q.X.;
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
[15] {ECO:0000313|EMBL:ABB29419.1, ECO:0000313|Proteomes:UP000130435}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=FMV05-7539 {ECO:0000313|EMBL:ABB29419.1};
Tremblay D., Fontaine G., Harel J., Elahi M.S., Gagnon C.A.;
"Genetic characterization of Porcine circovirus type 2 from pigs
showing signs of post-weaning multisystemic wasting syndrome.";
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
[16] {ECO:0000313|EMBL:ABI17523.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Am16 {ECO:0000313|EMBL:ABI17523.1},
Am22 {ECO:0000313|EMBL:ABI17525.1}, and
Am9 {ECO:0000313|EMBL:ABI17531.1};
Castro A.M.M.G., Cortez A., Heinemann M.B., Brandao P.E.,
Richtzenhain L.J.;
"Porcine circovirus type 2 (PCV2) of Brazilian isolates: detection and
characterization.";
Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
[17] {ECO:0000313|EMBL:ABB20934.1, ECO:0000313|Proteomes:UP000148430}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ROM {ECO:0000313|EMBL:ABB20934.1};
PubMed=17385564;
Cadar D., Csagola A., Dan A., Deim Z., Spinu M., Miclaus V.,
Kobolkuti L., Czirjak G., Tuboly T.;
"Porcine circovirus type 2 and associated diseases in Romania--short
communication.";
Acta Vet. Hung. 55:151-156(2007).
[18] {ECO:0000313|EMBL:ABQ10603.1}
NUCLEOTIDE SEQUENCE.
STRAIN=MN-R13 {ECO:0000313|EMBL:ABQ10604.1}, and
MN-R4 {ECO:0000313|EMBL:ABQ10603.1};
Lyoo K., Kim H., Joo H.;
"Genetic characteristics of porcine circovirus 2 isolates from pigs in
farms with or without clinical post-weaning multi-systemic wasting
syndrome.";
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases.
[19] {ECO:0000313|EMBL:ABP48089.1, ECO:0000313|Proteomes:UP000148313}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Huanan-12 {ECO:0000313|EMBL:ABP48089.1};
Jiang Z.Y., Sun L.H., Song C.X.;
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
[20] {ECO:0000313|EMBL:ABP48087.1, ECO:0000313|Proteomes:UP000108111}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Huanan-11 {ECO:0000313|EMBL:ABP48087.1};
Song C.X., Sun L.H., Jiang Z.Y.;
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
[21] {ECO:0000313|EMBL:ABP48083.1, ECO:0000313|Proteomes:UP000136032}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Huanan-9 {ECO:0000313|EMBL:ABP48083.1};
Song C.X., Sun L.H., Hao Y.Q., Jiang Z.Y.;
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
[22] {ECO:0000313|EMBL:ABQ51918.1, ECO:0000313|Proteomes:UP000128090}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=HLJ2 {ECO:0000313|EMBL:ABQ51918.1};
Luo Y.J., Zhang G.H., Chen J.H., Liao M.;
"Sequence clone complete genome of porcine circovirus (PCV2).";
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases.
[23] {ECO:0000313|EMBL:ABV21957.1, ECO:0000313|Proteomes:UP000102800}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=GXHZ-5 {ECO:0000313|EMBL:ABV21957.1};
Huang W.-J., Xie L.-H., Yin Y.-S., Zhang N.;
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
[24] {ECO:0000313|EMBL:ABY82488.1, ECO:0000313|Proteomes:UP000137657}
NUCLEOTIDE SEQUENCE.
STRAIN=JH0602 {ECO:0000313|EMBL:ABY82498.1}, and
TZ0601 {ECO:0000313|EMBL:ABY82488.1};
Zhou Y.J., Xing G., Zhang X.;
"Direct Submission.";
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases.
[25] {ECO:0000313|EMBL:ABY21529.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PCV2-SJ {ECO:0000313|EMBL:ABY21529.1};
Wei W.;
"Sequence analysis of Porcine circovirus type 2 from pigs in China.";
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases.
[26] {ECO:0000313|EMBL:ABQ10603.1, ECO:0000313|Proteomes:UP000110893, ECO:0000313|Proteomes:UP000133719}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=MN-R13 {ECO:0000313|EMBL:ABQ10604.1}, and
MN-R4 {ECO:0000313|EMBL:ABQ10603.1};
PubMed=18460613;
Lyoo K.S., Kim H.B., Joo H.S.;
"Evaluation of a nested polymerase chain reaction assay to
differentiate between two genotypes of Porcine circovirus-2.";
J. Vet. Diagn. Invest. 20:283-288(2008).
[27] {ECO:0000313|Proteomes:UP000109848, ECO:0000313|Proteomes:UP000121324, ECO:0000313|Proteomes:UP000164805}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=DK444case {ECO:0000313|EMBL:ABU55974.1},
DK455case {ECO:0000313|EMBL:ABU55978.1},
DK475case {ECO:0000313|EMBL:ABU55984.1},
DK544control {ECO:0000313|EMBL:ABU55992.1}, and
DK575control {ECO:0000313|EMBL:ABU55996.1};
PubMed=17996404; DOI=10.1016/j.vetmic.2007.09.016;
Dupont K., Nielsen E.O., Baekbo P., Larsen L.E.;
"Genomic analysis of PCV2 isolates from Danish archives and a current
PMWS case-control study supports a shift in genotypes with time.";
Vet. Microbiol. 128:56-64(2008).
[28] {ECO:0000313|EMBL:ACN24651.1, ECO:0000313|Proteomes:UP000124251, ECO:0000313|Proteomes:UP000134044}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=QZ05 {ECO:0000313|EMBL:ACN24651.1}, and
SD05 {ECO:0000313|EMBL:ACN24653.1};
Zhao H., Fan W., Jiang P., Li X., Huang B.;
"Analysis of complete genomes of PCV2 in pigs with and without PMWS.";
Zhongguo Shou Yi Xue Bao 28:350-353(2008).
[29] {ECO:0000313|Proteomes:UP000104341, ECO:0000313|Proteomes:UP000112519, ECO:0000313|Proteomes:UP000143421}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=DaFeng0609 {ECO:0000313|EMBL:ACA49858.1},
HuaiAn0609 {ECO:0000313|EMBL:ACA49862.1},
Taizhou0512 {ECO:0000313|EMBL:ACA49868.1}, and
TianChang0603 {ECO:0000313|EMBL:ACA49870.1};
Wang H., Gao S., Liu X.;
"Analysis of the genomes of 10 epidemic isolates of Porcine circovirus
type 2.";
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
[30] {ECO:0000313|Proteomes:UP000101167, ECO:0000313|Proteomes:UP000106144, ECO:0000313|Proteomes:UP000106745}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K13 {ECO:0000313|EMBL:ACA51559.1},
K349 {ECO:0000313|EMBL:ACA51547.1},
K368-2 {ECO:0000313|EMBL:ACA51549.1},
K368-3 {ECO:0000313|EMBL:ACA51551.1}, and
K398 {ECO:0000313|EMBL:ACA51557.1};
Kim H.-H., Park S.-I., Hyun B.-H., Park S.-J., Jeong Y.-J.,
Chun Y.-H., Lee B.-J., Kang M.-I., Cho K.-O.;
"Genetic diversity of porcine circovirus type 2 in Korean pigs with
postweaning multisystemic wasting syndrome during 2005-2007.";
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
[31] {ECO:0000313|EMBL:ACB30103.1}
NUCLEOTIDE SEQUENCE.
STRAIN=GS01 {ECO:0000313|EMBL:ACB30103.1};
Chen H.T.;
"Genomic sequence of PCV2.";
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
[32] {ECO:0000313|Proteomes:UP000101539, ECO:0000313|Proteomes:UP000134138, ECO:0000313|Proteomes:UP000164690}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Vos 19015/06 {ECO:0000313|EMBL:ACB38248.1},
Vos 26890/06 {ECO:0000313|EMBL:ACB38254.1},
Vos 41178/06 {ECO:0000313|EMBL:ACB38246.1},
Vos 6630-31/07 {ECO:0000313|EMBL:ACB38238.1},
Vos 6869-70/06 {ECO:0000313|EMBL:ACB38252.1},
Vos 6908/07 {ECO:0000313|EMBL:ACB38244.1}, and
Vos 8177-79/06 {ECO:0000313|EMBL:ACB38250.1};
Dirbakova Z., Mojzis M.;
"Occurrence of the Porcine circovirus 2 (PCV2) in pigs during years
2006-2007 in Slovakia.";
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
[33] {ECO:0000313|EMBL:ACK38054.1, ECO:0000313|Proteomes:UP000120375}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Ii9f {ECO:0000313|EMBL:ACK38054.1};
PubMed=19365602; DOI=10.1007/s00705-009-0379-8;
Lefebvre D.J., Van Doorsselaere J., Delputte P.L., Nauwynck H.J.;
"Recombination of two porcine circovirus type 2 strains.";
Arch. Virol. 154:875-879(2009).
[34] {ECO:0000313|EMBL:ABY82498.1, ECO:0000313|Proteomes:UP000125189}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=JH0602 {ECO:0000313|EMBL:ABY82498.1};
PubMed=19059648; DOI=10.1016/j.molimm.2008.10.028;
Shang S.B., Jin Y.L., Jiang X.T., Zhou J.Y., Zhang X., Xing G.,
He J.L., Yan Y.;
"Fine mapping of antigenic epitopes on capsid proteins of porcine
circovirus, and antigenic phenotype of porcine circovirus type 2.";
Mol. Immunol. 46:327-334(2009).
[35] {ECO:0000313|EMBL:ACS37568.1, ECO:0000313|Proteomes:UP000116475, ECO:0000313|Proteomes:UP000163826}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=2351-1 {ECO:0000313|EMBL:ACS37574.1}, and
C7155 {ECO:0000313|EMBL:ACS37568.1};
PubMed=19693660; DOI=10.1007/s11262-009-0395-5;
Kim H.K., Luo Y., Moon H.J., Park S.J., Keum H.O., Rho S., Park B.K.;
"Phylogenetic and recombination analysis of genomic sequences of PCV2
isolated in Korea.";
Virus Genes 39:352-358(2009).
[36] {ECO:0000313|Proteomes:UP000122694, ECO:0000313|Proteomes:UP000123450, ECO:0000313|Proteomes:UP000166506}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=BJ0402 {ECO:0000313|EMBL:ABP68617.1},
GD-TS {ECO:0000313|EMBL:AAO24122.1},
GS04 {ECO:0000313|EMBL:ABP68619.1}, and
HB05 {ECO:0000313|EMBL:ABP68641.1};
PubMed=19540280; DOI=10.1016/j.virusres.2009.05.015;
Wang F., Guo X., Ge X., Wang Z., Chen Y., Cha Z., Yang H.;
"Genetic variation analysis of Chinese strains of porcine circovirus
type 2.";
Virus Res. 145:151-156(2009).
[37] {ECO:0000313|EMBL:ACN24651.1}
NUCLEOTIDE SEQUENCE.
STRAIN=QZ05 {ECO:0000313|EMBL:ACN24651.1}, and
SD05 {ECO:0000313|EMBL:ACN24653.1};
Zhao H., Li W., Jiang P.;
Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases.
[38] {ECO:0000313|EMBL:ACR47968.1}
NUCLEOTIDE SEQUENCE.
STRAIN=ShDNY-PCV2 {ECO:0000313|EMBL:ACR47968.1};
Yang S.L., Yin S.H., Lin F., Shang Y.J., Liu X.T.;
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases.
[39] {ECO:0000313|EMBL:ACS37568.1}
NUCLEOTIDE SEQUENCE.
STRAIN=2351-1 {ECO:0000313|EMBL:ACS37574.1}, and
C7155 {ECO:0000313|EMBL:ACS37568.1};
Park B., Luo Y., Kim H.;
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases.
[40] {ECO:0000313|EMBL:ACV32385.1}
NUCLEOTIDE SEQUENCE.
STRAIN=DBN-SD03 {ECO:0000313|EMBL:ACV32385.1};
Zhao J., Xing H.;
"Porcine circovirus 2 ORF1 and ORF2, isolates from North China.";
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases.
[41] {ECO:0000313|EMBL:AER42561.1, ECO:0000313|Proteomes:UP000120839}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=HUN {ECO:0000313|EMBL:AER42561.1};
Zhao G.-H., Cheng W., Zhang P.J., Han Y.S., Chen D.K.;
"Novel genotypes of type 2 Porcine circovirus (PCV2) in PMWS pigs in
China between 2008 and 2009.";
J Anim Vet Adv 9:3083-3091(2010).
[42] {ECO:0000313|EMBL:ABJ98317.1, ECO:0000313|Proteomes:UP000140316, ECO:0000313|Proteomes:UP000168378}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=15/23R {ECO:0000313|EMBL:ABJ98319.1}, and
15/5P {ECO:0000313|EMBL:ABJ98317.1};
PubMed=19917510; DOI=10.1016/j.rvsc.2009.10.006;
Dezen D., Rijsewijk F.A., Teixeira T.F., Holz C.L., Cibulski S.P.,
Franco A.C., Dellagostin O.A., Roehe P.M.;
"Multiply-primed rolling-circle amplification (MPRCA) of PCV2 genomes:
applications on detection, sequencing and virus isolation.";
Res. Vet. Sci. 88:436-440(2010).
[43] {ECO:0000313|EMBL:ACR47968.1, ECO:0000313|Proteomes:UP000132242}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ShDNY-PCV2 {ECO:0000313|EMBL:ACR47968.1};
PubMed=20646322;
Yin S., Sun S., Yang S., Shang Y., Cai X., Liu X.;
"Self-assembly of virus-like particles of porcine circovirus type 2
capsid protein expressed from Escherichia coli.";
Virol. J. 7:166-166(2010).
[44] {ECO:0000313|Proteomes:UP000126034, ECO:0000313|Proteomes:UP000140306, ECO:0000313|Proteomes:UP000142148}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=AS {ECO:0000313|EMBL:ADG07986.1},
JS {ECO:0000313|EMBL:ADG08002.1}, QTH {ECO:0000313|EMBL:ADG08006.1},
and YJ {ECO:0000313|EMBL:ADG08018.1};
PubMed=20955622;
Guo L.J., Lu Y.H., Wei Y.W., Huang L.P., Liu C.M.;
"Porcine circovirus type 2 (PCV2): genetic variation and newly
emerging genotypes in China.";
Virol. J. 7:273-273(2010).
[45] {ECO:0000313|EMBL:ADF28559.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=HN0907 {ECO:0000313|EMBL:ADF28559.1};
Song X., Zheng J., Xing H.;
"Epidemiologic investigation for Porcine circovirus type 2.";
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases.
[46] {ECO:0000313|EMBL:ADF87511.1, ECO:0000313|Proteomes:UP000150229}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Shandong {ECO:0000313|EMBL:ADF87511.1};
Yang S., Yin S., Shang Y., Liu X.;
"Genetic variation and phylogenetic analyses of porcine circovirus
type 2 isolates from Shandong and Hebei, China in 2009.";
Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
[47] {ECO:0000313|EMBL:ADG07986.1}
NUCLEOTIDE SEQUENCE.
STRAIN=AS {ECO:0000313|EMBL:ADG07986.1},
JS {ECO:0000313|EMBL:ADG08002.1}, QTH {ECO:0000313|EMBL:ADG08006.1},
and YJ {ECO:0000313|EMBL:ADG08018.1};
Liu C., Guo L., Wei Y., Huang L., Lu Y.;
Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
[48] {ECO:0000313|Proteomes:UP000104711, ECO:0000313|Proteomes:UP000119698, ECO:0000313|Proteomes:UP000162189}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CH2 {ECO:0000313|EMBL:AEN03301.1},
ML2 {ECO:0000313|EMBL:AEN03297.1}, ML3 {ECO:0000313|EMBL:AEN03305.1},
and TP {ECO:0000313|EMBL:AEN03309.1};
Wang C., Lee F., Huang T.-S., Chang W.-M., Lin Y.-L., Lai S.-S.,
Jeng C.-R., Pang F.V., Hsiao S.-H.V.;
Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases.
[49] {ECO:0000313|EMBL:AEJ87867.1, ECO:0000313|Proteomes:UP000114788}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=177-07-21 {ECO:0000313|EMBL:AEJ87867.1};
Novosel D., Lipej Z., Vojta L., Vojta A.;
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
[50] {ECO:0000313|Proteomes:UP000112290, ECO:0000313|Proteomes:UP000117409, ECO:0000313|Proteomes:UP000122586}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=1313-09-10 {ECO:0000313|EMBL:AEJ87881.1},
1313-09-11 {ECO:0000313|EMBL:AEJ87883.1},
161-08-2 {ECO:0000313|EMBL:AEJ87863.1},
168-08-6 {ECO:0000313|EMBL:AEJ87865.1},
255-08 {ECO:0000313|EMBL:AEJ87873.1},
70-08-2 {ECO:0000313|EMBL:AEJ87853.1}, and
930-09-1 {ECO:0000313|EMBL:AEJ87879.1};
Novosel D., Lipej Z., Tuboly T.;
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
[51] {ECO:0000313|Proteomes:UP000114460, ECO:0000313|Proteomes:UP000124880, ECO:0000313|Proteomes:UP000154620}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=PT-10810-10 {ECO:0000313|EMBL:AEC33042.1},
PT-20750-07 {ECO:0000313|EMBL:AEC32997.1},
PT-26633-09 {ECO:0000313|EMBL:AEC33036.1}, and
PT-42034-05 {ECO:0000313|EMBL:AEC33009.1};
PubMed=21925289; DOI=10.1016/j.meegid.2011.08.023;
Henriques A.M., Duarte M., Fagulha T., Ramos F., Barros S.C., Luis T.,
Fevereiro M.;
"Molecular study of porcine circovirus type 2 circulating in
Portugal.";
Infect. Genet. Evol. 11:2162-2172(2011).
[52] {ECO:0000313|EMBL:ADE60775.1, ECO:0000313|Proteomes:UP000100993, ECO:0000313|Proteomes:UP000112970}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=2-05 {ECO:0000313|EMBL:ADE60775.1}, and
2-PPL {ECO:0000313|EMBL:ADE60781.1};
PubMed=20580978; DOI=10.1016/j.rvsc.2010.04.022;
Vlasakova M., Jackova A., Vilcek S.;
"Genetic typing of porcine circovirus type 2 (PCV-2) isolates from
Slovakia.";
Res. Vet. Sci. 90:168-173(2011).
[53] {ECO:0000313|EMBL:CBK52356.1, ECO:0000313|Proteomes:UP000139372, ECO:0000313|Proteomes:UP000141912}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Holguin 246 {ECO:0000313|EMBL:CBK52356.1}, and
Matanzas 05 {ECO:0000313|EMBL:CBK52357.1};
PubMed=21507587; DOI=10.1016/j.vetmic.2011.03.022;
Perez L.J., de Arce H.D., Cortey M., Dominguez P., Percedo M.I.,
Perera C.L., Tarradas J., Frias M.T., Segales J., Ganges L.,
Nunez J.I.;
"Phylogenetic networks to study the origin and evolution of porcine
circovirus type 2 (PCV2) in Cuba.";
Vet. Microbiol. 151:245-254(2011).
[54] {ECO:0000313|EMBL:AEP02616.1, ECO:0000313|Proteomes:UP000120658}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=2b {ECO:0000313|EMBL:AEP02616.1};
PubMed=21890163; DOI=10.1016/j.virol.2011.08.004;
Guo L., Lu Y., Wei Y., Huang L., Wu H., Liu C.;
"Porcine circovirus genotype 2a (PCV2a) and genotype 2b (PCV2b)
recombinant mutants showed significantly enhanced viral replication
and altered antigenicity in vitro.";
Virology 419:57-63(2011).
[55] {ECO:0000313|EMBL:AEP02616.1}
NUCLEOTIDE SEQUENCE.
STRAIN=2b {ECO:0000313|EMBL:AEP02616.1};
Liu C.M., Guo L.J., Lu Y.H., Wei Y.W., Huang L.P.;
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases.
[56] {ECO:0000313|EMBL:AFU51459.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BG0-5 {ECO:0000313|EMBL:AFU51469.1},
Han0-4 {ECO:0000313|EMBL:AFU51459.1},
HB1-1 {ECO:0000313|EMBL:AFU51461.1}, and
HB2 {ECO:0000313|EMBL:AFU51481.1};
Huynh T.M.L., Nguyen B.H., Nguyen V.G., Dang H.A., Mai T.N.,
Tran T.H.G., Ngo M.H., Le V.T., Vu T.N., Ta T.K.C., Vo V.H., Kim H.K.,
Park B.K.;
Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
[57] {ECO:0000313|Proteomes:UP000102042, ECO:0000313|Proteomes:UP000143336, ECO:0000313|Proteomes:UP000166820}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=NIVS-3 {ECO:0000313|EMBL:AEA50969.1},
NIVS-5 {ECO:0000313|EMBL:AEA50971.1}, and
NIVS-6 {ECO:0000313|EMBL:AEA50973.1};
PubMed=21964944; DOI=10.1007/s00705-011-1130-9;
Savic B., Milicevic V., Jakic-Dimic D., Bojkovski J., Prodanovic R.,
Kureljusic B., Potkonjak A., Savic B.;
"Genetic characterization and phylogenetic analysis of porcine
circovirus type 2 (PCV2) in Serbia.";
Arch. Virol. 157:21-28(2012).
[58] {ECO:0000313|Proteomes:UP000170057}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=22289963;
Nguyen V.G., Kim H.K., Moon H.J., Park S.J., Keum H.O., Rho S.,
Han J.Y., Park B.K.;
"Population dynamics and ORF3 gene evolution of porcine circovirus
type 2 circulating in Korea.";
Arch. Virol. 157:799-810(2012).
[59] {ECO:0000313|EMBL:AEL89151.1}
NUCLEOTIDE SEQUENCE.
STRAIN=A5295 {ECO:0000313|EMBL:AEL89151.1};
Nguyen V.G., Kim H.K., Moon H.J., Park S.J., Keum H.O., Rho S.,
Han J.Y., Park B.K.;
"Population dynamics and ORF3 gene evolution of porcine circovirus
type 2 circulating in Korea.";
Arch. Virol. 0:0-0(2012).
[60] {ECO:0000313|EMBL:ACU44720.1, ECO:0000313|Proteomes:UP000160268}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SH07210 {ECO:0000313|EMBL:ACU44720.1};
Zhai S.L., Chen S.N., Zhang J.W., Wei Z.Z., Long J.X., Yuan S.S.,
Wei W.K., Chen Q.L., Xuan H., Wu D.C.;
"Dissection of the Possible Routes on Porcine Circoviruses Infecting
Human.";
J Anim Vet Adv 11:1281-1286(2012).
[61] {ECO:0000313|EMBL:AFM31239.1, ECO:0000313|Proteomes:UP000108312}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CC1 {ECO:0000313|EMBL:AFM31239.1};
PubMed=22879609; DOI=10.1128/JVI.01406-12;
Yang X., Chen F., Cao Y., Pang D., Ouyang H., Ren L.;
"Complete Genome Sequence of Porcine Circovirus 2b Strain CC1.";
J. Virol. 86:9536-9536(2012).
[62] {ECO:0000313|EMBL:CBK52356.1, ECO:0000313|Proteomes:UP000139372, ECO:0000313|Proteomes:UP000141912}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Holguin 246 {ECO:0000313|EMBL:CBK52356.1}, and
Matanzas 05 {ECO:0000313|EMBL:CBK52357.1};
PubMed=22119629; DOI=10.1016/j.jviromet.2011.11.009;
Perez L.J., Perera C.L., Frias M.T., Nunez J.I., Ganges L.,
de Arce H.D.;
"A multiple SYBR Green I-based real-time PCR system for the
simultaneous detection of porcine circovirus type 2, porcine
parvovirus, pseudorabies virus and Torque teno sus virus 1 and 2 in
pigs.";
J. Virol. Methods 179:233-241(2012).
[63] {ECO:0000313|EMBL:AEP19261.1, ECO:0000313|Proteomes:UP000152086}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=09HLJ {ECO:0000313|EMBL:AEP19261.1};
PubMed=22300584; DOI=10.1016/j.virusres.2012.01.008;
Cai L., Ni J., Xia Y., Zi Z., Ning K., Qiu P., Li X., Wang B., Liu Q.,
Hu D., Yu X., Zhou Z., Zhai X., Han X., Tian K.;
"Identification of an emerging recombinant cluster in porcine
circovirus type 2.";
Virus Res. 165:95-102(2012).
[64] {ECO:0000313|EMBL:AGG56655.1, ECO:0000313|Proteomes:UP000106275}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=S05-1218 {ECO:0000313|EMBL:AGG56655.1};
Weilenmann R., Zimmermann D., Brugnera E.;
"Recombinant porcine circovirus 2.";
Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
[65] {ECO:0000313|EMBL:CCN25623.1, ECO:0000313|Proteomes:UP000152266}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=PCV2MV {ECO:0000313|EMBL:CCN25623.1};
Reis K.C.P., Henriques M.R., Guimaraes W.V., Santos D.L., Santos L.F.,
Santos J.L.;
"Porcine circovirus type 2 (PCV2) obtained from swine with PWMS.";
Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases.
[66] {ECO:0000313|EMBL:AGO98897.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PCV2_Uy 3 {ECO:0000313|EMBL:AGO98897.1};
PubMed=23806516; DOI=10.1016/j.meegid.2013.06.017;
Ramos N., Mirazo S., Castro G., Arbiza J.;
"Molecular analysis of Porcine Circovirus Type 2 strains from Uruguay:
evidence for natural occurring recombination.";
Infect. Genet. Evol. 19:23-31(2013).
[67] {ECO:0000313|Proteomes:UP000143791, ECO:0000313|Proteomes:UP000150125, ECO:0000313|Proteomes:UP000151490}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=BG0-5 {ECO:0000313|EMBL:AFU51469.1},
Han0-4 {ECO:0000313|EMBL:AFU51459.1},
HB1-1 {ECO:0000313|EMBL:AFU51461.1}, and
HB2 {ECO:0000313|EMBL:AFU51481.1};
PubMed=23414511;
Huynh T.M., Nguyen B.H., Nguyen V.G., Dang H.A., Mai T.N., Tran T.H.,
Ngo M.H., Le V.T., Vu T.N., Ta T.K., Vo V.H., Kim H.K., Park B.K.;
"Phylogenetic and Phylogeographic Analyses of Porcine Circovirus Type
2 Among Pig Farms in Vietnam.";
Transbound. Emerg. Dis. 0:0-0(2013).
[68] {ECO:0000313|Proteomes:UP000109982, ECO:0000313|Proteomes:UP000137318, ECO:0000313|Proteomes:UP000148288}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=01-09 {ECO:0000313|EMBL:AGJ03465.1},
140-03 {ECO:0000313|EMBL:AGJ03444.1},
17-07 {ECO:0000313|EMBL:AGJ03462.1},
48-07 {ECO:0000313|EMBL:AGJ03456.1}, and
49-04 {ECO:0000313|EMBL:AGJ03447.1};
Ruiz V.L.A., Bersano J.G., Ogata R.A., Castro A.M.M.G.;
"Genetic diversity of Porcine circovirus 2 in Brazil.";
Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
[69] {ECO:0000313|Proteomes:UP000167451}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Cruz T.F., Castro A.M.M.G., Araujo Junior J.P.;
"Preliminary study showed that appearance of clinical signs related to
PCV2b infection is age-dependent in CH3/Rockefeller mice inoculated
via intranasal.";
Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
[70] {ECO:0000313|EMBL:AHC94273.1, ECO:0000313|Proteomes:UP000105116}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=GD-nt {ECO:0000313|EMBL:AHC94273.1};
Tang Z., Xiao J., Mo Y., Chen Z., Luo M.;
"Complete genome sequence of two porcine circovirus 2d isolates from
Guangdong pearl river delta region.";
Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
[71] {ECO:0000313|EMBL:AHF95786.1, ECO:0000313|Proteomes:UP000131772}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CQQH08 {ECO:0000313|EMBL:AHF95786.1};
Liang W.W., Zeng Z., Xiong Z.L.;
Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
[72] {ECO:0000313|EMBL:AEN83678.1, ECO:0000313|Proteomes:UP000142043}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=PCV2-Ha09 {ECO:0000313|EMBL:AEN83678.1};
PubMed=24407647;
Halami M.Y., Muller H., Bottcher J., Vahlenkamp T.W.;
"Whole-genome sequences of two strains of porcine circovirus 2
isolated from calves in Germany.";
Genome Announc. 2:e01150-13(2014).
[73] {ECO:0000313|EMBL:AHF27730.1, ECO:0000313|Proteomes:UP000142979}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=LFNI2 {ECO:0000313|EMBL:AHF27730.1};
PubMed=24183921; DOI=10.1016/j.jviromet.2013.10.025;
Cruz T.F., Araujo Junior J.P.;
"Cultivation of PCV2 in swine testicle cells using the shell vial
technique and monitoring of viral replication by qPCR and RT-qPCR.";
J. Virol. Methods 196:82-85(2014).
[74] {ECO:0000313|Proteomes:UP000101472, ECO:0000313|Proteomes:UP000113655, ECO:0000313|Proteomes:UP000132756}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=142b_Cremona_7_05/06/2009 {ECO:0000313|EMBL:AKC45494.1},
144b_Cremona_7_05/06/2009 {ECO:0000313|EMBL:AKC45492.1},
2436/76_Treviso_4_13/10/2010 {ECO:0000313|EMBL:AKC45476.1},
2449/17_Treviso_4_12/10/2010 {ECO:0000313|EMBL:AKC45474.1},
3014/4_Treviso_4_28/12/2010 {ECO:0000313|EMBL:AKC45502.1},
5b_Rovigo_38_10/03/2008 {ECO:0000313|EMBL:AKC45452.1},
6b_Treviso_34_18/03/2008 {ECO:0000313|EMBL:AKC45444.1}, and
84a_Vicenza_36_06/05/2008 {ECO:0000313|EMBL:AKC45442.1};
PubMed=25858118; DOI=10.1016/j.meegid.2015.04.004;
Franzo G., Tucciarone C.M., Dotto G., Gigli A., Ceglie L., Drigo M.;
"International trades, local spread and viral evolution: The case of
porcine circovirus type 2 (PCV2) strains heterogeneity in Italy.";
Infect. Genet. Evol. 32:409-415(2015).
[75] {ECO:0000313|EMBL:AHM92234.1}
NUCLEOTIDE SEQUENCE.
STRAIN=RU {ECO:0000313|EMBL:AHM92234.1};
PubMed=26679798; DOI=.1016/j.rvsc.2015.09.008;
de Castro A.M., Cruz T.F., Yamada K.B., Gerber P.F., Gabardo M.P.,
Araujo J.P.Jr., Guedes R.M., Mori C.K., Oliveira C.P., Santos S.S.,
Richtzenhain L.J.;
"Preliminary evidence of age-dependent clinical signs associated with
porcine circovirus 2b in experimentally infected CH3/Rockefeller
mice.";
Res. Vet. Sci. 103:70-72(2015).
[76] {ECO:0000313|Proteomes:UP000099144, ECO:0000313|Proteomes:UP000104542, ECO:0000313|Proteomes:UP000120418}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=72/12_34 {ECO:0000313|EMBL:ALP48572.1},
72/12_35 {ECO:0000313|EMBL:ALP48574.1},
72/12_36 {ECO:0000313|EMBL:ALP48576.1},
72/12_49 {ECO:0000313|EMBL:ALP48578.1}, and
72/12_52 {ECO:0000313|EMBL:ALP48580.1};
Sato J.P.H., Gava D., Schaefer R., Cantao M.E., Ciacci-Zanella J.R.,
Barcellos D.E.S.N.;
"Genetic characterization of porcine circovirus type 2 in captive wild
boars in southern Brazil.";
Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases.
[77] {ECO:0000313|Proteomes:UP000096734, ECO:0000313|Proteomes:UP000117208, ECO:0000313|Proteomes:UP000122154}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Bd1-2007 {ECO:0000313|EMBL:AJE59594.1},
Bd2-2007 {ECO:0000313|EMBL:AJE59586.1},
Tsh2004 {ECO:0000313|EMBL:AJD80654.1}, and
Tsh2006 {ECO:0000313|EMBL:AJD80655.1};
PubMed=27063558; DOI=10.1016/j.gene.2016.04.014;
Li L., Yuan W., Guo H., Ma Z., Song Q., Wang X., Li H.;
"Prevalence and genetic variation of porcine circovirus type 2 in
Hebei, China from 2004 to 2014.";
Gene 586:222-227(2016).
[78] {ECO:0000313|EMBL:ANH56866.1, ECO:0000313|Proteomes:UP000158188, ECO:0000313|Proteomes:UP000168580}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=YUEY1 {ECO:0000313|EMBL:ANH56866.1}, and
YUEY2 {ECO:0000313|EMBL:ANH56868.1};
Qu T., Yan M., Yang T., Zhao D., Yu X.;
"Porcine circovirus type 2 isolated from pig.";
Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
[79] {ECO:0000313|EMBL:ARB51833.1}
NUCLEOTIDE SEQUENCE.
STRAIN=SD-HJ {ECO:0000313|EMBL:ARB51833.1};
de Groot N.N.;
Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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EMBL; AF055393; AAC35320.1; -; Genomic_DNA.
EMBL; AF055394; AAC35330.1; -; Genomic_DNA.
EMBL; AF201311; AAF35304.1; -; Genomic_DNA.
EMBL; AF201897; AAG41226.1; -; Genomic_DNA.
EMBL; AF538325; AAN06826.1; -; Genomic_DNA.
EMBL; AY177626; AAN81597.1; -; Genomic_DNA.
EMBL; AY181945; AAO24122.1; -; Genomic_DNA.
EMBL; AY188355; AAO39760.1; -; Genomic_DNA.
EMBL; AY217743; AAO61136.1; -; Genomic_DNA.
EMBL; AY321984; AAP83595.1; -; Genomic_DNA.
EMBL; AY321988; AAP83603.1; -; Genomic_DNA.
EMBL; AY321989; AAP83605.1; -; Genomic_DNA.
EMBL; AY321990; AAP83607.1; -; Genomic_DNA.
EMBL; AY321991; AAP83609.1; -; Genomic_DNA.
EMBL; AY321992; AAP83611.1; -; Genomic_DNA.
EMBL; AY321993; AAP83613.1; -; Genomic_DNA.
EMBL; AY321994; AAP83615.1; -; Genomic_DNA.
EMBL; AY321995; AAP83617.1; -; Genomic_DNA.
EMBL; AY321996; AAP83619.1; -; Genomic_DNA.
EMBL; AY321997; AAP83621.1; -; Genomic_DNA.
EMBL; AY321998; AAP83623.1; -; Genomic_DNA.
EMBL; AY321999; AAP83625.1; -; Genomic_DNA.
EMBL; AY322000; AAP83627.1; -; Genomic_DNA.
EMBL; AY322001; AAP83629.1; -; Genomic_DNA.
EMBL; AY322002; AAP83631.1; -; Genomic_DNA.
EMBL; AY256457; AAQ94092.1; -; Genomic_DNA.
EMBL; AY256460; AAQ94098.1; -; Genomic_DNA.
EMBL; AY536755; AAS45843.1; -; Genomic_DNA.
EMBL; AY536756; AAS45844.1; -; Genomic_DNA.
EMBL; AY484408; AAS65977.1; -; Genomic_DNA.
EMBL; AY484409; AAS65979.1; -; Genomic_DNA.
EMBL; AY484411; AAS65983.1; -; Genomic_DNA.
EMBL; AY484412; AAS65985.1; -; Genomic_DNA.
EMBL; AY484413; AAS65987.1; -; Genomic_DNA.
EMBL; AY484415; AAS65991.1; -; Genomic_DNA.
EMBL; AY484416; AAS65993.1; -; Genomic_DNA.
EMBL; AY604430; AAT39479.1; -; Genomic_DNA.
EMBL; AY682990; AAU87505.1; -; Genomic_DNA.
EMBL; AY682993; AAU87511.1; -; Genomic_DNA.
EMBL; AY969004; AAY34249.1; -; Genomic_DNA.
EMBL; DQ233257; ABB20934.1; -; Genomic_DNA.
EMBL; DQ220737; ABB29419.1; -; Genomic_DNA.
EMBL; DQ861895; ABI17523.1; -; Genomic_DNA.
EMBL; DQ861896; ABI17525.1; -; Genomic_DNA.
EMBL; DQ861899; ABI17531.1; -; Genomic_DNA.
EMBL; DQ923523; ABJ98317.1; -; Genomic_DNA.
EMBL; DQ923524; ABJ98319.1; -; Genomic_DNA.
EMBL; EF493838; ABP48083.1; -; Genomic_DNA.
EMBL; EF493840; ABP48087.1; -; Genomic_DNA.
EMBL; EF493841; ABP48089.1; -; Genomic_DNA.
EMBL; EF524516; ABP68617.1; -; Genomic_DNA.
EMBL; EF524517; ABP68619.1; -; Genomic_DNA.
EMBL; EF524528; ABP68641.1; -; Genomic_DNA.
EMBL; EF452350; ABQ10603.1; -; Genomic_DNA.
EMBL; EF452351; ABQ10604.1; -; Genomic_DNA.
EMBL; EF592575; ABQ51918.1; -; Genomic_DNA.
EMBL; EF565355; ABU55974.1; -; Genomic_DNA.
EMBL; EF565357; ABU55978.1; -; Genomic_DNA.
EMBL; EF565360; ABU55984.1; -; Genomic_DNA.
EMBL; EF565364; ABU55992.1; -; Genomic_DNA.
EMBL; EF565366; ABU55996.1; -; Genomic_DNA.
EMBL; EF675234; ABV21957.1; -; Genomic_DNA.
EMBL; EU266595; ABY21529.1; -; Genomic_DNA.
EMBL; EU257511; ABY82488.1; -; Genomic_DNA.
EMBL; EU257516; ABY82498.1; -; Genomic_DNA.
EMBL; EU503032; ACA49858.1; -; Genomic_DNA.
EMBL; EU503034; ACA49862.1; -; Genomic_DNA.
EMBL; EU503037; ACA49868.1; -; Genomic_DNA.
EMBL; EU503038; ACA49870.1; -; Genomic_DNA.
EMBL; EU450584; ACA51547.1; -; Genomic_DNA.
EMBL; EU450585; ACA51549.1; -; Genomic_DNA.
EMBL; EU450586; ACA51551.1; -; Genomic_DNA.
EMBL; EU450589; ACA51557.1; -; Genomic_DNA.
EMBL; EU450590; ACA51559.1; -; Genomic_DNA.
EMBL; EU547456; ACB30103.1; -; Genomic_DNA.
EMBL; EU545543; ACB38238.1; -; Genomic_DNA.
EMBL; EU545546; ACB38244.1; -; Genomic_DNA.
EMBL; EU545547; ACB38246.1; -; Genomic_DNA.
EMBL; EU545548; ACB38248.1; -; Genomic_DNA.
EMBL; EU545549; ACB38250.1; -; Genomic_DNA.
EMBL; EU545550; ACB38252.1; -; Genomic_DNA.
EMBL; EU545551; ACB38254.1; -; Genomic_DNA.
EMBL; EU909688; ACK38054.1; -; Genomic_DNA.
EMBL; FJ644562; ACN24651.1; -; Genomic_DNA.
EMBL; FJ644563; ACN24653.1; -; Genomic_DNA.
EMBL; FJ948167; ACR47968.1; -; Genomic_DNA.
EMBL; FJ905463; ACS37568.1; -; Genomic_DNA.
EMBL; FJ905466; ACS37574.1; -; Genomic_DNA.
EMBL; GQ359000; ACU44720.1; -; Genomic_DNA.
EMBL; GQ404799; ACV32385.1; -; Genomic_DNA.
EMBL; HM009336; ADE60775.1; -; Genomic_DNA.
EMBL; HM009338; ADE60781.1; -; Genomic_DNA.
EMBL; GU938303; ADF28559.1; -; Genomic_DNA.
EMBL; HM003569; ADF87511.1; -; Genomic_DNA.
EMBL; HM038016; ADG07986.1; -; Genomic_DNA.
EMBL; HM038024; ADG08002.1; -; Genomic_DNA.
EMBL; HM038026; ADG08006.1; -; Genomic_DNA.
EMBL; HM038032; ADG08018.1; -; Genomic_DNA.
EMBL; HQ378159; AEA50969.1; -; Genomic_DNA.
EMBL; HQ378160; AEA50971.1; -; Genomic_DNA.
EMBL; HQ378161; AEA50973.1; -; Genomic_DNA.
EMBL; HQ831525; AEC32997.1; -; Genomic_DNA.
EMBL; HQ831529; AEC33009.1; -; Genomic_DNA.
EMBL; HQ831538; AEC33036.1; -; Genomic_DNA.
EMBL; HQ831540; AEC33042.1; -; Genomic_DNA.
EMBL; HQ591365; AEJ87853.1; -; Genomic_DNA.
EMBL; HQ591370; AEJ87863.1; -; Genomic_DNA.
EMBL; HQ591371; AEJ87865.1; -; Genomic_DNA.
EMBL; HQ591372; AEJ87867.1; -; Genomic_DNA.
EMBL; HQ591375; AEJ87873.1; -; Genomic_DNA.
EMBL; HQ591378; AEJ87879.1; -; Genomic_DNA.
EMBL; HQ591379; AEJ87881.1; -; Genomic_DNA.
EMBL; HQ591380; AEJ87883.1; -; Genomic_DNA.
EMBL; JF317585; AEL89151.1; -; Genomic_DNA.
EMBL; HQ202955; AEN03297.1; -; Genomic_DNA.
EMBL; HQ202957; AEN03301.1; -; Genomic_DNA.
EMBL; HQ202959; AEN03305.1; -; Genomic_DNA.
EMBL; HQ202961; AEN03309.1; -; Genomic_DNA.
EMBL; HQ231329; AEN83678.1; -; Genomic_DNA.
EMBL; JF682794; AEP02616.1; -; Genomic_DNA.
EMBL; HQ395034; AEP19261.1; -; Genomic_DNA.
EMBL; HM776444; AER42561.1; -; Genomic_DNA.
EMBL; JQ955679; AFM31239.1; -; Genomic_DNA.
EMBL; JQ181590; AFU51459.1; -; Genomic_DNA.
EMBL; JQ181591; AFU51461.1; -; Genomic_DNA.
EMBL; JQ181595; AFU51469.1; -; Genomic_DNA.
EMBL; JQ181601; AFU51481.1; -; Genomic_DNA.
EMBL; JX512859; AGG56655.1; -; Genomic_DNA.
EMBL; KC835190; AGJ03444.1; -; Genomic_DNA.
EMBL; KC835191; AGJ03447.1; -; Genomic_DNA.
EMBL; KC835194; AGJ03456.1; -; Genomic_DNA.
EMBL; KC835196; AGJ03462.1; -; Genomic_DNA.
EMBL; KC835197; AGJ03465.1; -; Genomic_DNA.
EMBL; KC688420; AGO98897.1; -; Genomic_DNA.
EMBL; KF732649; AHC94273.1; -; Genomic_DNA.
EMBL; KF374705; AHF27730.1; -; Genomic_DNA.
EMBL; KF742546; AHF95786.1; -; Genomic_DNA.
EMBL; KC924956; AHM92234.1; -; Genomic_DNA.
EMBL; KM604666; AJD80654.1; -; Genomic_DNA.
EMBL; KM604667; AJD80655.1; -; Genomic_DNA.
EMBL; KM624030; AJE59586.1; -; Genomic_DNA.
EMBL; KM624034; AJE59594.1; -; Genomic_DNA.
EMBL; KP231129; AKC45442.1; -; Genomic_DNA.
EMBL; KP231130; AKC45444.1; -; Genomic_DNA.
EMBL; KP231134; AKC45452.1; -; Genomic_DNA.
EMBL; KP231145; AKC45474.1; -; Genomic_DNA.
EMBL; KP231146; AKC45476.1; -; Genomic_DNA.
EMBL; KP231154; AKC45492.1; -; Genomic_DNA.
EMBL; KP231155; AKC45494.1; -; Genomic_DNA.
EMBL; KP231159; AKC45502.1; -; Genomic_DNA.
EMBL; KT216672; ALP48572.1; -; Genomic_DNA.
EMBL; KT216673; ALP48574.1; -; Genomic_DNA.
EMBL; KT216674; ALP48576.1; -; Genomic_DNA.
EMBL; KT216675; ALP48578.1; -; Genomic_DNA.
EMBL; KT216676; ALP48580.1; -; Genomic_DNA.
EMBL; KX161691; ANH56866.1; -; Genomic_DNA.
EMBL; KX161692; ANH56868.1; -; Genomic_DNA.
EMBL; KX981602; ARB51833.1; -; Genomic_DNA.
EMBL; FN687856; CBK52356.1; -; Genomic_DNA.
EMBL; FN687857; CBK52357.1; -; Genomic_DNA.
EMBL; HF542107; CCN25623.1; -; Genomic_DNA.
Proteomes; UP000096734; Genome.
Proteomes; UP000099144; Genome.
Proteomes; UP000100993; Genome.
Proteomes; UP000101167; Genome.
Proteomes; UP000101472; Genome.
Proteomes; UP000101539; Genome.
Proteomes; UP000102042; Genome.
Proteomes; UP000102800; Genome.
Proteomes; UP000104341; Genome.
Proteomes; UP000104396; Genome.
Proteomes; UP000104542; Genome.
Proteomes; UP000104711; Genome.
Proteomes; UP000104965; Genome.
Proteomes; UP000105116; Genome.
Proteomes; UP000106144; Genome.
Proteomes; UP000106275; Genome.
Proteomes; UP000106332; Genome.
Proteomes; UP000106591; Genome.
Proteomes; UP000106745; Genome.
Proteomes; UP000108111; Genome.
Proteomes; UP000108312; Genome.
Proteomes; UP000109231; Genome.
Proteomes; UP000109631; Genome.
Proteomes; UP000109848; Genome.
Proteomes; UP000109982; Genome.
Proteomes; UP000110893; Genome.
Proteomes; UP000112290; Genome.
Proteomes; UP000112494; Genome.
Proteomes; UP000112519; Genome.
Proteomes; UP000112970; Genome.
Proteomes; UP000113655; Genome.
Proteomes; UP000113940; Genome.
Proteomes; UP000114460; Genome.
Proteomes; UP000114788; Genome.
Proteomes; UP000116475; Genome.
Proteomes; UP000116570; Genome.
Proteomes; UP000117208; Genome.
Proteomes; UP000117409; Genome.
Proteomes; UP000117543; Genome.
Proteomes; UP000119310; Genome.
Proteomes; UP000119555; Genome.
Proteomes; UP000119698; Genome.
Proteomes; UP000120375; Genome.
Proteomes; UP000120418; Genome.
Proteomes; UP000120658; Genome.
Proteomes; UP000120839; Genome.
Proteomes; UP000121006; Genome.
Proteomes; UP000121324; Genome.
Proteomes; UP000121590; Genome.
Proteomes; UP000122154; Genome.
Proteomes; UP000122169; Genome.
Proteomes; UP000122586; Genome.
Proteomes; UP000122694; Genome.
Proteomes; UP000123450; Genome.
Proteomes; UP000123988; Genome.
Proteomes; UP000124251; Genome.
Proteomes; UP000124612; Genome.
Proteomes; UP000124880; Genome.
Proteomes; UP000125189; Genome.
Proteomes; UP000125776; Genome.
Proteomes; UP000126034; Genome.
Proteomes; UP000128090; Genome.
Proteomes; UP000129242; Genome.
Proteomes; UP000129949; Genome.
Proteomes; UP000130435; Genome.
Proteomes; UP000131772; Genome.
Proteomes; UP000132242; Genome.
Proteomes; UP000132756; Genome.
Proteomes; UP000133719; Genome.
Proteomes; UP000134044; Genome.
Proteomes; UP000134138; Genome.
Proteomes; UP000135070; Genome.
Proteomes; UP000136032; Genome.
Proteomes; UP000137264; Genome.
Proteomes; UP000137318; Genome.
Proteomes; UP000137657; Genome.
Proteomes; UP000137852; Genome.
Proteomes; UP000139372; Genome.
Proteomes; UP000140306; Genome.
Proteomes; UP000140316; Genome.
Proteomes; UP000141367; Genome.
Proteomes; UP000141912; Genome.
Proteomes; UP000142043; Genome.
Proteomes; UP000142148; Genome.
Proteomes; UP000142242; Genome.
Proteomes; UP000142836; Genome.
Proteomes; UP000142979; Genome.
Proteomes; UP000143336; Genome.
Proteomes; UP000143350; Genome.
Proteomes; UP000143421; Genome.
Proteomes; UP000143791; Genome.
Proteomes; UP000144204; Genome.
Proteomes; UP000144620; Genome.
Proteomes; UP000145187; Genome.
Proteomes; UP000145381; Genome.
Proteomes; UP000145688; Genome.
Proteomes; UP000146672; Genome.
Proteomes; UP000148288; Genome.
Proteomes; UP000148313; Genome.
Proteomes; UP000148430; Genome.
Proteomes; UP000150125; Genome.
Proteomes; UP000150229; Genome.
Proteomes; UP000150524; Genome.
Proteomes; UP000150834; Genome.
Proteomes; UP000151490; Genome.
Proteomes; UP000152086; Genome.
Proteomes; UP000152266; Genome.
Proteomes; UP000152491; Genome.
Proteomes; UP000152816; Genome.
Proteomes; UP000153459; Genome.
Proteomes; UP000154620; Genome.
Proteomes; UP000157668; Genome.
Proteomes; UP000158188; Genome.
Proteomes; UP000158457; Genome.
Proteomes; UP000159049; Genome.
Proteomes; UP000160268; Genome.
Proteomes; UP000161092; Genome.
Proteomes; UP000162189; Genome.
Proteomes; UP000162360; Genome.
Proteomes; UP000163826; Genome.
Proteomes; UP000164000; Genome.
Proteomes; UP000164690; Genome.
Proteomes; UP000164805; Genome.
Proteomes; UP000166090; Genome.
Proteomes; UP000166506; Genome.
Proteomes; UP000166801; Genome.
Proteomes; UP000166820; Genome.
Proteomes; UP000167451; Genome.
Proteomes; UP000167997; Genome.
Proteomes; UP000168155; Genome.
Proteomes; UP000168378; Genome.
Proteomes; UP000168580; Genome.
Proteomes; UP000168583; Genome.
Proteomes; UP000168967; Genome.
Proteomes; UP000170057; Genome.
Proteomes; UP000170226; Genome.
Proteomes; UP000171169; Genome.
Proteomes; UP000172023; Genome.
Proteomes; UP000172194; Genome.
Proteomes; UP000172774; Genome.
Proteomes; UP000173087; Genome.
Proteomes; UP000173335; Genome.
Proteomes; UP000174829; Genome.
Proteomes; UP000174924; Genome.
GO; GO:0042624; F:ATPase activity, uncoupled; IEA:InterPro.
GO; GO:0016888; F:endodeoxyribonuclease activity, producing 5'-phosphomonoesters; IEA:InterPro.
GO; GO:0016779; F:nucleotidyltransferase activity; IEA:InterPro.
GO; GO:0003723; F:RNA binding; IEA:InterPro.
GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
GO; GO:0006260; P:DNA replication; IEA:InterPro.
GO; GO:0018142; P:protein-DNA covalent cross-linking; IEA:InterPro.
InterPro; IPR000605; Helicase_SF3_ssDNA/RNA_vir.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR003365; Viral_rep_N.
Pfam; PF00910; RNA_helicase; 1.
Pfam; PF02407; Viral_Rep; 1.
SUPFAM; SSF52540; SSF52540; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000096734,
ECO:0000313|Proteomes:UP000099144, ECO:0000313|Proteomes:UP000100993,
ECO:0000313|Proteomes:UP000101167}.
DOMAIN 16 100 Viral_Rep. {ECO:0000259|Pfam:PF02407}.
DOMAIN 171 257 RNA_helicase. {ECO:0000259|Pfam:PF00910}.
SEQUENCE 314 AA; 35783 MW; E55A4EAC416273A0 CRC64;
MPSKKNGRSG PQPHKRWVFT LNNPSEDERK KIRDLPISLF DYFIVGEEGN EEGRTPHLQG
FANFVKKQTF NKVKWYLGAR CHIEKAKGTD QQNKEYCSKE GNLLMECGAP RSQGQRSDLS
TAVSTLLESG SLVTVAEQHP VTFVRNFRGL AELLKVSGKM QKRDWKTNVH VIVGPPGCGK
SKWAANFADP ETTYWKPPRN KWWDGYHGEE VVVIDDFYGW LPWDDLLRLC DRYPLTVETK
GGTVPFLARS ILITSNQTPL EWYSSTAVPA VEALYRRITS LVFWKNATEQ STEEGGQFVT
LSPPCPEFPY EINY


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