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ATP-dependent RNA helicase FAL1 (EC 3.6.4.13)

 FAL1_PHANO              Reviewed;         374 AA.
Q0UAT0;
03-APR-2007, integrated into UniProtKB/Swiss-Prot.
08-APR-2008, sequence version 3.
25-OCT-2017, entry version 67.
RecName: Full=ATP-dependent RNA helicase FAL1;
EC=3.6.4.13;
Name=FAL1; ORFNames=SNOG_11134;
Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
(Glume blotch fungus) (Parastagonospora nodorum).
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae;
Phaeosphaeriaceae; Parastagonospora.
NCBI_TaxID=321614;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SN15 / ATCC MYA-4574 / FGSC 10173;
PubMed=18024570; DOI=10.1105/tpc.107.052829;
Hane J.K., Lowe R.G.T., Solomon P.S., Tan K.-C., Schoch C.L.,
Spatafora J.W., Crous P.W., Kodira C.D., Birren B.W., Galagan J.E.,
Torriani S.F.F., McDonald B.A., Oliver R.P.;
"Dothideomycete-plant interactions illuminated by genome sequencing
and EST analysis of the wheat pathogen Stagonospora nodorum.";
Plant Cell 19:3347-3368(2007).
-!- FUNCTION: ATP-dependent RNA helicase involved in 40S ribosomal
subunit biogenesis. Required for the processing and cleavage of
35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA
(By similarity). {ECO:0000250}.
-!- CATALYTIC ACTIVITY: ATP + H(2)O = ADP + phosphate.
-!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
-!- DOMAIN: The Q motif is unique to and characteristic of the DEAD
box family of RNA helicases and controls ATP binding and
hydrolysis.
-!- SIMILARITY: Belongs to the DEAD box helicase family. DDX48/FAL1
subfamily. {ECO:0000305}.
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EMBL; CH445342; EAT81633.2; -; Genomic_DNA.
RefSeq; XP_001801383.1; XM_001801331.1.
ProteinModelPortal; Q0UAT0; -.
SMR; Q0UAT0; -.
STRING; 13684.SNOT_11134; -.
PRIDE; Q0UAT0; -.
EnsemblFungi; SNOT_11134; SNOT_11134; SNOG_11134.
GeneID; 5978291; -.
KEGG; pno:SNOG_11134; -.
InParanoid; Q0UAT0; -.
KO; K13025; -.
OrthoDB; EOG092C2B1L; -.
Proteomes; UP000001055; Unassembled WGS sequence.
GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
GO; GO:0005730; C:nucleolus; IBA:GO_Central.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO; GO:0004004; F:ATP-dependent RNA helicase activity; IBA:GO_Central.
GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
GO; GO:0010501; P:RNA secondary structure unwinding; IBA:GO_Central.
GO; GO:0008380; P:RNA splicing; IBA:GO_Central.
GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
CDD; cd00079; HELICc; 1.
InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
InterPro; IPR014001; Helicase_ATP-bd.
InterPro; IPR001650; Helicase_C.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
Pfam; PF00270; DEAD; 2.
Pfam; PF00271; Helicase_C; 1.
SMART; SM00487; DEXDc; 1.
SMART; SM00490; HELICc; 1.
SUPFAM; SSF52540; SSF52540; 1.
PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PROSITE; PS51194; HELICASE_CTER; 1.
PROSITE; PS51195; Q_MOTIF; 1.
3: Inferred from homology;
ATP-binding; Complete proteome; Helicase; Hydrolase;
Nucleotide-binding; Nucleus; Reference proteome; Ribosome biogenesis;
RNA-binding; rRNA processing.
CHAIN 1 374 ATP-dependent RNA helicase FAL1.
/FTId=PRO_0000282448.
DOMAIN 56 201 Helicase ATP-binding.
{ECO:0000255|PROSITE-ProRule:PRU00541}.
DOMAIN 212 373 Helicase C-terminal.
{ECO:0000255|PROSITE-ProRule:PRU00542}.
NP_BIND 69 76 ATP. {ECO:0000255|PROSITE-
ProRule:PRU00541}.
MOTIF 25 53 Q motif.
MOTIF 149 152 DEAD box.
SEQUENCE 374 AA; 42661 MW; 86F395FDBA629027 CRC64;
MADGIDRNAD EKMEFSTSKE VTVAPTFEAM HLKENLLRGI YAYGYESPSA VQSRAIVQVC
KGRDTIAQAQ SGTGKTATFS ISILQSVIMG LGDYMNVQCH ACIGGTNVGE DIRKLDYGQH
VVSGTPGRVA DMIRRRNLRT RNIKMLVLDE ADELLNRGFR EQIYDVYRYL PPATQVVVVS
ATLPYDVLEM TTKFMTDPVR ILVKRDELTL EGLKQYFIAI EKEEWKFDTL CDLYDTLTIT
QAVIFCNTRR KVDWLTDKMR EANFTVSSMH GDMPQRERDS IMQDFRQANS RVLISTDVWA
RGIDVQQVSL VINYDLPSNR ENYIHRIGRS GRFGRKGVAI NFVTQEDVRI LRDIELYYST
QIDEMPMNVA DLLA


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