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Alcohol dehydrogenase 7 (Class IV), mu or sigma polypeptide (Alcohol dehydrogenase class 4)

 Q9D748_MOUSE            Unreviewed;       374 AA.
Q9D748;
01-JUN-2001, integrated into UniProtKB/TrEMBL.
01-JUN-2001, sequence version 1.
22-NOV-2017, entry version 150.
SubName: Full=Alcohol dehydrogenase 7 (Class IV), mu or sigma polypeptide {ECO:0000313|EMBL:AAH47267.1};
SubName: Full=Alcohol dehydrogenase class 4 {ECO:0000313|EMBL:AAM22808.1};
Name=Adh7 {ECO:0000313|EMBL:AAH47267.1, ECO:0000313|MGI:MGI:87926};
Synonyms=Adh4 {ECO:0000313|EMBL:AAM22808.1};
ORFNames=mCG_4121 {ECO:0000313|EMBL:EDL12104.1};
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090 {ECO:0000313|EMBL:BAB26385.1};
[1] {ECO:0000313|EMBL:BAB26385.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAB26385.1};
TISSUE=Tongue {ECO:0000313|EMBL:BAB26385.1};
PubMed=10349636; DOI=10.1016/S0076-6879(99)03004-9;
Carninci P., Hayashizaki Y.;
"High-efficiency full-length cDNA cloning.";
Methods Enzymol. 303:19-44(1999).
[2] {ECO:0000313|EMBL:BAB26385.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAB26385.1};
TISSUE=Tongue {ECO:0000313|EMBL:BAB26385.1};
PubMed=11042159; DOI=10.1101/gr.145100;
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M.,
Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.;
"Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new genes.";
Genome Res. 10:1617-1630(2000).
[3] {ECO:0000313|EMBL:BAB26385.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAB26385.1};
TISSUE=Tongue {ECO:0000313|EMBL:BAB26385.1};
PubMed=11076861; DOI=10.1101/gr.152600;
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P.,
Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M.,
Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A.,
Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K.,
Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M.,
Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J.,
Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.;
"RIKEN integrated sequence analysis (RISA) system--384-format
sequencing pipeline with 384 multicapillary sequencer.";
Genome Res. 10:1757-1771(2000).
[4] {ECO:0000313|EMBL:BAB26385.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAB26385.1};
TISSUE=Tongue {ECO:0000313|EMBL:BAB26385.1};
Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H.,
Arakawa T., Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M.,
Hanagaki T., Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F.,
Imotani K., Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H.,
Kawai J., Kojima Y., Konno H., Kouda M., Koya S., Kurihara C.,
Matsuyama T., Miyazaki A., Nishi K., Nomura K., Numazaki R., Ohno M.,
Okazaki Y., Okido T., Owa C., Saito H., Saito R., Sakai C., Sakai K.,
Sano H., Sasaki D., Shibata K., Shibata Y., Shinagawa A., Shiraki T.,
Sogabe Y., Suzuki H., Tagami M., Tagawa A., Takahashi F., Tanaka T.,
Tejima Y., Toya T., Yamamura T., Yasunishi A., Yoshida K., Yoshino M.,
Muramatsu M., Hayashizaki Y.;
Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases.
[5] {ECO:0000313|EMBL:AAM22808.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:AAM22808.1};
Dolney D.E.II., Szalai G., Duester G., Felder M.R.;
"Molecular Analysis of Genetic Differences Among Inbred Mouse Strains
Controlling the Tissue Specific Expression Pattern of Alcohol
Dehydrogenase 4.";
Submitted (DEC-2000) to the EMBL/GenBank/DDBJ databases.
[6] {ECO:0000313|EMBL:BAB26385.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAB26385.1};
TISSUE=Tongue {ECO:0000313|EMBL:BAB26385.1};
PubMed=11217851; DOI=10.1038/35055500;
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium;
"Functional annotation of a full-length mouse cDNA collection.";
Nature 409:685-690(2001).
[7] {ECO:0000313|EMBL:BAB26385.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAB26385.1};
TISSUE=Tongue {ECO:0000313|EMBL:BAB26385.1};
PubMed=12466851; DOI=10.1038/nature01266;
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team;
"Analysis of the mouse transcriptome based on functional annotation of
60,770 full-length cDNAs.";
Nature 420:563-573(2002).
[8] {ECO:0000313|EMBL:EDL12104.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Mixed {ECO:0000313|EMBL:EDL12104.1};
PubMed=12040188; DOI=10.1126/science.1069193;
Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R.,
Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A.,
Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.,
Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K.,
Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J.,
Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R.,
Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H.,
Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A.,
Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A.,
Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C.,
Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C.,
Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B.,
Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E.,
Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R.,
Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C.,
Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L.,
Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S.,
Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L.,
Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R.,
Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R.,
Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J.,
Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L.,
Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C.,
Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A.,
Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H.,
Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L.,
Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M.,
Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K.,
Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S.,
Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J.,
Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G.,
Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.;
"A comparison of whole-genome shotgun-derived mouse chromosome 16 and
the human genome.";
Science 296:1661-1671(2002).
[9] {ECO:0000313|EMBL:AAH47267.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Olfactory epithelium {ECO:0000313|EMBL:AAH47267.1};
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H.,
Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M.,
Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S.,
Feolo M., Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F.,
Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J.,
Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N.,
Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B.,
Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B.,
Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S.,
Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R.,
Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L.,
Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E.,
Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J.,
Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D.,
Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G.,
Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J.,
Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L.,
Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D.,
Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A.,
Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S.,
Makowski K.A., Bosak S., Malek J.;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[10] {ECO:0000313|EMBL:BAB26385.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAB26385.1};
TISSUE=Tongue {ECO:0000313|EMBL:BAB26385.1};
The FANTOM Consortium;
Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group);
"The Transcriptional Landscape of the Mammalian Genome.";
Science 309:1559-1563(2005).
[11] {ECO:0000313|EMBL:BAB26385.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAB26385.1};
TISSUE=Tongue {ECO:0000313|EMBL:BAB26385.1};
PubMed=16141073; DOI=10.1126/science.1112009;
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium;
"Antisense Transcription in the Mammalian Transcriptome.";
Science 309:1564-1566(2005).
[12] {ECO:0000313|EMBL:EDL12104.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Mixed {ECO:0000313|EMBL:EDL12104.1};
Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
-!- COFACTOR:
Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
Evidence={ECO:0000256|RuleBase:RU361277};
-!- SIMILARITY: Belongs to the zinc-containing alcohol dehydrogenase
family. {ECO:0000256|RuleBase:RU361277}.
-----------------------------------------------------------------------
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EMBL; BC047267; AAH47267.1; -; mRNA.
EMBL; AF331802; AAM22808.1; -; mRNA.
EMBL; AK009600; BAB26385.1; -; mRNA.
EMBL; AK009588; BAE43215.1; -; mRNA.
EMBL; CH466532; EDL12104.1; -; Genomic_DNA.
RefSeq; NP_033756.2; NM_009626.4.
RefSeq; XP_006500982.1; XM_006500919.3.
UniGene; Mm.8473; -.
MINT; MINT-4127358; -.
GeneID; 11529; -.
KEGG; mmu:11529; -.
CTD; 131; -.
MGI; MGI:87926; Adh7.
eggNOG; KOG0022; Eukaryota.
eggNOG; COG1062; LUCA.
HOVERGEN; HBG000195; -.
KO; K13951; -.
OMA; HEVIMEM; -.
OrthoDB; EOG091G08N3; -.
Bgee; ENSMUSG00000055301; -.
GO; GO:0005829; C:cytosol; IEA:Ensembl.
GO; GO:0005576; C:extracellular region; IEA:GOC.
GO; GO:0005886; C:plasma membrane; IEA:Ensembl.
GO; GO:0004024; F:alcohol dehydrogenase activity, zinc-dependent; IEA:Ensembl.
GO; GO:0004031; F:aldehyde oxidase activity; IEA:Ensembl.
GO; GO:0035276; F:ethanol binding; IEA:Ensembl.
GO; GO:0048019; F:receptor antagonist activity; IEA:Ensembl.
GO; GO:0019841; F:retinol binding; IEA:Ensembl.
GO; GO:0004745; F:retinol dehydrogenase activity; IEA:Ensembl.
GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
GO; GO:0006068; P:ethanol catabolic process; IEA:Ensembl.
GO; GO:0006069; P:ethanol oxidation; IEA:Ensembl.
GO; GO:0010430; P:fatty acid omega-oxidation; IEA:Ensembl.
GO; GO:0009617; P:response to bacterium; IEA:Ensembl.
GO; GO:0045471; P:response to ethanol; IEA:Ensembl.
GO; GO:0042573; P:retinoic acid metabolic process; IEA:Ensembl.
GO; GO:0042572; P:retinol metabolic process; IEA:Ensembl.
InterPro; IPR013149; ADH_C.
InterPro; IPR013154; ADH_N.
InterPro; IPR002328; ADH_Zn_CS.
InterPro; IPR011032; GroES-like_sf.
InterPro; IPR036291; NAD(P)-bd_dom_sf.
InterPro; IPR020843; PKS_ER.
InterPro; IPR028635; Zinc_ADH_IV.
PANTHER; PTHR43880:SF2; PTHR43880:SF2; 1.
Pfam; PF08240; ADH_N; 1.
Pfam; PF00107; ADH_zinc_N; 1.
SMART; SM00829; PKS_ER; 1.
SUPFAM; SSF50129; SSF50129; 2.
SUPFAM; SSF51735; SSF51735; 1.
PROSITE; PS00059; ADH_ZINC; 1.
2: Evidence at transcript level;
Metal-binding {ECO:0000256|RuleBase:RU361277};
Zinc {ECO:0000256|RuleBase:RU361277}.
DOMAIN 17 372 PKS_ER. {ECO:0000259|SMART:SM00829}.
SEQUENCE 374 AA; 39904 MW; D615119A23B41843 CRC64;
MGTAGKVIKC KAAVLWGVNQ PFSIEEIEVA PPKAKEVRVK ILATGICRTD DHIIKGSMVS
KFPVIVGHEA VGVVESVGEG VTTVRPGDKV IPLFLPQCRE CNACLNPEGN LCIRSDLTGR
GVLADGTTRF TCKGKPVQHF MNTSTFTEYT VLDESSVAKV DGAAPPEKAC LIGCGFSTGY
GAAVKTAKVT PGSTCVVFGL GGVGLSVIMG CKAAGASRII GIDINKDKFQ KALAVGATEC
ISPKDSTKPI SEVLSDMTGN TIQYTFEVIG RLETMVDALS SCHMNYGTSV VVGAPPSAKM
LTYDPMLLFT GRTWKGCVFG GWKSRDDVPK LVTEFLEKKF DLDQLITHTL PFNNINEGFE
LLYSGKSIRT VLTF


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