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Ammonium transporter 1 member 4 (AtAMT1;4)

 AMT14_ARATH             Reviewed;         504 AA.
Q9SVT8; Q4PSH7;
26-JUL-2002, integrated into UniProtKB/Swiss-Prot.
01-MAY-2000, sequence version 1.
07-NOV-2018, entry version 123.
RecName: Full=Ammonium transporter 1 member 4;
Short=AtAMT1;4;
Name=AMT1-4; OrderedLocusNames=At4g28700; ORFNames=F16A16.190;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=10617198; DOI=10.1038/47134;
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G.,
Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N.,
Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M.,
Weichselgartner M., de Simone V., Obermaier B., Mache R., Mueller M.,
Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T.,
Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I.,
Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P.,
Langham S.-A., McCullagh B., Bilham L., Robben J.,
van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F.,
Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E.,
Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W.,
Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P.,
Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H.,
De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R.,
van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S.,
Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R.,
Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S.,
Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H.,
Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S.,
Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A.,
Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R.,
Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S.,
Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E.,
Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A.,
Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T.,
Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C.,
Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S.,
Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K.,
Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L.,
Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J.,
Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J.,
Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D.,
Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D.,
Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C.,
Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C.,
Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R.,
Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S.,
Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A.,
Chen E., Marra M.A., Martienssen R., McCombie W.R.;
"Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana.";
Nature 402:769-777(1999).
[2]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
PubMed=27862469; DOI=10.1111/tpj.13415;
Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
Town C.D.;
"Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome.";
Plant J. 89:789-804(2017).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
Redman J.C., Wu H.C., Utterback T., Town C.D.;
Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
[4]
FUNCTION, BIOPHYSICOCHEMICAL PROPERTIES, SUBCELLULAR LOCATION, AND
TISSUE SPECIFICITY.
PubMed=19073648; DOI=10.1093/pcp/pcn186;
Yuan L., Graff L., Loque D., Kojima S., Tsuchiya Y.N., Takahashi H.,
von Wiren N.;
"AtAMT1;4, a pollen-specific high-affinity ammonium transporter of the
plasma membrane in Arabidopsis.";
Plant Cell Physiol. 50:13-25(2009).
-!- FUNCTION: High affinity ammonium transporter in the plasma
membrane. {ECO:0000269|PubMed:19073648}.
-!- BIOPHYSICOCHEMICAL PROPERTIES:
Kinetic parameters:
KM=17 uM for ammonium chloride {ECO:0000269|PubMed:19073648};
-!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:19073648};
Multi-pass membrane protein {ECO:0000269|PubMed:19073648}.
-!- TISSUE SPECIFICITY: Specifically expressed in pollen grains and
tubes. {ECO:0000269|PubMed:19073648}.
-!- SIMILARITY: Belongs to the ammonia transporter channel (TC
1.A.11.2) family. {ECO:0000305}.
-----------------------------------------------------------------------
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EMBL; AL035353; CAA22982.1; -; Genomic_DNA.
EMBL; AL161573; CAB81458.1; -; Genomic_DNA.
EMBL; CP002687; AEE85527.1; -; Genomic_DNA.
EMBL; DQ056659; AAY78806.1; -; mRNA.
PIR; T04529; T04529.
RefSeq; NP_194599.1; NM_119012.2.
UniGene; At.54537; -.
ProteinModelPortal; Q9SVT8; -.
BioGrid; 14275; 8.
IntAct; Q9SVT8; 7.
STRING; 3702.AT4G28700.1; -.
TCDB; 1.A.11.2.6; the ammonium transporter channel (amt) family.
PaxDb; Q9SVT8; -.
PRIDE; Q9SVT8; -.
EnsemblPlants; AT4G28700.1; AT4G28700.1; AT4G28700.
GeneID; 828988; -.
Gramene; AT4G28700.1; AT4G28700.1; AT4G28700.
KEGG; ath:AT4G28700; -.
Araport; AT4G28700; -.
TAIR; locus:2117758; AT4G28700.
eggNOG; KOG0682; Eukaryota.
eggNOG; COG0004; LUCA.
HOGENOM; HOG000017735; -.
InParanoid; Q9SVT8; -.
KO; K03320; -.
OMA; FVLHKME; -.
OrthoDB; EOG093609QB; -.
PhylomeDB; Q9SVT8; -.
SABIO-RK; Q9SVT8; -.
PRO; PR:Q9SVT8; -.
Proteomes; UP000006548; Chromosome 4.
ExpressionAtlas; Q9SVT8; baseline and differential.
Genevisible; Q9SVT8; AT.
GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
GO; GO:0005886; C:plasma membrane; IDA:TAIR.
GO; GO:0009506; C:plasmodesma; IDA:TAIR.
GO; GO:0008519; F:ammonium transmembrane transporter activity; IDA:TAIR.
GO; GO:0015398; F:high-affinity secondary active ammonium transmembrane transporter activity; IMP:TAIR.
GO; GO:0072488; P:ammonium transmembrane transport; IDA:TAIR.
Gene3D; 1.10.3430.10; -; 1.
InterPro; IPR029020; Ammonium/urea_transptr.
InterPro; IPR001905; Ammonium_transpt.
InterPro; IPR018047; Ammonium_transpt_CS.
InterPro; IPR024041; NH4_transpt_AmtB-like_dom.
Pfam; PF00909; Ammonium_transp; 1.
TIGRFAMs; TIGR00836; amt; 1.
PROSITE; PS01219; AMMONIUM_TRANSP; 1.
1: Evidence at protein level;
Ammonia transport; Cell membrane; Complete proteome; Membrane;
Phosphoprotein; Reference proteome; Transmembrane;
Transmembrane helix; Transport.
CHAIN 1 504 Ammonium transporter 1 member 4.
/FTId=PRO_0000139746.
TRANSMEM 12 32 Helical. {ECO:0000255}.
TRANSMEM 55 75 Helical. {ECO:0000255}.
TRANSMEM 90 110 Helical. {ECO:0000255}.
TRANSMEM 136 156 Helical. {ECO:0000255}.
TRANSMEM 161 181 Helical. {ECO:0000255}.
TRANSMEM 207 227 Helical. {ECO:0000255}.
TRANSMEM 251 271 Helical. {ECO:0000255}.
TRANSMEM 292 314 Helical. {ECO:0000255}.
TRANSMEM 318 338 Helical. {ECO:0000255}.
TRANSMEM 344 364 Helical. {ECO:0000255}.
TRANSMEM 377 397 Helical. {ECO:0000255}.
TRANSMEM 430 450 Helical. {ECO:0000255}.
COMPBIAS 20 29 Poly-Ala.
MOD_RES 471 471 Phosphothreonine.
{ECO:0000250|UniProtKB:P54144}.
SEQUENCE 504 AA; 53658 MW; 089B12A9EE06FCDA CRC64;
MASALSCSAS DLIPLLSGGA NATAAAAAAE YICGRFDTVA GKFTDAAYAI DNTYLLFSAY
LVFAMQLGFA MLCAGSVRAK NTMNIMLTNV IDAAAGGLFY YLFGFAFAFG SPSNGFIGKH
FFGMYDFPQP TFDYPYFLYQ WTFAIAAAGI TSGSIAERTQ FVAYLIYSSF LTGLVYPIVS
HWFWSSDGWA SPARSENLLF QSGVIDFAGS GVVHMVGGIA GLWGALIEGP RIGRFGVGGK
PVTLRGHSAT LVVLGTFLLW FGWYGFNPGS FATIFKAYGE TPGSSFYGQW SAVGRTAVTT
TLAGCTAALT TLFGKRLIDG YWNVTDVCNG LLGGFAAITS GCSVVEPWAA LVCGFVAAWV
LMGCNRLAEK LQFDDPLEAA QLHGGCGAWG IIFTGLFAEK RYIAEIFGGD PNRPFGLLMG
GGGRLLAAHV VQILVITGWV SVTMGTLFFI LHKLKLLRIP AEDEIAGVDP TSHGGLAYMY
TEDEIRNGIM VRRVGGDNDP NVGV


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