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Ammonium transporter 2

 AMT2_DICDI              Reviewed;         431 AA.
Q9BLG3; Q54YS9;
03-MAR-2009, integrated into UniProtKB/Swiss-Prot.
01-JUN-2001, sequence version 1.
28-MAR-2018, entry version 98.
RecName: Full=Ammonium transporter 2;
Name=amtB; ORFNames=DDB_G0277889;
Dictyostelium discoideum (Slime mold).
Eukaryota; Amoebozoa; Mycetozoa; Dictyostelids; Dictyosteliales;
Dictyosteliaceae; Dictyostelium.
NCBI_TaxID=44689;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=AX2;
Chen Y., Huang C.-H.;
"Cloning and characterization of three ammonium transporter genes in
AX2 strain of Dictyostelium discoideum.";
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=AX4;
PubMed=17951519; DOI=10.1128/EC.00204-07;
Yoshino R., Morio T., Yamada Y., Kuwayama H., Sameshima M., Tanaka Y.,
Sesaki H., Iijima M.;
"Regulation of ammonia homeostasis by the ammonium transporter AmtA in
Dictyostelium discoideum.";
Eukaryot. Cell 6:2419-2428(2007).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=AX4;
PubMed=15875012; DOI=10.1038/nature03481;
Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A.,
Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q.,
Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F.,
Bankier A.T., Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P.,
Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P.,
Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N.,
Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M.,
Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I.,
Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R.,
Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
Knights A., Loulseged H., Mungall K.L., Oliver K., Price C.,
Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D.,
Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S.,
Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T.,
Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A.,
Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M.,
Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G.,
Kuspa A.;
"The genome of the social amoeba Dictyostelium discoideum.";
Nature 435:43-57(2005).
[4]
FUNCTION, AND DEVELOPMENTAL STAGE.
PubMed=14686953; DOI=10.1111/j.1432-0436.2003.07109002.x;
Follstaedt S.C., Kirsten J.H., Singleton C.K.;
"Temporal and spatial expression of ammonium transporter genes during
growth and development of Dictyostelium discoideum.";
Differentiation 71:557-566(2003).
[5]
SUBCELLULAR LOCATION, AND TOPOLOGY.
PubMed=19108721; DOI=10.1186/1471-2121-9-71;
Kirsten J.H., Xiong Y., Davis C.T., Singleton C.K.;
"Subcellular localization of ammonium transporters in Dictyostelium
discoideum.";
BMC Cell Biol. 9:71-71(2008).
-!- FUNCTION: Ammonium transporter that mediates the excretion of
ammonium from the prestalk cells from the slug. Controls ammonium
homeostasis during growth and development. Ammonium has been shown
to function as a morphogen at multiple steps during the
development. {ECO:0000269|PubMed:14686953}.
-!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:19108721};
Multi-pass membrane protein {ECO:0000269|PubMed:19108721}.
Endosome membrane {ECO:0000269|PubMed:19108721}; Multi-pass
membrane protein {ECO:0000269|PubMed:19108721}. Lysosome membrane
{ECO:0000269|PubMed:19108721}; Multi-pass membrane protein
{ECO:0000269|PubMed:19108721}. Contractile vacuole membrane
{ECO:0000269|PubMed:19108721}; Multi-pass membrane protein
{ECO:0000269|PubMed:19108721}. Cytoplasmic vesicle, phagosome
membrane {ECO:0000269|PubMed:19108721}; Multi-pass membrane
protein {ECO:0000269|PubMed:19108721}.
-!- DEVELOPMENTAL STAGE: Predominantly found in the prespores of the
slug. {ECO:0000269|PubMed:14686953}.
-!- SIMILARITY: Belongs to the ammonia transporter channel (TC
1.A.11.2) family. {ECO:0000305}.
-----------------------------------------------------------------------
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EMBL; AF510717; AAP47146.1; -; mRNA.
EMBL; AB049068; BAB39710.1; -; Genomic_DNA.
EMBL; AAFI02000023; EAL68117.1; -; Genomic_DNA.
RefSeq; XP_642123.1; XM_637031.1.
ProteinModelPortal; Q9BLG3; -.
STRING; 44689.DDB0214902; -.
TCDB; 1.A.11.2.9; the ammonium transporter channel (amt) family.
PaxDb; Q9BLG3; -.
EnsemblProtists; EAL68117; EAL68117; DDB_G0277889.
GeneID; 8621332; -.
KEGG; ddi:DDB_G0277889; -.
dictyBase; DDB_G0277889; amtB.
eggNOG; KOG0682; Eukaryota.
eggNOG; COG0004; LUCA.
InParanoid; Q9BLG3; -.
KO; K03320; -.
OMA; MFAAMTW; -.
PhylomeDB; Q9BLG3; -.
PRO; PR:Q9BLG3; -.
Proteomes; UP000002195; Chromosome 3.
Proteomes; UP000002195; Unassembled WGS sequence.
GO; GO:0031164; C:contractile vacuolar membrane; IEA:UniProtKB-SubCell.
GO; GO:0036020; C:endolysosome membrane; IDA:dictyBase.
GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
GO; GO:0030670; C:phagocytic vesicle membrane; IDA:dictyBase.
GO; GO:0005886; C:plasma membrane; IDA:dictyBase.
GO; GO:0008519; F:ammonium transmembrane transporter activity; ISS:dictyBase.
GO; GO:0072488; P:ammonium transmembrane transport; IBA:GO_Central.
GO; GO:0015696; P:ammonium transport; IMP:dictyBase.
GO; GO:0007588; P:excretion; IMP:dictyBase.
GO; GO:0015695; P:organic cation transport; IBA:GO_Central.
Gene3D; 1.10.3430.10; -; 1.
InterPro; IPR029020; Ammonium/urea_transptr.
InterPro; IPR001905; Ammonium_transpt.
InterPro; IPR018047; Ammonium_transpt_CS.
InterPro; IPR024041; NH4_transpt_AmtB-like_dom.
Pfam; PF00909; Ammonium_transp; 1.
TIGRFAMs; TIGR00836; amt; 1.
PROSITE; PS01219; AMMONIUM_TRANSP; 1.
1: Evidence at protein level;
Ammonia transport; Cell membrane; Complete proteome;
Cytoplasmic vesicle; Endosome; Lysosome; Membrane; Reference proteome;
Transmembrane; Transmembrane helix; Transport; Vacuole.
CHAIN 1 431 Ammonium transporter 2.
/FTId=PRO_0000365574.
TOPO_DOM 1 19 Extracellular.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 20 40 Helical. {ECO:0000255}.
TOPO_DOM 41 56 Cytoplasmic.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 57 77 Helical. {ECO:0000255}.
TOPO_DOM 78 101 Extracellular.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 102 122 Helical. {ECO:0000255}.
TOPO_DOM 123 129 Cytoplasmic.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 130 150 Helical. {ECO:0000255}.
TOPO_DOM 151 162 Extracellular.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 163 183 Helical. {ECO:0000255}.
TOPO_DOM 184 206 Cytoplasmic.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 207 227 Helical. {ECO:0000255}.
TOPO_DOM 228 246 Extracellular.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 247 267 Helical. {ECO:0000255}.
TOPO_DOM 268 276 Cytoplasmic.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 277 295 Helical. {ECO:0000255}.
TOPO_DOM 296 300 Extracellular.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 301 319 Helical. {ECO:0000255}.
TOPO_DOM 320 326 Cytoplasmic.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 327 347 Helical. {ECO:0000255}.
TOPO_DOM 348 378 Extracellular.
{ECO:0000269|PubMed:19108721}.
TRANSMEM 379 399 Helical. {ECO:0000255}.
TOPO_DOM 400 431 Cytoplasmic.
{ECO:0000269|PubMed:19108721}.
SEQUENCE 431 AA; 46368 MW; F8C578EA381F22E8 CRC64;
MEYLELNGTK EGLSAAVDDM WVLNATYLVF YMQAGFCMLE AGVVRAKNAK SIIMKSIIDT
AIGSLLFWAL GFGLAFGNAD KASNPVIGTS HFFLINYQNL SFFAFQWAFC ATSITIVSGS
LAERVHVTSC LVYTIVMSAF IYPLSAHWVW SYNGWLRMIG FNGIIDFSGS IVVHIVGGCI
GLVGTYLVGP RIGRFDSESG KPKPLPGHSI TIYTLGAFII WYGFYGFNTG STLGISGGGI
AIASRSAVTM TIIACASCAT TLLAIKIKSG KYDVVKSVNS LLGGLVSSAA VCSLIDPWAA
FIIGCVTSFV YLGCSHLLIK LRIDDPLDSS AIHLGCGIWG ALSVGLFSTQ ENLSLVLKKS
TNVYGLFFGG GFEQLGIQLL GIIIVMAWCF FCASILFTIL KKFHLLRIEP TKELMGIDID
SAGGPAYQWD N


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