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Anaerobic dimethyl sulfoxide reductase chain YnfH (DMSO reductase anchor subunit YnfH)

 YNFH_ECOLI              Reviewed;         284 AA.
P76173; P77142;
18-OCT-2001, integrated into UniProtKB/Swiss-Prot.
01-FEB-1997, sequence version 1.
28-MAR-2018, entry version 116.
RecName: Full=Anaerobic dimethyl sulfoxide reductase chain YnfH;
AltName: Full=DMSO reductase anchor subunit YnfH;
Name=ynfH; OrderedLocusNames=b1590, JW5261;
Escherichia coli (strain K12).
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Enterobacteriaceae; Escherichia.
NCBI_TaxID=83333;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
PubMed=9097039; DOI=10.1093/dnares/3.6.363;
Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M.,
Makino K., Miki T., Mizobuchi K., Mori H., Mori T., Motomura K.,
Nakade S., Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N.,
Sampei G., Seki Y., Sivasundaram S., Tagami H., Takeda J.,
Takemoto K., Takeuchi Y., Wada C., Yamamoto Y., Horiuchi T.;
"A 570-kb DNA sequence of the Escherichia coli K-12 genome
corresponding to the 28.0-40.1 min region on the linkage map.";
DNA Res. 3:363-377(1996).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
PubMed=9278503; DOI=10.1126/science.277.5331.1453;
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J.,
Mau B., Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1462(1997).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
PubMed=16738553; DOI=10.1038/msb4100049;
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains
MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
[4]
DISRUPTION PHENOTYPE.
STRAIN=K12 / BW25113;
PubMed=25316676; DOI=10.1093/bioinformatics/btu671;
Vlasblom J., Zuberi K., Rodriguez H., Arnold R., Gagarinova A.,
Deineko V., Kumar A., Leung E., Rizzolo K., Samanfar B., Chang L.,
Phanse S., Golshani A., Greenblatt J.F., Houry W.A., Emili A.,
Morris Q., Bader G., Babu M.;
"Novel function discovery with GeneMANIA: a new integrated resource
for gene function prediction in Escherichia coli.";
Bioinformatics 31:306-310(2015).
-!- FUNCTION: Terminal reductase during anaerobic growth on various
sulfoxide and N-oxide compounds. The C subunit anchors the other
two subunits to the membrane and stabilize the catalytic subunits
(By similarity). {ECO:0000250}.
-!- SUBUNIT: The complex consists of three subunits: YnfF, the
reductase; YnfG, an electron transfer protein, and YnfH, a
membrane anchor protein. {ECO:0000305}.
-!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000250}; Multi-
pass membrane protein {ECO:0000250}.
-!- DISRUPTION PHENOTYPE: Cells grow to slightly higher density than
wild-type in sublethal levels of streptomycin (PubMed:25316676).
{ECO:0000269|PubMed:25316676}.
-!- SIMILARITY: To E.coli DmsC. {ECO:0000305}.
-----------------------------------------------------------------------
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EMBL; U00096; AAC74662.1; -; Genomic_DNA.
EMBL; AP009048; BAA15314.2; -; Genomic_DNA.
PIR; H64914; H64914.
RefSeq; NP_416107.1; NC_000913.3.
RefSeq; WP_000526503.1; NZ_LN832404.1.
ProteinModelPortal; P76173; -.
BioGrid; 4263479; 7.
STRING; 316385.ECDH10B_1723; -.
TCDB; 5.A.3.3.1; the prokaryotic molybdopterin-containing oxidoreductase (pmo) family.
PaxDb; P76173; -.
PRIDE; P76173; -.
EnsemblBacteria; AAC74662; AAC74662; b1590.
EnsemblBacteria; BAA15314; BAA15314; BAA15314.
GeneID; 945822; -.
KEGG; ecj:JW5261; -.
KEGG; eco:b1590; -.
PATRIC; fig|1411691.4.peg.672; -.
EchoBASE; EB3607; -.
EcoGene; EG13846; ynfH.
eggNOG; ENOG4107KGK; Bacteria.
eggNOG; COG3302; LUCA.
HOGENOM; HOG000118381; -.
KO; K07312; -.
OMA; MTRVYQI; -.
BioCyc; EcoCyc:G6848-MONOMER; -.
BioCyc; MetaCyc:G6848-MONOMER; -.
PRO; PR:P76173; -.
Proteomes; UP000000318; Chromosome.
Proteomes; UP000000625; Chromosome.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
GO; GO:0019645; P:anaerobic electron transport chain; IEA:InterPro.
InterPro; IPR007059; DmsC.
PANTHER; PTHR38095; PTHR38095; 1.
Pfam; PF04976; DmsC; 1.
3: Inferred from homology;
Cell inner membrane; Cell membrane; Complete proteome; Membrane;
Oxidoreductase; Reference proteome; Transmembrane;
Transmembrane helix.
CHAIN 1 284 Anaerobic dimethyl sulfoxide reductase
chain YnfH.
/FTId=PRO_0000168967.
TOPO_DOM 1 9 Periplasmic. {ECO:0000255}.
TRANSMEM 10 30 Helical. {ECO:0000255}.
TOPO_DOM 31 45 Cytoplasmic. {ECO:0000255}.
TRANSMEM 46 66 Helical. {ECO:0000255}.
TOPO_DOM 67 86 Periplasmic. {ECO:0000255}.
TRANSMEM 87 107 Helical. {ECO:0000255}.
TOPO_DOM 108 115 Cytoplasmic. {ECO:0000255}.
TRANSMEM 116 136 Helical. {ECO:0000255}.
TOPO_DOM 137 148 Periplasmic. {ECO:0000255}.
TRANSMEM 149 169 Helical. {ECO:0000255}.
TOPO_DOM 170 180 Cytoplasmic. {ECO:0000255}.
TRANSMEM 181 201 Helical. {ECO:0000255}.
TOPO_DOM 202 222 Periplasmic. {ECO:0000255}.
TRANSMEM 223 243 Helical. {ECO:0000255}.
TOPO_DOM 244 250 Cytoplasmic. {ECO:0000255}.
TRANSMEM 251 271 Helical. {ECO:0000255}.
TOPO_DOM 272 284 Periplasmic. {ECO:0000255}.
SEQUENCE 284 AA; 30524 MW; 73F7D760FC4B1344 CRC64;
MGNGWHEWPL VIFTVLGQCV VGALIVSGIG WFAAKNDADR QRIVRGMFFL WLLMGVGFIA
SVMHLGSPLR AFNSLNRIGA SGLSNEIAAG SIFFAVGGLW WLVAVIGKMP QALGKLWLLF
SMALGVIFVW MMTCVYQIDT VPTWHNGYTT LAFFLTVLLS GPILAAAILR AARVTFNTTP
FAIISVLALI ACAGVIVLQG LSLASIHSSV QQASALVPDY ASLQVWRVVL LCAGLGCWLC
PLIRRREPHV AGLILGLILI LGGEMIGRVL FYGLHMTVGM AIAG


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