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Aquaporin TIP3-1 (Alpha-tonoplast intrinsic protein) (Alpha-TIP) (Tonoplast intrinsic protein 3-1) (AtTIP3;1) [Cleaved into: Aquaporin TIP3-1, N-terminally processed]

 TIP31_ARATH             Reviewed;         268 AA.
P26587;
01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
01-AUG-1992, sequence version 1.
30-AUG-2017, entry version 147.
RecName: Full=Aquaporin TIP3-1;
AltName: Full=Alpha-tonoplast intrinsic protein;
Short=Alpha-TIP;
AltName: Full=Tonoplast intrinsic protein 3-1;
Short=AtTIP3;1;
Contains:
RecName: Full=Aquaporin TIP3-1, N-terminally processed;
Name=TIP3-1; OrderedLocusNames=At1g73190; ORFNames=T18K17.14;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, SUBCELLULAR LOCATION, AND
TISSUE SPECIFICITY.
STRAIN=cv. Columbia;
PubMed=16668923; DOI=10.1104/pp.99.2.561;
Hoefte H.R., Hubbard L., Reizer J., Ludevid D., Kerman E.M.,
Chrispeels M.J.;
"Vegetative and seed-specific forms of tonoplast intrinsic protein in
the vacuolar membrane of Arabidopsis thaliana.";
Plant Physiol. 99:561-570(1992).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=11130712; DOI=10.1038/35048500;
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S.,
White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y.,
Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W.,
Chung M.K., Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K.,
Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y.,
Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L.,
Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E.,
Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B.,
Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P.,
Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A.,
Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I.,
Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D.,
Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M.,
Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M.,
Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.;
"Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana.";
Nature 408:816-820(2000).
[3]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
genome.";
Science 302:842-846(2003).
[5]
TISSUE SPECIFICITY.
PubMed=8624437; DOI=10.1105/tpc.8.4.587;
Daniels M.J., Chaumont F., Mirkov T.E., Chrispeels M.J.;
"Characterization of a new vacuolar membrane aquaporin sensitive to
mercury at a unique site.";
Plant Cell 8:587-599(1996).
[6]
NOMENCLATURE.
PubMed=11806824;
Quigley F., Rosenberg J.M., Shachar-Hill Y., Bohnert H.J.;
"From genome to function: the Arabidopsis aquaporins.";
Genome Biol. 3:RESEARCH0001.1-RESEARCH0001.17(2002).
-!- FUNCTION: Water channel required to facilitate the transport of
water from the vacuolar compartment to the cytoplasm.
{ECO:0000269|PubMed:16668923}.
-!- SUBCELLULAR LOCATION: Vacuole membrane
{ECO:0000269|PubMed:16668923}; Multi-pass membrane protein
{ECO:0000269|PubMed:16668923}. Note=Tonoplast. It is specifically
located in the tonoplast of protein storage vacuoles (PSV) of the
embryo and endosperm.
-!- TISSUE SPECIFICITY: Predominantly expressed in developing embryos
(seeds). Also expressed in green siliques.
{ECO:0000269|PubMed:16668923, ECO:0000269|PubMed:8624437}.
-!- DOMAIN: Aquaporins contain two tandem repeats each containing
three membrane-spanning domains and a pore-forming loop with the
signature motif Asn-Pro-Ala (NPA).
-!- SIMILARITY: Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP
(TC 1.A.8.10) subfamily. {ECO:0000305}.
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EMBL; X63551; CAA45114.1; -; Genomic_DNA.
EMBL; M84343; AAA32748.1; -; Genomic_DNA.
EMBL; AC010556; AAG52132.1; -; Genomic_DNA.
EMBL; CP002684; AEE35427.1; -; Genomic_DNA.
EMBL; AY064054; AAL36410.1; -; mRNA.
EMBL; AY117339; AAM51414.1; -; mRNA.
PIR; S22201; S22201.
RefSeq; NP_177462.1; NM_105978.4.
UniGene; At.27087; -.
UniGene; At.66872; -.
ProteinModelPortal; P26587; -.
SMR; P26587; -.
BioGrid; 28872; 5.
IntAct; P26587; 5.
STRING; 3702.AT1G73190.1; -.
TCDB; 1.A.8.10.1; the major intrinsic protein (mip) family.
PaxDb; P26587; -.
EnsemblPlants; AT1G73190.1; AT1G73190.1; AT1G73190.
GeneID; 843653; -.
Gramene; AT1G73190.1; AT1G73190.1; AT1G73190.
KEGG; ath:AT1G73190; -.
Araport; AT1G73190; -.
TAIR; locus:2197279; AT1G73190.
eggNOG; KOG0223; Eukaryota.
eggNOG; COG0580; LUCA.
HOGENOM; HOG000288286; -.
InParanoid; P26587; -.
KO; K09873; -.
OMA; TQPFWKA; -.
OrthoDB; EOG09360J95; -.
PhylomeDB; P26587; -.
Reactome; R-ATH-432047; Passive transport by Aquaporins.
PRO; PR:P26587; -.
Proteomes; UP000006548; Chromosome 1.
ExpressionAtlas; P26587; baseline and differential.
Genevisible; P26587; AT.
GO; GO:0042807; C:central vacuole; IDA:TAIR.
GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
GO; GO:0009705; C:plant-type vacuole membrane; IDA:TAIR.
GO; GO:0000326; C:protein storage vacuole; IDA:TAIR.
GO; GO:0015250; F:water channel activity; IBA:GO_Central.
GO; GO:0006914; P:autophagy; TAS:TAIR.
GO; GO:0034220; P:ion transmembrane transport; IBA:GO_Central.
CDD; cd00333; MIP; 1.
Gene3D; 1.20.1080.10; -; 1.
InterPro; IPR023271; Aquaporin-like.
InterPro; IPR034294; Aquaporin_transptr.
InterPro; IPR000425; MIP.
InterPro; IPR022357; MIP_CS.
PANTHER; PTHR19139; PTHR19139; 1.
Pfam; PF00230; MIP; 1.
PRINTS; PR00783; MINTRINSICP.
SUPFAM; SSF81338; SSF81338; 1.
TIGRFAMs; TIGR00861; MIP; 1.
PROSITE; PS00221; MIP; 1.
2: Evidence at transcript level;
Acetylation; Complete proteome; Membrane; Reference proteome; Repeat;
Transmembrane; Transmembrane helix; Transport; Vacuole.
CHAIN 1 268 Aquaporin TIP3-1.
/FTId=PRO_0000425762.
INIT_MET 1 1 Removed; alternate.
{ECO:0000250|UniProtKB:Q41951}.
CHAIN 2 268 Aquaporin TIP3-1, N-terminally processed.
/FTId=PRO_0000064014.
TOPO_DOM 2 26 Cytoplasmic. {ECO:0000255}.
TRANSMEM 27 47 Helical; Name=1. {ECO:0000255}.
TOPO_DOM 48 64 Vacuolar. {ECO:0000255}.
TRANSMEM 65 85 Helical; Name=2. {ECO:0000255}.
TOPO_DOM 86 108 Cytoplasmic. {ECO:0000255}.
TRANSMEM 109 129 Helical; Name=3. {ECO:0000255}.
TOPO_DOM 130 146 Vacuolar. {ECO:0000255}.
TRANSMEM 147 167 Helical; Name=4. {ECO:0000255}.
TOPO_DOM 168 178 Cytoplasmic. {ECO:0000255}.
TRANSMEM 179 199 Helical; Name=5. {ECO:0000255}.
TOPO_DOM 200 225 Vacuolar. {ECO:0000255}.
TRANSMEM 226 246 Helical; Name=6. {ECO:0000255}.
TOPO_DOM 247 268 Cytoplasmic. {ECO:0000255}.
MOTIF 93 95 NPA 1.
MOTIF 207 209 NPA 2.
MOD_RES 1 1 N-acetylmethionine.
{ECO:0000250|UniProtKB:P61837}.
MOD_RES 2 2 N-acetylalanine; in Aquaporin TIP3-1, N-
terminally processed.
{ECO:0000250|UniProtKB:Q41951}.
SEQUENCE 268 AA; 28308 MW; E9D6C84D1DA1E4BA CRC64;
MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAA EGSILSLDKL YWEHAAHAGT
NTPGGLILVA LAHAFALFAA VSAAINVSGG HVNPAVTFGA LVGGRVTAIR AIYYWIAQLL
GAILACLLLR LTTNGMRPVG FRLASGVGAV NGLVLEIILT FGLVYVVYST LIDPKRGSLG
IIAPLAIGLI VGANILVGGP FSGASMNPAR AFGPALVGWR WHDHWIYWVG PFIGSALAAL
IYEYMVIPTE PPTHHAHGVH QPLAPEDY


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