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BOC cell adhesion-associated, oncogene-regulated

 D4A0Z7_RAT              Unreviewed;      1108 AA.
D4A0Z7;
20-APR-2010, integrated into UniProtKB/TrEMBL.
22-JUL-2015, sequence version 2.
27-SEP-2017, entry version 64.
SubName: Full=BOC cell adhesion-associated, oncogene-regulated {ECO:0000313|Ensembl:ENSRNOP00000002790};
Name=Boc {ECO:0000313|Ensembl:ENSRNOP00000002790,
ECO:0000313|RGD:1304550};
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000002790, ECO:0000313|Proteomes:UP000002494};
[1] {ECO:0000313|Ensembl:ENSRNOP00000002790, ECO:0000313|Proteomes:UP000002494}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000002790,
ECO:0000313|Proteomes:UP000002494};
PubMed=15057822; DOI=10.1038/nature02426;
Rat Genome Sequencing Project Consortium;
Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
Collins F.S.;
"Genome sequence of the Brown Norway rat yields insights into
mammalian evolution.";
Nature 428:493-521(2004).
[2] {ECO:0000313|Ensembl:ENSRNOP00000002790}
IDENTIFICATION.
STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000002790};
Ensembl;
Submitted (JUL-2011) to UniProtKB.
-!- CAUTION: The sequence shown here is derived from an Ensembl
automatic analysis pipeline and should be considered as
preliminary data. {ECO:0000313|Ensembl:ENSRNOP00000002790}.
-----------------------------------------------------------------------
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EMBL; AABR07034265; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AABR07072238; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AC141993; -; NOT_ANNOTATED_CDS; Genomic_DNA.
RefSeq; XP_017453649.1; XM_017598160.1.
RefSeq; XP_017459841.1; XM_017604352.1.
UniGene; Rn.51907; -.
STRING; 10116.ENSRNOP00000002790; -.
PaxDb; D4A0Z7; -.
Ensembl; ENSRNOT00000002790; ENSRNOP00000002790; ENSRNOG00000002041.
GeneID; 360715; -.
UCSC; RGD:1304550; rat.
CTD; 91653; -.
RGD; 1304550; Boc.
eggNOG; ENOG410IHIH; Eukaryota.
eggNOG; ENOG410XSVT; LUCA.
GeneTree; ENSGT00840000129688; -.
OMA; YTMVPLG; -.
OrthoDB; EOG091G00TB; -.
TreeFam; TF332268; -.
Reactome; R-RNO-375170; CDO in myogenesis.
Reactome; R-RNO-5635838; Activation of SMO.
Proteomes; UP000002494; Chromosome 11.
Bgee; ENSRNOG00000002041; -.
GO; GO:0044295; C:axonal growth cone; IDA:RGD.
GO; GO:0005887; C:integral component of plasma membrane; IEA:InterPro.
GO; GO:0007411; P:axon guidance; IEA:InterPro.
GO; GO:0045663; P:positive regulation of myoblast differentiation; IEA:InterPro.
GO; GO:0007224; P:smoothened signaling pathway; IEA:InterPro.
CDD; cd00063; FN3; 3.
Gene3D; 2.60.40.10; -; 8.
InterPro; IPR032982; BOC.
InterPro; IPR003961; FN3_dom.
InterPro; IPR007110; Ig-like_dom.
InterPro; IPR013783; Ig-like_fold.
InterPro; IPR013098; Ig_I-set.
InterPro; IPR003599; Ig_sub.
InterPro; IPR003598; Ig_sub2.
InterPro; IPR013151; Immunoglobulin.
PANTHER; PTHR10489:SF799; PTHR10489:SF799; 1.
Pfam; PF00041; fn3; 3.
Pfam; PF07679; I-set; 1.
Pfam; PF00047; ig; 1.
SMART; SM00060; FN3; 3.
SMART; SM00409; IG; 4.
SMART; SM00408; IGc2; 4.
SUPFAM; SSF48726; SSF48726; 4.
SUPFAM; SSF49265; SSF49265; 2.
PROSITE; PS50853; FN3; 3.
PROSITE; PS50835; IG_LIKE; 4.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000002494};
Immunoglobulin domain {ECO:0000256|SAAS:SAAS00442402};
Membrane {ECO:0000256|SAM:Phobius};
Reference proteome {ECO:0000313|Proteomes:UP000002494};
Repeat {ECO:0000256|SAAS:SAAS00657665};
Signal {ECO:0000256|SAM:SignalP};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius}.
SIGNAL 1 25 {ECO:0000256|SAM:SignalP}.
CHAIN 26 1108 {ECO:0000256|SAM:SignalP}.
/FTId=PRO_5003053133.
TRANSMEM 849 872 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 31 118 Ig-like. {ECO:0000259|PROSITE:PS50835}.
DOMAIN 134 208 Ig-like. {ECO:0000259|PROSITE:PS50835}.
DOMAIN 229 299 Ig-like. {ECO:0000259|PROSITE:PS50835}.
DOMAIN 318 402 Ig-like. {ECO:0000259|PROSITE:PS50835}.
DOMAIN 468 565 Fibronectin type-III.
{ECO:0000259|PROSITE:PS50853}.
DOMAIN 602 697 Fibronectin type-III.
{ECO:0000259|PROSITE:PS50853}.
DOMAIN 706 806 Fibronectin type-III.
{ECO:0000259|PROSITE:PS50853}.
SEQUENCE 1108 AA; 120938 MW; 05074C16EF3FED5F CRC64;
MVTCRGEQPM LTLLWFLLAI AGCLADLNEV PQVTVQPMST VQKLGGTVIL GCVVEPPWVN
VTWRFNGKEL NGSDDALGVL ITRGTLVIAA LNNHTVGRYQ CVARMPAGAV ASVPATVTLA
NLQDFKLDVQ HVIEVDEGNT AVIACHLPES HPKAQVRYSV KQEWLEASRD NYLIMPSGNL
QIVNASQEDE GTYKCAAYNP VTQEVKTSGS SDRLRVRRST AEAARIIYPL EAQTVIVTKG
QSLILECVAS GIPPPRVTWA KDGSSIAAYN KTRFLLSNLL IDTTSEEDSG TYRCMASNGV
GDPGAAVILY NVQVFEPPEV TVELSQLVIP WGQSAKLTCE VRGNPPPSVL WLRNAVPLSS
NQRLRLSRKA LRVVSVRPED EGVYQCMAEN AVGSAHAVVQ LRTARPDTTL RPGRDTKPIA
ATPPMPPSRP NRPDQMLREQ PGLVKPPTSV QPTSLKCLGE EQVAPAEAPV ILSSPRTSKT
DSYELVWRPR HEGSSRAPIL YYVVKHRKVT NSSDDWIISG IPANQHHLTL TRLDPGSLYE
VEMAAYNCAG EGQTAMVTFR TGRRPKPEIV ASKEQQIQRD DPGASLQSSS QPDHGRLSPP
EAPDRPTIST ASETSVYVTW IPRGNGGFPI QSFRVEYKKL KKVGDWILAT SAIPPSRLSV
EITGLEKGIS YKFRVRALNM LGESEPSAPS RPYVVSGYSG RVYERPVAGP YITFTDAVNE
TTIMLKWMYI PASNNNTPIH GFYIYYRPTD SDNDSDYKKD MVEGDRYWHS ISHLQPETSY
DIKMQCFNEG GESEFSNVMI CETKARKFSG QPGRPPPLTL APPQPPPLEA MERPMGTGAM
VARASDLPYL IVGVVLGSIV LIIVTFIPFC LWRAWSKQKH TTDLGFPRSA LLSSSCQYTM
VPLGGLPGHQ ANGQPYLSGI GGRACVSRLH GSRGYPAATV GCPGRKLQQH CPGELAQRED
SNSLLRQPIV SNGYDLQNQQ VARGTKSGSE EGSFLYTLPD DSTHQLLQPQ DCCHLQKQPV
TTCQTAVRRA PEGPGLEASW DPQYHSGPRC CLGLVPVEEV DSSDSCQVGG GDCCPQHPSG
TYTGQELGVR LSPSPSVHVS FETPPPTI


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