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Baseplate puncturing device gp5.4 (Gene product 5.4) (gp5.4)

 NEEDL_BPT4              Reviewed;          97 AA.
P39234;
01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
01-FEB-1995, sequence version 1.
15-FEB-2017, entry version 53.
RecName: Full=Baseplate puncturing device gp5.4 {ECO:0000303|PubMed:27193680};
AltName: Full=Gene product 5.4;
Short=gp5.4;
Name=5.4; Synonyms=y08B;
Enterobacteria phage T4 (Bacteriophage T4).
Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae;
Tevenvirinae; T4virus.
NCBI_TaxID=10665;
NCBI_TaxID=562; Escherichia coli.
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=12626685; DOI=10.1128/MMBR.67.1.86-156.2003;
Miller E.S., Kutter E., Mosig G., Arisaka F., Kunisawa T., Ruger W.;
"Bacteriophage T4 genome.";
Microbiol. Mol. Biol. Rev. 67:86-156(2003).
[2] {ECO:0000244|PDB:4KU0}
X-RAY CRYSTALLOGRAPHY (1.15 ANGSTROMS) OF 2-97 IN COMPLEX WITH IRON,
COFACTOR, AND FUNCTION.
Buth S.A., Leiman P.G., Shneider M.M.;
"Crystall structute of the business end of the T4 cell-puncturing
device.";
Submitted (MAY-2013) to the PDB data bank.
[3] {ECO:0000244|PDB:5IV5}
STRUCTURE BY ELECTRON MICROSCOPY (4.11 ANGSTROMS), SUBUNIT,
SUBCELLULAR LOCATION, FUNCTION, INTERACTION WITH GP27, AND INTERACTION
WITH GP5.
PubMed=27193680; DOI=10.1038/nature17971;
Taylor N.M., Prokhorov N.S., Guerrero-Ferreira R.C., Shneider M.M.,
Browning C., Goldie K.N., Stahlberg H., Leiman P.G.;
"Structure of the T4 baseplate and its function in triggering sheath
contraction.";
Nature 533:346-352(2016).
-!- FUNCTION: Baseplate central spike complex-associated protein.
Makes the tip of the central spike which probably punctures the
host outer membrane, a necessary step for viral DNA ejection into
the host cell. {ECO:0000305|PubMed:27193680, ECO:0000305|Ref.2}.
-!- COFACTOR:
Name=Fe cation; Xref=ChEBI:CHEBI:24875;
Evidence={ECO:0000269|Ref.2};
-!- SUBUNIT: Heteromultimer with gp27 trimer and gp5 trimer; this
interaction forms the tail lysozyme complex that creates an
extension of the tail tube (PubMed:27193680). Part of the
baseplate macromolecular complex which consists of gp5, gp5.4,
gp27 (central spike complex); gp6, gp25, gp53 (inner baseplate);
gp7, gp8 (intermediate baseplate); gp9, gp10, gp11, gp12
(peripheral); gp48 and gp54 (proximal region of the tail tube).
{ECO:0000269|PubMed:27193680}.
-!- SUBCELLULAR LOCATION: Virion {ECO:0000269|PubMed:27193680}.
Note=Present in the baseplate. {ECO:0000269|PubMed:27193680}.
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EMBL; AF158101; AAD42485.1; -; Genomic_DNA.
RefSeq; NP_049763.1; NC_000866.4.
PDB; 4KU0; X-ray; 1.15 A; D=2-97.
PDB; 5IV5; EM; 4.11 A; ZA=1-97.
PDBsum; 4KU0; -.
PDBsum; 5IV5; -.
SMR; P39234; -.
GeneID; 1258818; -.
KEGG; vg:1258818; -.
OrthoDB; VOG090001E6; -.
Proteomes; UP000009087; Genome.
GO; GO:0098025; C:virus tail, baseplate; IDA:UniProtKB.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
InterPro; IPR008727; PAAR_motif.
Pfam; PF05488; PAAR_motif; 1.
1: Evidence at protein level;
3D-structure; Complete proteome; Iron; Metal-binding;
Reference proteome; Virion.
CHAIN 1 97 Baseplate puncturing device gp5.4.
/FTId=PRO_0000165155.
METAL 14 14 Iron; via tele nitrogen.
{ECO:0000244|PDB:4KU0}.
METAL 46 46 Iron; via tele nitrogen.
{ECO:0000244|PDB:4KU0}.
METAL 56 56 Iron; via tele nitrogen.
{ECO:0000244|PDB:4KU0}.
METAL 83 83 Iron. {ECO:0000244|PDB:4KU0}.
STRAND 28 31 {ECO:0000244|PDB:4KU0}.
STRAND 34 36 {ECO:0000244|PDB:4KU0}.
STRAND 65 69 {ECO:0000244|PDB:4KU0}.
STRAND 72 74 {ECO:0000244|PDB:4KU0}.
STRAND 92 96 {ECO:0000244|PDB:4KU0}.
SEQUENCE 97 AA; 10221 MW; D7C63CD65737C824 CRC64;
MSGLSYDKCV TAGHEAWPPT VVNATQSKVF TGGIAVLVAG DPITEHTEIK KPYETHGGVT
QPRTSKVYVT GKKAVQMADP ISCGDTVAQA SSKVFIK


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