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Bcl-2-interacting killer (Apoptosis inducer NBK) (BIP1) (BP4)

 BIK_HUMAN               Reviewed;         160 AA.
Q13323; Q16582; Q6FH93;
01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
01-NOV-1997, sequence version 2.
12-SEP-2018, entry version 151.
RecName: Full=Bcl-2-interacting killer;
AltName: Full=Apoptosis inducer NBK;
AltName: Full=BIP1;
AltName: Full=BP4;
Name=BIK; Synonyms=NBK;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=B-cell;
PubMed=7478623;
Boyd J.M., Gallo G.J., Elangovan B., Houghton A.B., Malstrom S.,
Avery B.J., Ebb R.G., Subramanian T., Chittenden T., Lutz R.J.,
Chinnadurai G.;
"Bik, a novel death-inducing protein shares a distinct sequence motif
with Bcl-2 family proteins and interacts with viral and cellular
survival-promoting proteins.";
Oncogene 11:1921-1928(1995).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=8816500; DOI=10.1128/MCB.16.10.5857;
Han J., Sabbatini P., White E.;
"Induction of apoptosis by human Nbk/Bik, a BH3-containing protein
that interacts with E1B 19K.";
Mol. Cell. Biol. 16:5857-5864(1996).
[3]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Lymphoid tissue;
Pun K.-T., Farrow S.N., Raven T., Wride C.J., White J.H.M., Brown R.;
"E1B-19K interacts with a novel apoptotic inducer, NBK.";
Submitted (JUL-1995) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=10500065; DOI=10.1016/S0016-5085(99)70341-0;
Castells A., Ino Y., Louis D.N., Ramesh V., Gusella J.F., Rustgi A.K.;
"Mapping of a target region of allelic loss to a 0.5-cM interval on
chromosome 22q13 in human colorectal cancer.";
Gastroenterology 117:831-837(1999).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
PubMed=15461802; DOI=10.1186/gb-2004-5-10-r84;
Collins J.E., Wright C.L., Edwards C.A., Davis M.P., Grinham J.A.,
Cole C.G., Goward M.E., Aguado B., Mallya M., Mokrab Y., Huckle E.J.,
Beare D.M., Dunham I.;
"A genome annotation-driven approach to cloning the human ORFeome.";
Genome Biol. 5:R84.1-R84.11(2004).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S.,
Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y.,
Phelan M., Farmer A.;
"Cloning of human full-length CDSs in BD Creator(TM) system donor
vector.";
Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
[7]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANT LYS-19.
NIEHS SNPs program;
Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases.
[8]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.;
"Cloning of human full open reading frames in Gateway(TM) system entry
vector (pDONR201).";
Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
[9]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=10591208; DOI=10.1038/990031;
Dunham I., Hunt A.R., Collins J.E., Bruskiewich R., Beare D.M.,
Clamp M., Smink L.J., Ainscough R., Almeida J.P., Babbage A.K.,
Bagguley C., Bailey J., Barlow K.F., Bates K.N., Beasley O.P.,
Bird C.P., Blakey S.E., Bridgeman A.M., Buck D., Burgess J.,
Burrill W.D., Burton J., Carder C., Carter N.P., Chen Y., Clark G.,
Clegg S.M., Cobley V.E., Cole C.G., Collier R.E., Connor R.,
Conroy D., Corby N.R., Coville G.J., Cox A.V., Davis J., Dawson E.,
Dhami P.D., Dockree C., Dodsworth S.J., Durbin R.M., Ellington A.G.,
Evans K.L., Fey J.M., Fleming K., French L., Garner A.A.,
Gilbert J.G.R., Goward M.E., Grafham D.V., Griffiths M.N.D., Hall C.,
Hall R.E., Hall-Tamlyn G., Heathcott R.W., Ho S., Holmes S.,
Hunt S.E., Jones M.C., Kershaw J., Kimberley A.M., King A.,
Laird G.K., Langford C.F., Leversha M.A., Lloyd C., Lloyd D.M.,
Martyn I.D., Mashreghi-Mohammadi M., Matthews L.H., Mccann O.T.,
Mcclay J., Mclaren S., McMurray A.A., Milne S.A., Mortimore B.J.,
Odell C.N., Pavitt R., Pearce A.V., Pearson D., Phillimore B.J.C.T.,
Phillips S.H., Plumb R.W., Ramsay H., Ramsey Y., Rogers L., Ross M.T.,
Scott C.E., Sehra H.K., Skuce C.D., Smalley S., Smith M.L.,
Soderlund C., Spragon L., Steward C.A., Sulston J.E., Swann R.M.,
Vaudin M., Wall M., Wallis J.M., Whiteley M.N., Willey D.L.,
Williams L., Williams S.A., Williamson H., Wilmer T.E., Wilming L.,
Wright C.L., Hubbard T., Bentley D.R., Beck S., Rogers J., Shimizu N.,
Minoshima S., Kawasaki K., Sasaki T., Asakawa S., Kudoh J.,
Shintani A., Shibuya K., Yoshizaki Y., Aoki N., Mitsuyama S.,
Roe B.A., Chen F., Chu L., Crabtree J., Deschamps S., Do A., Do T.,
Dorman A., Fang F., Fu Y., Hu P., Hua A., Kenton S., Lai H., Lao H.I.,
Lewis J., Lewis S., Lin S.-P., Loh P., Malaj E., Nguyen T., Pan H.,
Phan S., Qi S., Qian Y., Ray L., Ren Q., Shaull S., Sloan D., Song L.,
Wang Q., Wang Y., Wang Z., White J., Willingham D., Wu H., Yao Z.,
Zhan M., Zhang G., Chissoe S., Murray J., Miller N., Minx P.,
Fulton R., Johnson D., Bemis G., Bentley D., Bradshaw H., Bourne S.,
Cordes M., Du Z., Fulton L., Goela D., Graves T., Hawkins J.,
Hinds K., Kemp K., Latreille P., Layman D., Ozersky P., Rohlfing T.,
Scheet P., Walker C., Wamsley A., Wohldmann P., Pepin K., Nelson J.,
Korf I., Bedell J.A., Hillier L.W., Mardis E., Waterston R.,
Wilson R., Emanuel B.S., Shaikh T., Kurahashi H., Saitta S.,
Budarf M.L., McDermid H.E., Johnson A., Wong A.C.C., Morrow B.E.,
Edelmann L., Kim U.J., Shizuya H., Simon M.I., Dumanski J.P.,
Peyrard M., Kedra D., Seroussi E., Fransson I., Tapia I., Bruder C.E.,
O'Brien K.P., Wilkinson P., Bodenteich A., Hartman K., Hu X.,
Khan A.S., Lane L., Tilahun Y., Wright H.;
"The DNA sequence of human chromosome 22.";
Nature 402:489-495(1999).
[10]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
Venter J.C.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[11]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Lymph;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[12]
MUTAGENESIS, AND FUNCTION OF BH3 MOTIF.
PubMed=8521816;
Chittenden T., Flemington C., Houghton A.B., Ebb R.G., Gallo G.J.,
Elangovan B., Chinnadurai G., Lutz R.J.;
"A conserved domain in Bak, distinct from BH1 and BH2, mediates cell
death and protein binding functions.";
EMBO J. 14:5589-5596(1995).
[13]
CLEAVAGE BY RHBDD1, INTERACTION WITH RHBDD1, AND MUTAGENESIS OF
153-GLY-PHE-154.
PubMed=18953687; DOI=10.1007/s00018-008-8452-0;
Wang Y., Guan X., Fok K.L., Li S., Zhang X., Miao S., Zong S.,
Koide S.S., Chan H.C., Wang L.;
"A novel member of the Rhomboid family, RHBDD1, regulates BIK-mediated
apoptosis.";
Cell. Mol. Life Sci. 65:3822-3829(2008).
-!- FUNCTION: Accelerates programmed cell death. Association to the
apoptosis repressors Bcl-X(L), BHRF1, Bcl-2 or its adenovirus
homolog E1B 19k protein suppresses this death-promoting activity.
Does not interact with BAX. {ECO:0000269|PubMed:8521816}.
-!- SUBUNIT: Interacts with RHBDL4/RHBDD1.
{ECO:0000269|PubMed:18953687}.
-!- INTERACTION:
P10415:BCL2; NbExp=5; IntAct=EBI-700794, EBI-77694;
Q16548:BCL2A1; NbExp=7; IntAct=EBI-700794, EBI-1003550;
A0A0S2Z3D2:BCL2L1; NbExp=3; IntAct=EBI-700794, EBI-16431449;
Q07817:BCL2L1; NbExp=12; IntAct=EBI-700794, EBI-78035;
Q07817-1:BCL2L1; NbExp=4; IntAct=EBI-700794, EBI-287195;
Q9HD36:BCL2L10; NbExp=2; IntAct=EBI-700794, EBI-2126349;
Q92843:BCL2L2; NbExp=17; IntAct=EBI-700794, EBI-707714;
Q969F0:FATE1; NbExp=6; IntAct=EBI-700794, EBI-743099;
-!- SUBCELLULAR LOCATION: Endomembrane system; Single-pass membrane
protein. Mitochondrion membrane {ECO:0000250}; Single-pass
membrane protein {ECO:0000250}. Note=Around the nuclear envelope,
and in cytoplasmic membranes.
-!- DOMAIN: Intact BH3 motif is required by BIK, BID, BAK, BAD and BAX
for their pro-apoptotic activity and for their interaction with
anti-apoptotic members of the Bcl-2 family.
-!- PTM: Proteolytically cleaved by RHBDL4/RHBDD1. RHBDL4/RHBDD1-
induced cleavage is a necessary step prior its degradation by the
proteosome-dependent mechanism. {ECO:0000269|PubMed:18953687}.
-!- WEB RESOURCE: Name=NIEHS-SNPs;
URL="http://egp.gs.washington.edu/data/bik/";
-----------------------------------------------------------------------
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EMBL; U34584; AAC50413.1; -; mRNA.
EMBL; U49730; AAC79124.1; -; mRNA.
EMBL; X89986; CAA62013.1; -; mRNA.
EMBL; AF174424; AAF01156.1; -; Genomic_DNA.
EMBL; AF174421; AAF01156.1; JOINED; Genomic_DNA.
EMBL; AF174422; AAF01156.1; JOINED; Genomic_DNA.
EMBL; AF174423; AAF01156.1; JOINED; Genomic_DNA.
EMBL; CR456390; CAG30276.1; -; mRNA.
EMBL; BT006728; AAP35374.1; -; mRNA.
EMBL; AY245248; AAO61089.1; -; Genomic_DNA.
EMBL; CR541863; CAG46661.1; -; mRNA.
EMBL; CR541883; CAG46681.1; -; mRNA.
EMBL; AL022237; CAA18260.2; -; Genomic_DNA.
EMBL; CH471138; EAW73282.1; -; Genomic_DNA.
EMBL; BC001599; AAH01599.1; -; mRNA.
CCDS; CCDS14044.1; -.
PIR; S58214; S58214.
RefSeq; NP_001188.1; NM_001197.4.
UniGene; Hs.475055; -.
PDB; 2IPE; Model; -; @=1-160.
PDBsum; 2IPE; -.
ProteinModelPortal; Q13323; -.
SMR; Q13323; -.
BioGrid; 107107; 13.
ComplexPortal; CPX-309; BIK:BCL-w complex.
DIP; DIP-928N; -.
ELM; Q13323; -.
IntAct; Q13323; 96.
MINT; Q13323; -.
STRING; 9606.ENSP00000216115; -.
iPTMnet; Q13323; -.
PhosphoSitePlus; Q13323; -.
BioMuta; BIK; -.
DMDM; 2493284; -.
PaxDb; Q13323; -.
PeptideAtlas; Q13323; -.
PRIDE; Q13323; -.
ProteomicsDB; 59311; -.
DNASU; 638; -.
Ensembl; ENST00000216115; ENSP00000216115; ENSG00000100290.
GeneID; 638; -.
KEGG; hsa:638; -.
UCSC; uc003bdk.3; human.
CTD; 638; -.
DisGeNET; 638; -.
EuPathDB; HostDB:ENSG00000100290.2; -.
GeneCards; BIK; -.
HGNC; HGNC:1051; BIK.
HPA; HPA051360; -.
MIM; 603392; gene.
neXtProt; NX_Q13323; -.
OpenTargets; ENSG00000100290; -.
PharmGKB; PA25354; -.
eggNOG; ENOG410JHX0; Eukaryota.
eggNOG; ENOG41116I0; LUCA.
GeneTree; ENSGT00530000064453; -.
HOGENOM; HOG000095229; -.
HOVERGEN; HBG001515; -.
InParanoid; Q13323; -.
KO; K18452; -.
OMA; IYDQTED; -.
OrthoDB; EOG091G0VGV; -.
PhylomeDB; Q13323; -.
TreeFam; TF338339; -.
SIGNOR; Q13323; -.
GeneWiki; Bcl-2-interacting_killer; -.
GenomeRNAi; 638; -.
PRO; PR:Q13323; -.
Proteomes; UP000005640; Chromosome 22.
Bgee; ENSG00000100290; Expressed in 125 organ(s), highest expression level in nasal cavity epithelium.
CleanEx; HS_BIK; -.
ExpressionAtlas; Q13323; baseline and differential.
Genevisible; Q13323; HS.
GO; GO:0012505; C:endomembrane system; IEA:UniProtKB-SubCell.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0031966; C:mitochondrial membrane; IEA:UniProtKB-SubCell.
GO; GO:0006915; P:apoptotic process; TAS:UniProtKB.
GO; GO:0008584; P:male gonad development; IBA:GO_Central.
GO; GO:0032464; P:positive regulation of protein homooligomerization; IDA:BHF-UCL.
GO; GO:0090200; P:positive regulation of release of cytochrome c from mitochondria; IDA:BHF-UCL.
InterPro; IPR024579; Bcl2-int_killer.
InterPro; IPR020728; Bcl2_BH3_motif_CS.
PANTHER; PTHR15018; PTHR15018; 1.
Pfam; PF12201; bcl-2I13; 1.
ProDom; PD032623; PD032623; 1.
PROSITE; PS01259; BH3; 1.
1: Evidence at protein level;
3D-structure; Apoptosis; Complete proteome; Membrane; Mitochondrion;
Polymorphism; Reference proteome; Transmembrane; Transmembrane helix.
CHAIN 1 160 Bcl-2-interacting killer.
/FTId=PRO_0000143100.
TRANSMEM 136 156 Helical. {ECO:0000255}.
REGION 137 158 Leucine-zipper. {ECO:0000255}.
MOTIF 57 71 BH3.
SITE 153 154 Cleavage; by RHBDL4/RHBDD1.
{ECO:0000305}.
VARIANT 19 19 E -> K (in dbSNP:rs4988415).
{ECO:0000269|Ref.7}.
/FTId=VAR_029179.
VARIANT 26 26 T -> I (in dbSNP:rs11090143).
/FTId=VAR_048420.
VARIANT 148 148 L -> P (in dbSNP:rs11574527).
/FTId=VAR_029180.
MUTAGEN 153 154 GG->FF: Inhibits RHBDL4/RHBDD1-induced
cleavage. {ECO:0000269|PubMed:18953687}.
SEQUENCE 160 AA; 18016 MW; 89034F4443F5A136 CRC64;
MSEVRPLSRD ILMETLLYEQ LLEPPTMEVL GMTDSEEDLD PMEDFDSLEC MEGSDALALR
LACIGDEMDV SLRAPRLAQL SEVAMHSLGL AFIYDQTEDI RDVLRSFMDG FTTLKENIMR
FWRSPNPGSW VSCEQVLLAL LLLLALLLPL LSGGLHLLLK


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