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Benzene 1,2-dioxygenase subunit beta (EC 1.14.12.3) (Benzene 1,2-dioxygenase P2 subunit) (Toluene 2,3-dioxygenase subunit beta) (EC 1.14.12.11)

 BNZB_PSEP1              Reviewed;         187 AA.
A5W4F1; P08085; P13451;
15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
10-JUL-2007, sequence version 1.
07-JUN-2017, entry version 57.
RecName: Full=Benzene 1,2-dioxygenase subunit beta;
EC=1.14.12.3;
AltName: Full=Benzene 1,2-dioxygenase P2 subunit;
AltName: Full=Toluene 2,3-dioxygenase subunit beta;
EC=1.14.12.11;
Name=bnzB; Synonyms=todC2; OrderedLocusNames=Pput_2880;
Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1).
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
NCBI_TaxID=351746;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 1-12.
PubMed=2670929;
Zylstra G.J., Gibson D.T.;
"Toluene degradation by Pseudomonas putida F1. Nucleotide sequence of
the todC1C2BADE genes and their expression in Escherichia coli.";
J. Biol. Chem. 264:14940-14946(1989).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 700007 / DSM 6899 / BCRC 17059 / F1;
US DOE Joint Genome Institute;
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Parales R.,
Richardson P.;
"Complete sequence of Pseudomonas putida F1.";
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Catalyzes both the oxidation of benzene and toluene. The
beta subunit may be responsible for the substrate specificity of
the enzyme.
-!- CATALYTIC ACTIVITY: Benzene + NADH + O(2) = cis-cyclohexa-3,5-
diene-1,2-diol + NAD(+).
-!- CATALYTIC ACTIVITY: Toluene + NADH + O(2) = (1S,2R)-3-
methylcyclohexa-3,5-diene-1,2-diol + NAD(+).
-!- COFACTOR:
Name=[2Fe-2S] cluster; Xref=ChEBI:CHEBI:49601;
Evidence={ECO:0000250};
Note=Binds 1 [2Fe-2S] cluster per subunit. {ECO:0000250};
-!- COFACTOR:
Name=Fe cation; Xref=ChEBI:CHEBI:24875; Evidence={ECO:0000250};
Note=Binds 1 Fe cation per subunit. {ECO:0000250};
-!- PATHWAY: Aromatic compound metabolism; benzene degradation;
catechol from benzene: step 1/2.
-!- PATHWAY: Xenobiotic degradation; toluene degradation.
-!- PATHWAY: Xenobiotic degradation; xylene degradation.
-!- SUBUNIT: This dioxygenase system consists of four proteins: the
two subunits of the hydroxylase component (BnzA and BnzB), a
ferredoxin (BnzC) and a ferredoxin reductase (BnzD).
-!- SIMILARITY: Belongs to the bacterial ring-hydroxylating
dioxygenase beta subunit family. {ECO:0000305}.
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EMBL; J04996; AAA26006.1; -; Genomic_DNA.
EMBL; CP000712; ABQ79011.1; -; Genomic_DNA.
PIR; B29830; B29830.
RefSeq; WP_012052600.1; NC_009512.1.
PDB; 3EN1; X-ray; 3.20 A; B=1-187.
PDB; 3EQQ; X-ray; 3.20 A; B=1-187.
PDBsum; 3EN1; -.
PDBsum; 3EQQ; -.
ProteinModelPortal; A5W4F1; -.
SMR; A5W4F1; -.
STRING; 351746.Pput_2880; -.
EnsemblBacteria; ABQ79011; ABQ79011; Pput_2880.
KEGG; ppf:Pput_2880; -.
eggNOG; ENOG4108SBK; Bacteria.
eggNOG; COG5517; LUCA.
HOGENOM; HOG000106036; -.
KO; K16268; -.
OMA; YRSQKER; -.
UniPathway; UPA00228; -.
UniPathway; UPA00272; UER00391.
UniPathway; UPA00273; -.
EvolutionaryTrace; A5W4F1; -.
Proteomes; UP000006553; Chromosome.
GO; GO:0018619; F:benzene 1,2-dioxygenase activity; IEA:UniProtKB-EC.
GO; GO:0018624; F:toluene dioxygenase activity; IEA:UniProtKB-EC.
GO; GO:0042203; P:toluene catabolic process; IEA:UniProtKB-UniPathway.
GO; GO:0042184; P:xylene catabolic process; IEA:UniProtKB-UniPathway.
CDD; cd00667; ring_hydroxylating_dioxygenase; 1.
InterPro; IPR032710; NTF2-like_dom.
InterPro; IPR000391; Rng_hydr_dOase-bsu.
Pfam; PF00866; Ring_hydroxyl_B; 1.
SUPFAM; SSF54427; SSF54427; 1.
1: Evidence at protein level;
3D-structure; Aromatic hydrocarbons catabolism; Complete proteome;
Dioxygenase; Direct protein sequencing; NAD; Oxidoreductase.
CHAIN 1 187 Benzene 1,2-dioxygenase subunit beta.
/FTId=PRO_0000314466.
HELIX 10 12 {ECO:0000244|PDB:3EN1}.
HELIX 20 38 {ECO:0000244|PDB:3EN1}.
HELIX 42 47 {ECO:0000244|PDB:3EN1}.
STRAND 49 58 {ECO:0000244|PDB:3EN1}.
HELIX 65 70 {ECO:0000244|PDB:3EN1}.
STRAND 79 83 {ECO:0000244|PDB:3EN1}.
HELIX 85 94 {ECO:0000244|PDB:3EN1}.
HELIX 101 103 {ECO:0000244|PDB:3EN1}.
STRAND 108 120 {ECO:0000244|PDB:3EN1}.
STRAND 126 139 {ECO:0000244|PDB:3EN1}.
TURN 140 142 {ECO:0000244|PDB:3EN1}.
STRAND 143 157 {ECO:0000244|PDB:3EN1}.
STRAND 159 162 {ECO:0000244|PDB:3EN1}.
STRAND 164 174 {ECO:0000244|PDB:3EN1}.
STRAND 176 181 {ECO:0000244|PDB:3EN1}.
SEQUENCE 187 AA; 22013 MW; 39A5D2BECB6116B5 CRC64;
MIDSANRADV FLRKPAPVAP ELQHEVEQFY YWEAKLLNDR RFEEWFALLA EDIHYFMPIR
TTRIMRDSRL EYSGSREYAH FDDDATMMKG RLRKITSDVS WSENPASRTR HLVSNVMIVG
AEAEGEYEIS SAFIVYRNRL ERQLDIFAGE RRDTLRRNTS EAGFEIVNRT ILIDQSTILA
NNLSFFF


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