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Beta-4-galactosyltransferase 7 (EC 2.4.1.-) (EC 2.4.1.133) (FI08434p)

 Q9VBZ9_DROME            Unreviewed;       322 AA.
Q9VBZ9;
01-MAY-2000, integrated into UniProtKB/TrEMBL.
01-MAY-2000, sequence version 1.
05-DEC-2018, entry version 143.
SubName: Full=Beta-4-galactosyltransferase 7 {ECO:0000313|EMBL:AAF56377.1};
EC=2.4.1.- {ECO:0000313|EMBL:AAF56377.1};
EC=2.4.1.133 {ECO:0000313|EMBL:AAF56377.1};
SubName: Full=FI08434p {ECO:0000313|EMBL:ACH95293.1};
Name=beta4GalT7 {ECO:0000313|EMBL:AAF56377.1,
ECO:0000313|FlyBase:FBgn0039258};
Synonyms=beta-4GalT7 {ECO:0000313|FlyBase:FBgn0039258},
beta4Gal-T7 {ECO:0000313|EMBL:AAF56377.1},
beta4GalT7-RA {ECO:0000313|EMBL:ACH95293.1},
beta4GalTI {ECO:0000313|EMBL:AAF56377.1},
betaGalT7 {ECO:0000313|EMBL:AAF56377.1},
Dbeta4GalT7 {ECO:0000313|EMBL:AAF56377.1},
dbeta4GalT7 {ECO:0000313|EMBL:AAF56377.1},
dbeta4GalTI {ECO:0000313|EMBL:AAF56377.1},
dGAGbeta4GalTI {ECO:0000313|EMBL:AAF56377.1},
Dmel\CG11780 {ECO:0000313|EMBL:AAF56377.1},
GalT {ECO:0000313|EMBL:AAF56377.1},
GalTI {ECO:0000313|EMBL:AAF56377.1};
ORFNames=CG11780 {ECO:0000313|EMBL:AAF56377.1,
ECO:0000313|FlyBase:FBgn0039258},
Dmel_CG11780 {ECO:0000313|EMBL:AAF56377.1};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAF56377.1, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AAF56377.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AAF56377.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[3] {ECO:0000313|EMBL:AAF56377.1, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000313|EMBL:AAF56377.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002).
[5] {ECO:0000313|EMBL:AAF56377.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[6] {ECO:0000313|EMBL:AAF56377.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[7] {ECO:0000313|EMBL:AAF56377.1}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|EMBL:AAF56377.1}
NUCLEOTIDE SEQUENCE.
O'Boyle S.T.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AAF56377.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[10] {ECO:0000313|EMBL:AAF56377.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[11] {ECO:0000313|EMBL:ACH95293.1}
NUCLEOTIDE SEQUENCE.
Han Y., Li G., Jiang D.;
Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases.
[12] {ECO:0000213|PDB:3LW6}
X-RAY CRYSTALLOGRAPHY (1.81 ANGSTROMS) OF 71-311 IN COMPLEX WITH
MANGANESE AND UDP, AND DISULFIDE BONDS.
PubMed=20236943; DOI=10.1074/jbc.M109.099564;
Ramakrishnan B., Qasba P.K.;
"Crystal structure of the catalytic domain of Drosophila beta1,4-
Galactosyltransferase-7.";
J. Biol. Chem. 285:15619-15626(2010).
[13] {ECO:0000213|PDB:4LW3, ECO:0000213|PDB:4LW6, ECO:0000213|PDB:4M4K}
X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) OF 71-311 IN COMPLEX WITH
MANGANESE AND UDP, AND DISULFIDE BONDS.
PubMed=24052259; DOI=10.1074/jbc.M113.509984;
Tsutsui Y., Ramakrishnan B., Qasba P.K.;
"Crystal structures of beta-1,4-galactosyltransferase 7 enzyme reveal
conformational changes and substrate Binding.";
J. Biol. Chem. 288:31963-31970(2013).
[14] {ECO:0000313|EMBL:AAF56377.1}
NUCLEOTIDE SEQUENCE.
PubMed=26109357; DOI=.1534/g3.115.018929;
FlyBase Consortium;
Matthews B.B., Dos Santos G., Crosby M.A., Emmert D.B.,
St Pierre S.E., Gramates L.S., Zhou P., Schroeder A.J., Falls K.,
Strelets V., Russo S.M., Gelbart W.M.;
"Gene Model Annotations for Drosophila melanogaster: Impact of High-
Throughput Data.";
G3 (Bethesda) 5:1721-1736(2015).
[15] {ECO:0000313|EMBL:AAF56377.1}
NUCLEOTIDE SEQUENCE.
PubMed=26109356; DOI=.1534/g3.115.018937;
FlyBase Consortium;
Crosby M.A., Gramates L.S., Dos Santos G., Matthews B.B.,
St Pierre S.E., Zhou P., Schroeder A.J., Falls K., Emmert D.B.,
Russo S.M., Gelbart W.M.;
"Gene Model Annotations for Drosophila melanogaster: The Rule-
Benders.";
G3 (Bethesda) 5:1737-1749(2015).
[16] {ECO:0000313|EMBL:AAF56377.1}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
-----------------------------------------------------------------------
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EMBL; AE014297; AAF56377.1; -; Genomic_DNA.
EMBL; BT044519; ACH95293.1; -; mRNA.
RefSeq; NP_651319.2; NM_143062.3.
UniGene; Dm.12932; -.
PDB; 3LW6; X-ray; 1.81 A; A=71-311.
PDB; 4LW3; X-ray; 2.00 A; A=71-311.
PDB; 4LW6; X-ray; 2.40 A; A=71-311.
PDB; 4M4K; X-ray; 2.20 A; A=71-311.
STRING; 7227.FBpp0084130; -.
CAZy; GT7; Glycosyltransferase Family 7.
EnsemblMetazoa; FBtr0084755; FBpp0084130; FBgn0039258.
GeneID; 42991; -.
KEGG; dme:Dmel_CG11780; -.
UCSC; CG11780-RA; d. melanogaster.
CTD; 42991; -.
FlyBase; FBgn0039258; beta4GalT7.
eggNOG; KOG3917; Eukaryota.
eggNOG; ENOG410Z0TP; LUCA.
GeneTree; ENSGT00940000157712; -.
KO; K00733; -.
OMA; INQVDHY; -.
OrthoDB; EOG091G0HCH; -.
Reactome; R-DME-1971475; A tetrasaccharide linker sequence is required for GAG synthesis.
ChiTaRS; beta4GalT7; fly.
GenomeRNAi; 42991; -.
Proteomes; UP000000803; Chromosome 3R.
Bgee; FBgn0039258; Expressed in 29 organ(s), highest expression level in secondary oocyte.
GO; GO:0005794; C:Golgi apparatus; IDA:FlyBase.
GO; GO:0016021; C:integral component of membrane; ISS:FlyBase.
GO; GO:0008378; F:galactosyltransferase activity; NAS:FlyBase.
GO; GO:0046872; F:metal ion binding; ISS:FlyBase.
GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO; GO:0046525; F:xylosylprotein 4-beta-galactosyltransferase activity; IDA:FlyBase.
GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
GO; GO:0030206; P:chondroitin sulfate biosynthetic process; NAS:FlyBase.
GO; GO:0015012; P:heparan sulfate proteoglycan biosynthetic process; NAS:FlyBase.
GO; GO:0006491; P:N-glycan processing; IDA:FlyBase.
GO; GO:0030166; P:proteoglycan biosynthetic process; IDA:FlyBase.
Gene3D; 3.90.550.10; -; 1.
InterPro; IPR003859; Galactosyl_T.
InterPro; IPR027791; Galactosyl_T_C.
InterPro; IPR027995; Galactosyl_T_N.
InterPro; IPR029044; Nucleotide-diphossugar_trans.
PANTHER; PTHR19300; PTHR19300; 1.
Pfam; PF02709; Glyco_transf_7C; 1.
Pfam; PF13733; Glyco_transf_7N; 1.
PRINTS; PR02050; B14GALTRFASE.
SUPFAM; SSF53448; SSF53448; 1.
1: Evidence at protein level;
3D-structure {ECO:0000213|PDB:3LW6, ECO:0000213|PDB:4LW3,
ECO:0000213|PDB:4LW6, ECO:0000213|PDB:4M4K};
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Glycosyltransferase {ECO:0000313|EMBL:AAF56377.1};
Manganese {ECO:0000213|PDB:3LW6, ECO:0000213|PDB:4LW3,
ECO:0000213|PDB:4LW6, ECO:0000213|PDB:4M4K};
Membrane {ECO:0000256|SAM:Phobius};
Metal-binding {ECO:0000213|PDB:3LW6, ECO:0000213|PDB:4LW3,
ECO:0000213|PDB:4LW6, ECO:0000213|PDB:4M4K};
Nucleotide-binding {ECO:0000213|PDB:3LW6, ECO:0000213|PDB:4LW6};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Transferase {ECO:0000313|EMBL:AAF56377.1};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius}.
TRANSMEM 7 30 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 72 158 Glyco_transf_7N.
{ECO:0000259|Pfam:PF13733}.
DOMAIN 165 241 Glyco_transf_7C.
{ECO:0000259|Pfam:PF02709}.
NP_BIND 82 86 UDP. {ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW6}.
NP_BIND 146 147 UDP. {ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW6}.
NP_BIND 241 243 UDP. {ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW6}.
METAL 147 147 Manganese. {ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW3,
ECO:0000213|PDB:4LW6}.
METAL 241 241 Manganese; via tele nitrogen.
{ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW3,
ECO:0000213|PDB:4LW6}.
METAL 243 243 Manganese; via pros nitrogen.
{ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW3,
ECO:0000213|PDB:4LW6}.
BINDING 121 121 UDP. {ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW6}.
BINDING 177 177 UDP. {ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW6}.
BINDING 207 207 UDP. {ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW6}.
BINDING 250 250 UDP. {ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW6}.
DISULFID 255 310 {ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW3,
ECO:0000213|PDB:4LW6}.
DISULFID 300 308 {ECO:0000213|PDB:3LW6,
ECO:0000213|PDB:4LW3,
ECO:0000213|PDB:4LW6}.
SEQUENCE 322 AA; 36499 MW; 1F44CF6577ACC0A2 CRC64;
MVNISTINWV FVCGLSFCLG GIAVLSLMPL GSDCVCPLSN PLAKLAGGGE GVSVIKKEPA
DEKQPQPHDH GASVHKMALL VPFRDRFEEL LQFVPHMTAF LKRQGVAHHI FVLNQVDRFR
FNRASLINVG FQFASDVYDY IAMHDVDLLP LNDNLLYEYP SSLGPLHIAG PKLHPKYHYD
NFVGGILLVR REHFKQMNGM SNQYWGWGLE DDEFFVRIRD AGLQVTRPQN IKTGTNDTFS
HIHNRYHRKR DTQKCFNQKE MTRKRDHKTG LDNVKYKILK VHEMLIDQVP VTILNILLDC
DVNKTPWCDC SGTAAAASAV QT


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