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Beta-agarase B (EC 3.2.1.81)

 AGAB_VIBS7              Reviewed;         955 AA.
P48840;
01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
01-FEB-1996, sequence version 1.
10-MAY-2017, entry version 56.
RecName: Full=Beta-agarase B;
EC=3.2.1.81;
Name=agaB;
Vibrio sp. (strain JT0107).
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
NCBI_TaxID=47913;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=8193156; DOI=10.1016/0167-4781(94)90109-0;
Sugano Y., Matsumoto T., Noma M.;
"Sequence analysis of the agaB gene encoding a new beta-agarase from
Vibrio sp. strain JT0107.";
Biochim. Biophys. Acta 1218:105-108(1994).
-!- FUNCTION: Hydrolyzes agarose to yield predominantly
neoagarotetraose and neoagarohexaose.
-!- CATALYTIC ACTIVITY: Hydrolysis of (1->4)-beta-D-galactosidic
linkages in agarose, giving the tetramer as the predominant
product.
-!- SIMILARITY: Belongs to the glycosyl hydrolase 50 family.
{ECO:0000305}.
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EMBL; D21202; BAA04744.1; -; Genomic_DNA.
PIR; S46651; S46651.
ProteinModelPortal; P48840; -.
SMR; P48840; -.
CAZy; GH50; Glycoside Hydrolase Family 50.
GO; GO:0009341; C:beta-galactosidase complex; IEA:InterPro.
GO; GO:0033916; F:beta-agarase activity; IEA:UniProtKB-EC.
GO; GO:0004565; F:beta-galactosidase activity; IEA:InterPro.
GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
InterPro; IPR013529; Glyco_hydro_42_N.
InterPro; IPR017853; Glycoside_hydrolase_SF.
Pfam; PF02449; Glyco_hydro_42; 1.
SUPFAM; SSF51445; SSF51445; 1.
PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
3: Inferred from homology;
Glycosidase; Hydrolase.
CHAIN 1 955 Beta-agarase B.
/FTId=PRO_0000057698.
SEQUENCE 955 AA; 105977 MW; 6E54555DDA8BD215 CRC64;
MVEVMKFTKN KIAALLSLTL LGVYGCGSTP SSSDAEGAVE DVGGTIPDFE SAAFFKKVKK
DHRKAEVVSD QGVTSGSSAL KVNFDSVSEA NKFKYWPNVK VHPDSGFWNW NAKGSLSLDI
TNPTDSPANI ILKLADNVGV MGSGDNQLNY AVNVPAGETV PVEMLFNGTK RKLDGYWGGE
KINLRNIVEF QIFVQGPMDA QTVIIDNFNL VDATGDFIEA SGQEVKVSGP IPTVASITSF
DEGQPTFVAF DRSAAATVTE LKTDMGGLLA VKLAATNAYP NITFKAPQPW DWSEYGDFSL
AFDLESKADE PLQLFVRVDD AENENWGGTA NGVVDSMSSY VTLAPGDDGT FYLPLGQTGS
QIVSGMRAEP PKKSYNAQAI SYGWGEKSLD TSNIVSFQLY LQNPTKDAEF NIKSVRLIPN
IDADATRYEG LIDQYGQFTG SEWPKKITED EELETMGKLA KMSLKSTSQM PGRSIYGGWA
DGPKLKGTGF FRTEKVDGKW SLVDPQGNLF FATGVDNIRM DDTVTITGHD FADKDKRSGK
EVASEVRRSM FTWLPEDDDV LAENYDYANW VHSGALKKGE VFSFYGANLQ RKYGGTFSEA
EKVWKDITID RMVDWGFTTL GNWADPMFYD NKKVAYVANG WIFGDHARIS TGNDYWGPIH
DPFDPEFVNS VKAMTKKLMT EVDKNDPWMM GVFVDNEISW GNTKNDANHY GLVVNALSYD
MKKSPAKAAF TEHLKEKYWA IEDLNTSWGV KVASWAEFEK SFDHRSRLSK NMKKDYAEML
EMLSAKYFST VRAELKKVLP NHLYLGAPFA DWGVTPEIAK GAAPYVDVMS YNLYAEDLNS
KGDWSKLAEL DKPSIIGEFH FGSTDSGLFH GGIVSAASQQ DRAKKYTNYM NSIADNPYFV
GAHWFQYIDS PTTGRAWDGE NYNVGFVSIT DTPYVPLVEA AKKFNQDVYM LRYKK


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