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Bifunctional lycopene cyclase/phytoene synthase [Includes: Lycopene beta-cyclase (EC 5.5.1.19) (Lycopene cyclase); Phytoene synthase (EC 2.5.1.32)]

 LCPS_SORMK              Reviewed;         602 AA.
D1Z4K7; F7VQC8;
31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
09-FEB-2010, sequence version 1.
20-DEC-2017, entry version 40.
RecName: Full=Bifunctional lycopene cyclase/phytoene synthase;
Includes:
RecName: Full=Lycopene beta-cyclase;
EC=5.5.1.19;
AltName: Full=Lycopene cyclase;
Includes:
RecName: Full=Phytoene synthase;
EC=2.5.1.32;
Name=putative al2; ORFNames=SMAC_01277;
Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) /
K-hell).
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae;
Sordaria.
NCBI_TaxID=771870;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC MYA-333 / DSM 997 / K(L3346) / K-hell;
PubMed=20386741; DOI=10.1371/journal.pgen.1000891;
Nowrousian M., Stajich J.E., Chu M., Engh I., Espagne E., Halliday K.,
Kamerewerd J., Kempken F., Knab B., Kuo H.-C., Osiewacz H.D.,
Poeggeler S., Read N.D., Seiler S., Smith K.M., Zickler D., Kueck U.,
Freitag M.;
"De novo assembly of a 40 Mb eukaryotic genome from short sequence
reads: Sordaria macrospora, a model organism for fungal
morphogenesis.";
PLoS Genet. 6:E1000891-E1000891(2010).
-!- FUNCTION: Bifunctional enzyme that catalyzes the reactions from
geranylgeranyl diphosphate to phytoene (phytoene synthase) and
lycopene to beta-carotene via the intermediate gamma-carotene
(lycopene cyclase). {ECO:0000250}.
-!- CATALYTIC ACTIVITY: Carotenoid psi-end group = carotenoid beta-end
group.
-!- CATALYTIC ACTIVITY: 2 geranylgeranyl diphosphate = 15-cis-phytoene
+ 2 diphosphate.
-!- PATHWAY: Carotenoid biosynthesis; beta-carotene biosynthesis.
-!- PATHWAY: Carotenoid biosynthesis; phytoene biosynthesis; all-
trans-phytoene from geranylgeranyl diphosphate: step 1/1.
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
protein {ECO:0000305}.
-!- SIMILARITY: In the N-terminal section; belongs to the lycopene
beta-cyclase family. {ECO:0000305}.
-!- SIMILARITY: In the C-terminal section; belongs to the
phytoene/squalene synthase family. {ECO:0000305}.
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EMBL; CABT02000004; CCC07710.1; -; Genomic_DNA.
RefSeq; XP_003352443.1; XM_003352395.1.
ProteinModelPortal; D1Z4K7; -.
STRING; 771870.XP_003352443.1; -.
EnsemblFungi; CCC07710; CCC07710; SMAC_01277.
GeneID; 10810077; -.
KEGG; smp:SMAC_01277; -.
EuPathDB; FungiDB:SMAC_01277; -.
eggNOG; ENOG410IFST; Eukaryota.
eggNOG; COG1562; LUCA.
InParanoid; D1Z4K7; -.
KO; K17841; -.
OrthoDB; EOG092C1GQ8; -.
UniPathway; UPA00799; UER00773.
UniPathway; UPA00802; -.
Proteomes; UP000001881; Unassembled WGS sequence.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0004310; F:farnesyl-diphosphate farnesyltransferase activity; IEA:InterPro.
GO; GO:0016767; F:geranylgeranyl-diphosphate geranylgeranyltransferase activity; IEA:UniProtKB-EC.
GO; GO:0016872; F:intramolecular lyase activity; IEA:InterPro.
GO; GO:0051996; F:squalene synthase activity; IEA:InterPro.
GO; GO:0016117; P:carotenoid biosynthetic process; IEA:UniProtKB-KW.
GO; GO:0006696; P:ergosterol biosynthetic process; IEA:InterPro.
CDD; cd00683; Trans_IPPS_HH; 1.
Gene3D; 1.10.600.10; -; 1.
InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
InterPro; IPR017825; Lycopene_cyclase_dom.
InterPro; IPR002060; Squ/phyt_synthse.
InterPro; IPR019845; Squalene/phytoene_synthase_CS.
InterPro; IPR033904; Trans_IPPS_HH.
Pfam; PF00494; SQS_PSY; 1.
SUPFAM; SSF48576; SSF48576; 1.
TIGRFAMs; TIGR03462; CarR_dom_SF; 2.
PROSITE; PS01044; SQUALEN_PHYTOEN_SYN_1; 1.
PROSITE; PS01045; SQUALEN_PHYTOEN_SYN_2; 1.
3: Inferred from homology;
Carotenoid biosynthesis; Complete proteome; Isomerase; Membrane;
Multifunctional enzyme; Reference proteome; Transferase;
Transmembrane; Transmembrane helix.
CHAIN 1 602 Bifunctional lycopene cyclase/phytoene
synthase.
/FTId=PRO_0000409243.
TRANSMEM 6 26 Helical. {ECO:0000255}.
TRANSMEM 30 50 Helical. {ECO:0000255}.
TRANSMEM 76 96 Helical. {ECO:0000255}.
TRANSMEM 118 138 Helical. {ECO:0000255}.
TRANSMEM 146 166 Helical. {ECO:0000255}.
TRANSMEM 168 188 Helical. {ECO:0000255}.
TRANSMEM 230 250 Helical. {ECO:0000255}.
REGION 1 241 Lycopene beta-cyclase.
REGION 248 602 Phytoene synthase.
SEQUENCE 602 AA; 68953 MW; D691CC1ED7B51622 CRC64;
MYDYAFVHLK FTIPLAVLLT AIAYPVLNRI HVIQTGCLIF IAFTAALPWD AYLIEQKVWS
YPPEAIVGPR LLGIPFEELF FFVIQTYITA LVYILFNKPV LHALHLNNQR NPPAWMRIAK
VTGQLILVAL SVWGWKAAQV NQKTTYLGLI LVWACPFLLA IWTLAGRFIL SLPWFVTVLP
VVLPTFYLWA VDELALHRGT WSIGSGTKLE YCLFGKLDIE EATFFLVTNM LIVSGMAVFD
QYLAVIYAFP TLFPKVNRYP TPLMLVQSRL VNTTKYDLER IEGLREAVER LRLKSRSFYL
ANSLFSGRLR IDLILLYSFC RLADDLVDDA KSRLEVLSWT AKLNHFLDQH YGDSDATEDP
KQKAERIDAY IKEAFPPFAY QALHLLPTHI LPPKPLYELI KGFEMDSQFT FHGSSDSTNL
KFPIAHDKDL KTYAIRVAGT VGELCIALII HHCLPDMSDS QKRRLESAAC RMGIALQYVN
IARDILVDAQ IGRVYLPTSW LKEEGLTHKA VLDNPEGPEV IEKMRRRLLD NAFELYREAR
PEMQQIPSEA RGPMIGAVEN YMEIGRVLRE KKVGQVFVRK EGRATVPKQR RLRTLLRALY
EQ


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