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Black, isoform C (EC 4.1.1.11)

 X2J8B3_DROME            Unreviewed;       514 AA.
X2J8B3;
11-JUN-2014, integrated into UniProtKB/TrEMBL.
11-JUN-2014, sequence version 1.
10-OCT-2018, entry version 44.
SubName: Full=Black, isoform C {ECO:0000313|EMBL:AHN54424.1};
EC=4.1.1.11 {ECO:0000313|EMBL:AHN54424.1};
Name=b {ECO:0000313|EMBL:AHN54424.1, ECO:0000313|FlyBase:FBgn0000153};
Synonyms=ADC {ECO:0000313|EMBL:AHN54424.1},
anon-34Db {ECO:0000313|EMBL:AHN54424.1},
B {ECO:0000313|EMBL:AHN54424.1},
BG:DS00941.5 {ECO:0000313|EMBL:AHN54424.1},
cDNA 1 {ECO:0000313|EMBL:AHN54424.1},
CG7811 {ECO:0000313|EMBL:AHN54424.1},
DGad2 {ECO:0000313|EMBL:AHN54424.1},
Dmel\CG7811 {ECO:0000313|EMBL:AHN54424.1},
DmGad2 {ECO:0000313|EMBL:AHN54424.1},
Gad2 {ECO:0000313|EMBL:AHN54424.1},
GAD[[2]] {ECO:0000313|EMBL:AHN54424.1};
ORFNames=CG7811 {ECO:0000313|FlyBase:FBgn0000153},
Dmel_CG7811 {ECO:0000313|EMBL:AHN54424.1};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AHN54424.1, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AHN54424.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AHN54424.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[3] {ECO:0000313|EMBL:AHN54424.1, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000313|EMBL:AHN54424.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002).
[5] {ECO:0000313|EMBL:AHN54424.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[6] {ECO:0000313|EMBL:AHN54424.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[7] {ECO:0000313|EMBL:AHN54424.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[8] {ECO:0000313|EMBL:AHN54424.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
-!- COFACTOR:
Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
Evidence={ECO:0000256|PIRSR:PIRSR602129-50,
ECO:0000256|RuleBase:RU000382};
-!- SIMILARITY: Belongs to the group II decarboxylase family.
{ECO:0000256|RuleBase:RU000382}.
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
-----------------------------------------------------------------------
EMBL; AE014134; AHN54424.1; -; Genomic_DNA.
RefSeq; NP_001285910.1; NM_001298981.1.
UniGene; Dm.2850; -.
ProteinModelPortal; X2J8B3; -.
SMR; X2J8B3; -.
PRIDE; X2J8B3; -.
EnsemblMetazoa; FBtr0342712; FBpp0309589; FBgn0000153.
GeneID; 34791; -.
CTD; 34791; -.
FlyBase; FBgn0000153; b.
eggNOG; KOG0629; Eukaryota.
eggNOG; COG0076; LUCA.
GeneTree; ENSGT00760000119205; -.
OrthoDB; EOG091G07ZU; -.
Reactome; R-DME-1614558; Degradation of cysteine and homocysteine.
Reactome; R-DME-70614; Amino acid synthesis and interconversion (transamination).
ChiTaRS; CG31211; fly.
GenomeRNAi; 34791; -.
Proteomes; UP000000803; Chromosome 2L.
Bgee; FBgn0000153; Expressed in 20 organ(s), highest expression level in adult organism.
ExpressionAtlas; X2J8B3; baseline and differential.
GO; GO:0004068; F:aspartate 1-decarboxylase activity; IMP:FlyBase.
GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
GO; GO:0019483; P:beta-alanine biosynthetic process; TAS:FlyBase.
GO; GO:0048066; P:developmental pigmentation; TAS:FlyBase.
GO; GO:0006212; P:uracil catabolic process; TAS:FlyBase.
GO; GO:0007632; P:visual behavior; IMP:FlyBase.
Gene3D; 3.40.640.10; -; 1.
InterPro; IPR002129; PyrdxlP-dep_de-COase.
InterPro; IPR015424; PyrdxlP-dep_Trfase.
InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
Pfam; PF00282; Pyridoxal_deC; 1.
SUPFAM; SSF53383; SSF53383; 1.
1: Evidence at protein level;
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Lyase {ECO:0000256|RuleBase:RU000382, ECO:0000313|EMBL:AHN54424.1};
Proteomics identification {ECO:0000213|PeptideAtlas:X2J8B3};
Pyridoxal phosphate {ECO:0000256|PIRSR:PIRSR602129-50,
ECO:0000256|RuleBase:RU000382};
Reference proteome {ECO:0000313|Proteomes:UP000000803}.
MOD_RES 326 326 N6-(pyridoxal phosphate)lysine.
{ECO:0000256|PIRSR:PIRSR602129-50}.
SEQUENCE 514 AA; 58477 MW; 2265F7539D76F377 CRC64;
MLANAANNNN NNNNNITSTK DDLSSFVASH PAAEFEGFIR ACVDEIIKLA VFQGTNRSSK
VVEWHEPAEL RQLFDFQLRE QGESQDKLRE LLRETIRFSV KTGHPYFINQ LYSGVDPYAL
VGQWLTDALN PSVYTYEVAP LFTLMEEQVL AEMRRIVGFP NGGQGDGIFC PGGSIANGYA
ISCARYRHSP ESKKNGLFNA KPLIIFTSED AHYSVEKLAM FMGFGSDHVR KIATNEVGKM
RLSDLEKQVK LCLENGWQPL MVSATAGTTV LGAFDDLAGI SEVCKKYNMW MHVDAAWGGG
ALMSKKYRHL LNGIERADSV TWNPHKLLAA SQQCSTFLTR HQQVLAQCHS TNATYLFQKD
KFYDTSFDTG DKHIQCGRRA DVFKFWFMWK AKGTQGLEAH VEKVFRMAEF FTAKVRERPG
FELVLESPEC TNISFWYVPP GLREMERNRE FYDRLHKVAP KVKEGMIKKG SMMITYQPLR
QLPNFFRLVL QNSCLEESDM VYFLDEIESL AQNL


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