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Brachyury protein homolog (ApBra)

 BRA_PATPE               Reviewed;         453 AA.
Q9U903;
28-NOV-2012, integrated into UniProtKB/Swiss-Prot.
01-MAY-2000, sequence version 1.
25-OCT-2017, entry version 76.
RecName: Full=Brachyury protein homolog {ECO:0000303|PubMed:10354483};
AltName: Full=ApBra {ECO:0000312|EMBL:BAA84938.1};
Name=Bra {ECO:0000312|EMBL:BAA84938.1};
Patiria pectinifera (Starfish) (Asterina pectinifera).
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa;
Asteroidea; Valvatacea; Valvatida; Asterinidae; Patiria.
NCBI_TaxID=7594;
[1] {ECO:0000305, ECO:0000312|EMBL:BAA84938.1}
NUCLEOTIDE SEQUENCE [MRNA], AND DEVELOPMENTAL STAGE.
TISSUE=Gastrula {ECO:0000269|PubMed:10354483};
PubMed=10354483; DOI=10.1016/S0925-4773(99)00008-8;
Shoguchi E., Satoh N., Maruyama Y.K.;
"Pattern of Brachyury gene expression in starfish embryos resembles
that of hemichordate embryos but not of sea urchin embryos.";
Mech. Dev. 82:185-189(1999).
[2] {ECO:0000305}
FUNCTION.
PubMed=10831044; DOI=10.1046/j.1440-169x.2000.00481.x;
Shoguchi E., Satoh N., Maruyama Y.K.;
"A starfish homolog of mouse T-brain-1 is expressed in the archenteron
of Asterina pectinifera embryos: possible involvement of two T-box
genes in starfish gastrulation.";
Dev. Growth Differ. 42:61-68(2000).
-!- FUNCTION: May be involved in the transcriptional regulation of
genes required for gastrulation. {ECO:0000269|PubMed:10831044,
ECO:0000305|PubMed:10354483}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-
ProRule:PRU00201, ECO:0000305}.
-!- DEVELOPMENTAL STAGE: First detected 17 hours after insemination at
the vegetal pole in late blastula. In 20 hour gastrula, expressed
around the base of the archenteron and the lateral embryonic wall
but not in the invaginated cells of the archenteron. In 34 hour
gastrula expression persists around the base of the archenteron or
at the blastopore but is not detected in either mesenchyme cells
or the archenteron. In mouth forming embryos and in early
bipinnaria larvae expressed in cells around the blastopore and
anus. Not detected in cells of the mesenchyme and coelomic
vesicles derived from the archenteron.
{ECO:0000269|PubMed:10354483}.
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EMBL; AB018527; BAA84938.1; -; mRNA.
ProteinModelPortal; Q9U903; -.
SMR; Q9U903; -.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IEA:InterPro.
GO; GO:0007275; P:multicellular organism development; IEA:UniProtKB-KW.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
CDD; cd00182; TBOX; 1.
Gene3D; 2.60.40.820; -; 1.
InterPro; IPR008967; p53-like_TF_DNA-bd.
InterPro; IPR036960; T-box_sf.
InterPro; IPR002070; TF_Brachyury.
InterPro; IPR001699; TF_T-box.
InterPro; IPR018186; TF_T-box_CS.
PANTHER; PTHR11267; PTHR11267; 1.
Pfam; PF00907; T-box; 1.
PRINTS; PR00938; BRACHYURY.
PRINTS; PR00937; TBOX.
SMART; SM00425; TBOX; 1.
SUPFAM; SSF49417; SSF49417; 1.
PROSITE; PS01283; TBOX_1; 1.
PROSITE; PS01264; TBOX_2; 1.
PROSITE; PS50252; TBOX_3; 1.
2: Evidence at transcript level;
Developmental protein; DNA-binding; Nucleus; Transcription;
Transcription regulation.
CHAIN 1 453 Brachyury protein homolog.
/FTId=PRO_0000420238.
DNA_BIND 47 217 T-box. {ECO:0000255|PROSITE-
ProRule:PRU00201}.
SEQUENCE 453 AA; 49376 MW; D9B5CFBADCC9FA34 CRC64;
MSADTMRAPT YNVAHLLSAV QSEMTRGSEK GDPSEKGLKV TLEDRDLWRR FSKLTNEMIV
TKTGRRMFPV LSASVTGLNP NAMYSILLDF TPADEHRWKY VNGEWVPGGK PDSPPPSTAY
IHPDSPNFGA HWMKQCVSFS KVKLSNKLNG TGQIMLNSLH KYEPRIHVIR VGGPEKQRLI
RSFSFPETQF IAVTAYQNED ITQLKIKYNP FAKAFLDIKE KGEHEFEDCH DHQQPRYPQL
GSWFLPSAGT LCPPSPHHQF PPSLGMPSPV SHSCAVERYG SLRSHRSTPY PPPPYEQKYS
PTSAYATDST ASSLSLLPAH EAWSPLGSST HHTSNITTSP SHQYGGVWPP VTSSAVQPAS
SCGVGSPVHT SLLRAAYSNY SQPSTSSITG VPRPPAGSMS SSCAGYQNYN SPSEIHGGLN
STDAIGSYPT VGNQLCPGKV GAWSPLTPPS PGV


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