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Broad, isoform O (MIP22851p)

 D8FT05_DROME            Unreviewed;       663 AA.
D8FT05;
05-OCT-2010, integrated into UniProtKB/TrEMBL.
05-OCT-2010, sequence version 1.
22-NOV-2017, entry version 63.
SubName: Full=Broad, isoform O {ECO:0000313|EMBL:AFH07177.1};
SubName: Full=MIP22851p {ECO:0000313|EMBL:ADI62668.1};
Name=br {ECO:0000313|EMBL:AFH07177.1,
ECO:0000313|FlyBase:FBgn0283451};
Synonyms=2B5 {ECO:0000313|EMBL:AFH07177.1},
2Bc {ECO:0000313|EMBL:AFH07177.1}, A18 {ECO:0000313|EMBL:AFH07177.1},
BR {ECO:0000313|EMBL:AFH07177.1}, Br {ECO:0000313|EMBL:AFH07177.1},
BR-C {ECO:0000313|EMBL:AFH07177.1},
BR-c {ECO:0000313|EMBL:AFH07177.1},
Br-C {ECO:0000313|EMBL:AFH07177.1},
br-C {ECO:0000313|EMBL:AFH07177.1},
BR-C Z1 {ECO:0000313|EMBL:AFH07177.1},
Br-C Z2 {ECO:0000313|EMBL:AFH07177.1},
Br-C-Z3 {ECO:0000313|EMBL:AFH07177.1},
br-RG {ECO:0000313|EMBL:ADI62668.1},
BR-Z1 {ECO:0000313|EMBL:AFH07177.1},
br-Z1 {ECO:0000313|EMBL:AFH07177.1},
BR-Z2 {ECO:0000313|EMBL:AFH07177.1},
br-Z2 {ECO:0000313|EMBL:AFH07177.1},
BR-Z3 {ECO:0000313|EMBL:AFH07177.1},
br-Z3 {ECO:0000313|EMBL:AFH07177.1},
BR-Z4 {ECO:0000313|EMBL:AFH07177.1},
Br-Z4 {ECO:0000313|EMBL:AFH07177.1},
br-Z4 {ECO:0000313|EMBL:AFH07177.1},
BR_C {ECO:0000313|EMBL:AFH07177.1}, BRC {ECO:0000313|EMBL:AFH07177.1},
BrC {ECO:0000313|EMBL:AFH07177.1},
BRC-Z1 {ECO:0000313|EMBL:AFH07177.1},
BrC-Z1 {ECO:0000313|EMBL:AFH07177.1},
BRC-Z2 {ECO:0000313|EMBL:AFH07177.1},
BRC-Z3 {ECO:0000313|EMBL:AFH07177.1},
BRC-Z4 {ECO:0000313|EMBL:AFH07177.1},
BrZ3 {ECO:0000313|EMBL:AFH07177.1},
CG11509 {ECO:0000313|EMBL:AFH07177.1},
CG11511 {ECO:0000313|EMBL:AFH07177.1},
CG11514 {ECO:0000313|EMBL:AFH07177.1},
de12 {ECO:0000313|EMBL:AFH07177.1},
Dmel\CG11491 {ECO:0000313|EMBL:AFH07177.1},
ecs {ECO:0000313|EMBL:AFH07177.1},
EG:123F11.1 {ECO:0000313|EMBL:AFH07177.1},
EG:17A9.1 {ECO:0000313|EMBL:AFH07177.1},
EG:25D2.1 {ECO:0000313|EMBL:AFH07177.1},
l(1)2Ba {ECO:0000313|EMBL:AFH07177.1},
l(1)2Bab {ECO:0000313|EMBL:AFH07177.1},
l(1)2Bad {ECO:0000313|EMBL:AFH07177.1},
l(1)2Bb {ECO:0000313|EMBL:AFH07177.1},
l(1)2Bc {ECO:0000313|EMBL:AFH07177.1},
l(1)2Bd {ECO:0000313|EMBL:AFH07177.1},
l(1)d norm-12 {ECO:0000313|EMBL:AFH07177.1},
l(1)d.norm.1 {ECO:0000313|EMBL:AFH07177.1},
l(1)dn1 {ECO:0000313|EMBL:AFH07177.1},
l(1)ESHS5 {ECO:0000313|EMBL:AFH07177.1},
l(1)G0018 {ECO:0000313|EMBL:AFH07177.1},
l(1)G0042 {ECO:0000313|EMBL:AFH07177.1},
l(1)G0284 {ECO:0000313|EMBL:AFH07177.1},
l(1)G0284a {ECO:0000313|EMBL:AFH07177.1},
l(1)G0318 {ECO:0000313|EMBL:AFH07177.1},
l(1)G0401 {ECO:0000313|EMBL:AFH07177.1},
l(1)n34 {ECO:0000313|EMBL:AFH07177.1},
l(1)npr-1 {ECO:0000313|EMBL:AFH07177.1},
l(1)npr1 {ECO:0000313|EMBL:AFH07177.1},
l(1)pp-1 {ECO:0000313|EMBL:AFH07177.1},
l(1)pp-2 {ECO:0000313|EMBL:AFH07177.1},
l(1)PP1 {ECO:0000313|EMBL:AFH07177.1},
l(1)pp1 {ECO:0000313|EMBL:AFH07177.1},
l(1)pp2 {ECO:0000313|EMBL:AFH07177.1},
l(1)ts132 {ECO:0000313|EMBL:AFH07177.1},
l(1)ts144 {ECO:0000313|EMBL:AFH07177.1},
l(1)ts358 {ECO:0000313|EMBL:AFH07177.1},
l(1)ts376 {ECO:0000313|EMBL:AFH07177.1},
npr {ECO:0000313|EMBL:AFH07177.1},
npr-1 {ECO:0000313|EMBL:AFH07177.1},
npr1 {ECO:0000313|EMBL:AFH07177.1},
nprl {ECO:0000313|EMBL:AFH07177.1}, nrp {ECO:0000313|EMBL:AFH07177.1},
nrp1 {ECO:0000313|EMBL:AFH07177.1},
o.c.c {ECO:0000313|EMBL:AFH07177.1},
PP1 {ECO:0000313|EMBL:AFH07177.1}, PP2 {ECO:0000313|EMBL:AFH07177.1},
rbp {ECO:0000313|EMBL:AFH07177.1}, rdp {ECO:0000313|EMBL:AFH07177.1},
rds {ECO:0000313|EMBL:AFH07177.1}, uq {ECO:0000313|EMBL:AFH07177.1},
Z1 {ECO:0000313|EMBL:AFH07177.1}, Z2 {ECO:0000313|EMBL:AFH07177.1},
Z3 {ECO:0000313|EMBL:AFH07177.1}, Z4 {ECO:0000313|EMBL:AFH07177.1};
ORFNames=CG11491 {ECO:0000313|EMBL:AFH07177.1,
ECO:0000313|FlyBase:FBgn0283451},
Dmel_CG11491 {ECO:0000313|EMBL:AFH07177.1};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:ADI62668.1};
[1] {ECO:0000313|EMBL:AFH07177.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AFH07177.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[3] {ECO:0000313|EMBL:AFH07177.1, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000313|EMBL:AFH07177.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002).
[5] {ECO:0000313|EMBL:AFH07177.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[6] {ECO:0000313|EMBL:AFH07177.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[7] {ECO:0000313|EMBL:AFH07177.1}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|EMBL:AFH07177.1}
NUCLEOTIDE SEQUENCE.
Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
Svirskas R., Rubin G.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AFH07177.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[10] {ECO:0000313|EMBL:AFH07177.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[11] {ECO:0000313|EMBL:ADI62668.1}
NUCLEOTIDE SEQUENCE.
Carlson J., Booth B., Frise E., Sandler J., Wan K., Yu C.,
Celniker S.;
Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
[12] {ECO:0000313|EMBL:AFH07177.1}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
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EMBL; BT125021; ADI62668.1; -; mRNA.
EMBL; AE014298; AFH07177.1; -; Genomic_DNA.
RefSeq; NP_001245462.1; NM_001258533.1.
RefSeq; NP_726754.1; NM_166898.2.
UniGene; Dm.20757; -.
EnsemblMetazoa; FBtr0070266; FBpp0070256; FBgn0000210.
EnsemblMetazoa; FBtr0308319; FBpp0300638; FBgn0000210.
GeneID; 44505; -.
CTD; 103946; -.
FlyBase; FBgn0283451; br.
ChiTaRS; Br; fly.
GenomeRNAi; 44505; -.
Proteomes; UP000000803; Chromosome X.
Bgee; FBgn0000210; -.
GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
InterPro; IPR000210; BTB/POZ_dom.
InterPro; IPR011333; SKP1/BTB/POZ_sf.
InterPro; IPR036236; Znf_C2H2_sf.
InterPro; IPR013087; Znf_C2H2_type.
Pfam; PF00651; BTB; 1.
SMART; SM00225; BTB; 1.
SMART; SM00355; ZnF_C2H2; 2.
SUPFAM; SSF54695; SSF54695; 1.
SUPFAM; SSF57667; SSF57667; 1.
PROSITE; PS50097; BTB; 1.
PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
PROSITE; PS50157; ZINC_FINGER_C2H2_2; 2.
2: Evidence at transcript level;
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
DOMAIN 32 97 BTB. {ECO:0000259|PROSITE:PS50097}.
DOMAIN 572 600 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
DOMAIN 602 630 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
SEQUENCE 663 AA; 70534 MW; A91201DDCE557FD6 CRC64;
MDDTQHFCLR WNNYQSSITS AFENLRDDEA FVDVTLACEG RSIKAHRVVL SACSPYFREL
LKSTPCKHPV ILLQDVNFMD LHALVEFIYH GEVNVHQKSL QSFLKTAEVL RVSGLTQQQA
EDTHSHLAQI QNLANSGGRT PLNTHTQSLP HPHHGSLHDD GGSSTLFSRQ GAGSPPPTAV
PSLPSHINNQ LLKRMAMMHR SSAAAAAEET SHAFKRLRGS DNSLPLSGAV GSGSNNNSPD
LPPLHARSAS PQQTPADFST IKHHNNNNTP PLKEEKRNGP TGNGNSGNGN GNGNGASNGN
GISISDKLGS LTPSPLARAG ADDVKSEPMD MVCSNNNANA NDEHSNDSTG EHDANRSSSG
DGGKGSLSSG NDEEIGDGLA SHHAAPQFIM SPAENKMFHA AAFNFPNIDP SALLGLNTQL
QQSGDLAVSP QAITSASGIC GLNLSTFAAN GSSSGGSNGG LSMTALLPQQ QQQQQQQHQM
SQQQQQQQQQ QQQQGNSSSG QQQQPNGILA CSTPKANTPT TTQQQMYAAV MAAAASASAS
TSGSANSSLN NSNSTLNTSG GLNNSASGGD DFRCNPCNKN LSSLTRLKRH IQNVHMRPTK
EPVCNICKRV YSSLNSLRNH KSIYHRNLKQ PKQEPGVGAT QAAANSFYHQ QHQQQQLNHH
SSS


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