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C-C motif chemokine 19 (Beta-chemokine exodus-3) (CK beta-11) (Epstein-Barr virus-induced molecule 1 ligand chemokine) (EBI1 ligand chemokine) (ELC) (Macrophage inflammatory protein 3 beta) (MIP-3-beta) (Small-inducible cytokine A19)

 CCL19_HUMAN             Reviewed;          98 AA.
Q99731; O00697; O00736;
01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
01-MAY-1997, sequence version 1.
25-OCT-2017, entry version 151.
RecName: Full=C-C motif chemokine 19;
AltName: Full=Beta-chemokine exodus-3;
AltName: Full=CK beta-11;
AltName: Full=Epstein-Barr virus-induced molecule 1 ligand chemokine;
Short=EBI1 ligand chemokine;
Short=ELC;
AltName: Full=Macrophage inflammatory protein 3 beta;
Short=MIP-3-beta;
AltName: Full=Small-inducible cytokine A19;
Flags: Precursor;
Name=CCL19; Synonyms=ELC, MIP3B, SCYA19;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=9013939;
Rossi D.L., Vicari A.P., Franz-Bacon K., McClanahan T.K., Zlotnik A.;
"Identification through bioinformatics of two new macrophage
proinflammatory human chemokines: MIP-3alpha and MIP-3beta.";
J. Immunol. 158:1033-1036(1997).
[2]
NUCLEOTIDE SEQUENCE [MRNA], AND PARTIAL PROTEIN SEQUENCE.
TISSUE=Fetal lung;
PubMed=9153236; DOI=10.1074/jbc.272.21.13803;
Yoshida R., Imai T., Hieshima K., Kusuda J., Baba M., Kitaura M.,
Nishimura M., Kakizaki M., Nomiyama H., Yoshie O.;
"Molecular cloning of a novel human CC chemokine EBI1-ligand chemokine
that is a specific functional ligand for EBI1, CCR7.";
J. Biol. Chem. 272:13803-13809(1997).
[3]
NUCLEOTIDE SEQUENCE [MRNA].
Hromas R.A., Gray P., Klemsz M., Fife K., Broxmeyer H.;
"DCCL chemokines represent a novel beta chemokine subfamily.";
Submitted (JUN-1998) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Reiterer P., Bernhardt G., Lipp M.;
Submitted (JAN-1998) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Pancreas, and Spleen;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
FUNCTION.
PubMed=9498785;
Kim C.H., Pelus L.M., White J.R., Applebaum E., Johanson K.,
Broxmeyer H.E.;
"CK beta-11/macrophage inflammatory protein-3 beta/EBI1-ligand
chemokine is an efficacious chemoattractant for T and B cells.";
J. Immunol. 160:2418-2424(1998).
[7]
RECEPTOR INTERACTION.
PubMed=23341447; DOI=10.1074/jbc.M112.406108;
Watts A.O., Verkaar F., van der Lee M.M., Timmerman C.A., Kuijer M.,
van Offenbeek J., van Lith L.H., Smit M.J., Leurs R., Zaman G.J.,
Vischer H.F.;
"Beta-arrestin recruitment and G protein signaling by the atypical
human chemokine decoy receptor CCX-CKR.";
J. Biol. Chem. 288:7169-7181(2013).
-!- FUNCTION: May play a role not only in inflammatory and
immunological responses but also in normal lymphocyte
recirculation and homing. May play an important role in
trafficking of T-cells in thymus, and T-cell and B-cell migration
to secondary lymphoid organs. Binds to chemokine receptor CCR7.
Recombinant CCL19 shows potent chemotactic activity for T-cells
and B-cells but not for granulocytes and monocytes. Binds to
atypical chemokine receptor ACKR4 and mediates the recruitment of
beta-arrestin (ARRB1/2) to ACKR4. {ECO:0000269|PubMed:9498785}.
-!- INTERACTION:
P98066:TNFAIP6; NbExp=2; IntAct=EBI-11711510, EBI-11700693;
-!- SUBCELLULAR LOCATION: Secreted.
-!- TISSUE SPECIFICITY: Expressed at high levels in the lymph nodes,
thymus and appendix. Intermediate levels seen in colon and
trachea, while low levels found in spleen, small intestine, lung,
kidney and stomach.
-!- SIMILARITY: Belongs to the intercrine beta (chemokine CC) family.
{ECO:0000305}.
-!- WEB RESOURCE: Name=Wikipedia; Note=CCL19 entry;
URL="https://en.wikipedia.org/wiki/CCL19";
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution-NoDerivs License
-----------------------------------------------------------------------
EMBL; U77180; AAC50944.1; -; mRNA.
EMBL; AB000887; BAA20383.1; -; mRNA.
EMBL; U88321; AAC23905.1; -; mRNA.
EMBL; AJ223410; CAA11307.1; -; Genomic_DNA.
EMBL; BC027968; AAH27968.1; -; mRNA.
CCDS; CCDS6570.1; -.
RefSeq; NP_006265.1; NM_006274.2.
UniGene; Hs.50002; -.
PDB; 2MP1; NMR; -; A=22-98.
PDBsum; 2MP1; -.
ProteinModelPortal; Q99731; -.
SMR; Q99731; -.
BioGrid; 112266; 2.
DIP; DIP-5857N; -.
IntAct; Q99731; 2.
MINT; MINT-123917; -.
STRING; 9606.ENSP00000308815; -.
PhosphoSitePlus; Q99731; -.
BioMuta; CCL19; -.
DMDM; 2842763; -.
PaxDb; Q99731; -.
PeptideAtlas; Q99731; -.
PRIDE; Q99731; -.
DNASU; 6363; -.
Ensembl; ENST00000311925; ENSP00000308815; ENSG00000172724.
GeneID; 6363; -.
KEGG; hsa:6363; -.
UCSC; uc003zvn.4; human.
CTD; 6363; -.
DisGeNET; 6363; -.
EuPathDB; HostDB:ENSG00000172724.11; -.
GeneCards; CCL19; -.
HGNC; HGNC:10617; CCL19.
HPA; HPA067758; -.
MIM; 602227; gene.
neXtProt; NX_Q99731; -.
OpenTargets; ENSG00000172724; -.
PharmGKB; PA35550; -.
eggNOG; ENOG410J4UG; Eukaryota.
eggNOG; ENOG410ZG6G; LUCA.
GeneTree; ENSGT00730000111353; -.
HOGENOM; HOG000036685; -.
HOVERGEN; HBG017871; -.
InParanoid; Q99731; -.
KO; K05512; -.
PhylomeDB; Q99731; -.
TreeFam; TF334888; -.
Reactome; R-HSA-380108; Chemokine receptors bind chemokines.
Reactome; R-HSA-418594; G alpha (i) signalling events.
Reactome; R-HSA-6783783; Interleukin-10 signaling.
GeneWiki; CCL19; -.
GenomeRNAi; 6363; -.
PRO; PR:Q99731; -.
Proteomes; UP000005640; Chromosome 9.
Bgee; ENSG00000172724; -.
CleanEx; HS_CCL19; -.
ExpressionAtlas; Q99731; baseline and differential.
Genevisible; Q99731; HS.
GO; GO:0005576; C:extracellular region; TAS:Reactome.
GO; GO:0005615; C:extracellular space; IBA:GO_Central.
GO; GO:0005622; C:intracellular; IEA:GOC.
GO; GO:0048020; F:CCR chemokine receptor binding; IPI:UniProtKB.
GO; GO:0031735; F:CCR10 chemokine receptor binding; IDA:BHF-UCL.
GO; GO:0031732; F:CCR7 chemokine receptor binding; ISS:BHF-UCL.
GO; GO:0008009; F:chemokine activity; IDA:BHF-UCL.
GO; GO:0042379; F:chemokine receptor binding; IDA:UniProtKB.
GO; GO:0007257; P:activation of JUN kinase activity; ISS:BHF-UCL.
GO; GO:0061844; P:antimicrobial humoral immune response mediated by antimicrobial peptide; IDA:UniProtKB.
GO; GO:0007154; P:cell communication; TAS:ProtInc.
GO; GO:0048469; P:cell maturation; ISS:BHF-UCL.
GO; GO:0006874; P:cellular calcium ion homeostasis; TAS:ProtInc.
GO; GO:0071346; P:cellular response to interferon-gamma; IBA:GO_Central.
GO; GO:0071347; P:cellular response to interleukin-1; IBA:GO_Central.
GO; GO:0071356; P:cellular response to tumor necrosis factor; IBA:GO_Central.
GO; GO:0098586; P:cellular response to virus; IMP:UniProtKB.
GO; GO:0070098; P:chemokine-mediated signaling pathway; IBA:GO_Central.
GO; GO:0002407; P:dendritic cell chemotaxis; IDA:BHF-UCL.
GO; GO:0001768; P:establishment of T cell polarity; IDA:BHF-UCL.
GO; GO:0007186; P:G-protein coupled receptor signaling pathway; IBA:GO_Central.
GO; GO:0006955; P:immune response; TAS:ProtInc.
GO; GO:0001771; P:immunological synapse formation; ISS:BHF-UCL.
GO; GO:0006954; P:inflammatory response; IBA:GO_Central.
GO; GO:0072610; P:interleukin-12 secretion; ISS:BHF-UCL.
GO; GO:0031640; P:killing of cells of other organism; IDA:UniProtKB.
GO; GO:0048247; P:lymphocyte chemotaxis; IBA:GO_Central.
GO; GO:0097029; P:mature conventional dendritic cell differentiation; ISS:BHF-UCL.
GO; GO:0002548; P:monocyte chemotaxis; IBA:GO_Central.
GO; GO:0002408; P:myeloid dendritic cell chemotaxis; IDA:BHF-UCL.
GO; GO:2000107; P:negative regulation of leukocyte apoptotic process; IDA:BHF-UCL.
GO; GO:2000147; P:positive regulation of cell motility; IDA:BHF-UCL.
GO; GO:0050921; P:positive regulation of chemotaxis; ISS:BHF-UCL.
GO; GO:0002606; P:positive regulation of dendritic cell antigen processing and presentation; ISS:BHF-UCL.
GO; GO:2000549; P:positive regulation of dendritic cell dendrite assembly; ISS:BHF-UCL.
GO; GO:0045807; P:positive regulation of endocytosis; ISS:BHF-UCL.
GO; GO:0070374; P:positive regulation of ERK1 and ERK2 cascade; IDA:BHF-UCL.
GO; GO:0010560; P:positive regulation of glycoprotein biosynthetic process; ISS:BHF-UCL.
GO; GO:0043547; P:positive regulation of GTPase activity; ISS:BHF-UCL.
GO; GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB signaling; IDA:BHF-UCL.
GO; GO:0050718; P:positive regulation of interleukin-1 beta secretion; ISS:BHF-UCL.
GO; GO:0032735; P:positive regulation of interleukin-12 production; ISS:BHF-UCL.
GO; GO:0046330; P:positive regulation of JNK cascade; IDA:BHF-UCL.
GO; GO:0090023; P:positive regulation of neutrophil chemotaxis; IDA:BHF-UCL.
GO; GO:0042346; P:positive regulation of NF-kappaB import into nucleus; IDA:BHF-UCL.
GO; GO:0043552; P:positive regulation of phosphatidylinositol 3-kinase activity; IDA:BHF-UCL.
GO; GO:0045860; P:positive regulation of protein kinase activity; IDA:BHF-UCL.
GO; GO:0051897; P:positive regulation of protein kinase B signaling; IDA:BHF-UCL.
GO; GO:0048260; P:positive regulation of receptor-mediated endocytosis; ISS:BHF-UCL.
GO; GO:0042102; P:positive regulation of T cell proliferation; ISS:BHF-UCL.
GO; GO:0045627; P:positive regulation of T-helper 1 cell differentiation; ISS:BHF-UCL.
GO; GO:0032760; P:positive regulation of tumor necrosis factor production; ISS:BHF-UCL.
GO; GO:0060491; P:regulation of cell projection assembly; ISS:BHF-UCL.
GO; GO:0051209; P:release of sequestered calcium ion into cytosol; IDA:BHF-UCL.
GO; GO:0071731; P:response to nitric oxide; IDA:BHF-UCL.
GO; GO:0034695; P:response to prostaglandin E; IDA:BHF-UCL.
GO; GO:0009615; P:response to virus; TAS:ProtInc.
GO; GO:0031295; P:T cell costimulation; ISS:BHF-UCL.
CDD; cd01119; Chemokine_CC_DCCL; 1.
InterPro; IPR000827; Chemokine_CC_CS.
InterPro; IPR034133; Chemokine_CC_DCCL.
InterPro; IPR001811; Chemokine_IL8-like_dom.
InterPro; IPR036048; Interleukin_8-like_sf.
Pfam; PF00048; IL8; 1.
SMART; SM00199; SCY; 1.
SUPFAM; SSF54117; SSF54117; 1.
PROSITE; PS00472; SMALL_CYTOKINES_CC; 1.
1: Evidence at protein level;
3D-structure; Chemotaxis; Complete proteome; Cytokine;
Direct protein sequencing; Disulfide bond; Inflammatory response;
Reference proteome; Secreted; Signal.
SIGNAL 1 21
CHAIN 22 98 C-C motif chemokine 19.
/FTId=PRO_0000005214.
DISULFID 29 55 {ECO:0000250}.
DISULFID 30 71 {ECO:0000250}.
STRAND 26 29 {ECO:0000244|PDB:2MP1}.
STRAND 42 49 {ECO:0000244|PDB:2MP1}.
TURN 51 53 {ECO:0000244|PDB:2MP1}.
STRAND 59 64 {ECO:0000244|PDB:2MP1}.
STRAND 69 72 {ECO:0000244|PDB:2MP1}.
STRAND 74 76 {ECO:0000244|PDB:2MP1}.
HELIX 77 90 {ECO:0000244|PDB:2MP1}.
SEQUENCE 98 AA; 10993 MW; 0D2516DB2EB1C81B CRC64;
MALLLALSLL VLWTSPAPTL SGTNDAEDCC LSVTQKPIPG YIVRNFHYLL IKDGCRVPAV
VFTTLRGRQL CAPPDQPWVE RIIQRLQRTS AKMKRRSS


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