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C-X-C motif chemokine 6 (Chemokine alpha 3) (CKA-3) (Granulocyte chemotactic protein 2) (GCP-2) (Small-inducible cytokine B6) [Cleaved into: Small-inducible cytokine B6, N-processed variant 1; Small-inducible cytokine B6, N-processed variant 2; Small-inducible cytokine B6, N-processed variant 3]

 CXCL6_HUMAN             Reviewed;         114 AA.
P80162; B2R4X3; Q4W5D4;
01-APR-1993, integrated into UniProtKB/Swiss-Prot.
15-JUL-1998, sequence version 4.
28-FEB-2018, entry version 160.
RecName: Full=C-X-C motif chemokine 6;
AltName: Full=Chemokine alpha 3;
Short=CKA-3;
AltName: Full=Granulocyte chemotactic protein 2;
Short=GCP-2;
AltName: Full=Small-inducible cytokine B6;
Contains:
RecName: Full=Small-inducible cytokine B6, N-processed variant 1;
Contains:
RecName: Full=Small-inducible cytokine B6, N-processed variant 2;
Contains:
RecName: Full=Small-inducible cytokine B6, N-processed variant 3;
Flags: Precursor;
Name=CXCL6; Synonyms=GCP2, SCYB6;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=9164944;
Rovai L.E., Herschman H.R., Smith J.B.;
"Cloning and characterization of the human granulocyte chemotactic
protein-2 gene.";
J. Immunol. 158:5257-5266(1997).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
Ni J., Su J., Li H.;
"Cloning, sequencing and biological characterization of a C-X-C
chemokine, CKA-3.";
Submitted (DEC-1996) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Spleen;
PubMed=14702039; DOI=10.1038/ng1285;
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human
cDNAs.";
Nat. Genet. 36:40-45(2004).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=15815621; DOI=10.1038/nature03466;
Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H.,
Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M.,
Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E.,
Kremitzki C., Oddy L., Du H., Sun H., Bradshaw-Cordum H., Ali J.,
Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C.,
Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J.,
Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A.,
Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K.,
Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M.,
Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K.,
McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C.,
Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N.,
Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M.,
Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E.,
Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P.,
Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A.,
Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A.,
Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T.,
Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D.,
Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X.,
McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C.,
Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S.,
Miller W., Eichler E.E., Bork P., Suyama M., Torrents D.,
Waterston R.H., Wilson R.K.;
"Generation and annotation of the DNA sequences of human chromosomes 2
and 4.";
Nature 434:724-731(2005).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Liver;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
NUCLEOTIDE SEQUENCE [MRNA] OF 38-114, AND FUNCTION.
PubMed=9057843; DOI=10.1111/j.1432-1033.1997.00762.x;
Froyen G., Proost P., Ronsse I., Mitera T., Haelens A., Wuyts A.,
Opdenakker G., van Damme J., Billiau A.;
"Cloning, bacterial expression and biological characterization of
recombinant human granulocyte chemotactic protein-2 and differential
expression of granulocyte chemotactic protein-2 and epithelial cell-
derived neutrophil activating peptide-78 mRNAs.";
Eur. J. Biochem. 243:762-769(1997).
[7]
PROTEIN SEQUENCE OF 38-112, FUNCTION, AND PROTEOLYTIC PROCESSING OF
N-TERMINAL.
TISSUE=Osteosarcoma;
PubMed=8399143; DOI=10.1021/bi00089a037;
Proost P., Wuyts A., Conings R., Lenaerts J.-P., Billiau A.,
Opdenakker G., van Damme J.;
"Human and bovine granulocyte chemotactic protein-2: complete amino
acid sequence and functional characterization as chemokines.";
Biochemistry 32:10170-10177(1993).
[8]
PROTEIN SEQUENCE OF 38-57, AND FUNCTION.
TISSUE=Osteosarcoma;
PubMed=8423327;
Proost P., de Wolf-Peeters C., Conings R., Opdenakker G., Billiau A.,
van Damme J.;
"Identification of a novel granulocyte chemotactic protein (GCP-2)
from human tumor cells. In vitro and in vivo comparison with natural
forms of GRO, IP-10, and IL-8.";
J. Immunol. 150:1000-1010(1993).
[9]
FUNCTION.
PubMed=18443119; DOI=10.1128/AAC.00028-08;
Linge H.M., Collin M., Nordenfelt P., Morgelin M., Malmsten M.,
Egesten A.;
"The human CXC chemokine granulocyte chemotactic protein 2 (GCP-
2)/CXCL6 possesses membrane-disrupting properties and is
antibacterial.";
Antimicrob. Agents Chemother. 52:2599-2607(2008).
-!- FUNCTION: Chemotactic for neutrophil granulocytes. Signals through
binding and activation of its receptors (CXCR1 and CXCR2). In
addition to its chemotactic and angiogenic properties, it has
strong antibacterial activity against Gram-positive and Gram-
negative bacteria (90-fold-higher when compared to CXCL5 and
CXCL7). {ECO:0000269|PubMed:18443119, ECO:0000269|PubMed:8399143,
ECO:0000269|PubMed:8423327, ECO:0000269|PubMed:9057843}.
-!- SUBCELLULAR LOCATION: Secreted.
-!- SIMILARITY: Belongs to the intercrine alpha (chemokine CxC)
family. {ECO:0000305}.
-!- WEB RESOURCE: Name=Wikipedia; Note=CXCL6 entry;
URL="https://en.wikipedia.org/wiki/CXCL6";
-----------------------------------------------------------------------
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
Distributed under the Creative Commons Attribution-NoDerivs License
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EMBL; U83303; AAC51338.1; -; Genomic_DNA.
EMBL; U81234; AAD00506.1; -; mRNA.
EMBL; AK311981; BAG34920.1; -; mRNA.
EMBL; AC108029; AAY40939.1; -; Genomic_DNA.
EMBL; BC013744; AAH13744.1; -; mRNA.
EMBL; Y08770; CAA70023.1; -; mRNA.
CCDS; CCDS3560.1; -.
PIR; A54188; A54188.
RefSeq; NP_002984.1; NM_002993.3.
UniGene; Hs.164021; -.
ProteinModelPortal; P80162; -.
SMR; P80162; -.
BioGrid; 112274; 1.
IntAct; P80162; 1.
MINT; P80162; -.
STRING; 9606.ENSP00000226317; -.
iPTMnet; P80162; -.
PhosphoSitePlus; P80162; -.
BioMuta; CXCL6; -.
DMDM; 2851486; -.
MaxQB; P80162; -.
PaxDb; P80162; -.
PeptideAtlas; P80162; -.
PRIDE; P80162; -.
DNASU; 6372; -.
Ensembl; ENST00000226317; ENSP00000226317; ENSG00000124875.
GeneID; 6372; -.
KEGG; hsa:6372; -.
UCSC; uc003hhf.4; human.
CTD; 6372; -.
DisGeNET; 6372; -.
EuPathDB; HostDB:ENSG00000124875.9; -.
GeneCards; CXCL6; -.
HGNC; HGNC:10643; CXCL6.
MIM; 138965; gene.
neXtProt; NX_P80162; -.
OpenTargets; ENSG00000124875; -.
PharmGKB; PA35574; -.
eggNOG; ENOG410J4TR; Eukaryota.
eggNOG; ENOG41117DC; LUCA.
GeneTree; ENSGT00530000062901; -.
HOGENOM; HOG000220915; -.
HOVERGEN; HBG107789; -.
InParanoid; P80162; -.
KO; K05506; -.
OMA; TELRCTC; -.
OrthoDB; EOG091G132U; -.
PhylomeDB; P80162; -.
TreeFam; TF333433; -.
Reactome; R-HSA-380108; Chemokine receptors bind chemokines.
Reactome; R-HSA-418594; G alpha (i) signalling events.
GenomeRNAi; 6372; -.
PMAP-CutDB; P80162; -.
PRO; PR:P80162; -.
Proteomes; UP000005640; Chromosome 4.
Bgee; ENSG00000124875; -.
CleanEx; HS_CXCL6; -.
ExpressionAtlas; P80162; baseline and differential.
Genevisible; P80162; HS.
GO; GO:0005576; C:extracellular region; TAS:Reactome.
GO; GO:0005615; C:extracellular space; IBA:GO_Central.
GO; GO:0008009; F:chemokine activity; IDA:UniProtKB.
GO; GO:0045236; F:CXCR chemokine receptor binding; IBA:GO_Central.
GO; GO:0008201; F:heparin binding; IEA:UniProtKB-KW.
GO; GO:0061844; P:antimicrobial humoral immune response mediated by antimicrobial peptide; IDA:UniProtKB.
GO; GO:0007267; P:cell-cell signaling; TAS:ProtInc.
GO; GO:0071222; P:cellular response to lipopolysaccharide; IDA:UniProtKB.
GO; GO:0070098; P:chemokine-mediated signaling pathway; IBA:GO_Central.
GO; GO:0006935; P:chemotaxis; TAS:ProtInc.
GO; GO:0042742; P:defense response to bacterium; IEA:UniProtKB-KW.
GO; GO:0007186; P:G-protein coupled receptor signaling pathway; IBA:GO_Central.
GO; GO:0006954; P:inflammatory response; IBA:GO_Central.
GO; GO:0042119; P:neutrophil activation; IDA:UniProtKB.
GO; GO:0030593; P:neutrophil chemotaxis; IDA:UniProtKB.
GO; GO:0002446; P:neutrophil mediated immunity; IBA:GO_Central.
GO; GO:0090023; P:positive regulation of neutrophil chemotaxis; IBA:GO_Central.
GO; GO:0042127; P:regulation of cell proliferation; IBA:GO_Central.
GO; GO:0007165; P:signal transduction; TAS:ProtInc.
CDD; cd00273; Chemokine_CXC; 1.
InterPro; IPR001089; Chemokine_CXC.
InterPro; IPR018048; Chemokine_CXC_CS.
InterPro; IPR001811; Chemokine_IL8-like_dom.
InterPro; IPR033899; CXC_Chemokine_domain.
InterPro; IPR036048; Interleukin_8-like_sf.
PANTHER; PTHR10179; PTHR10179; 1.
Pfam; PF00048; IL8; 1.
PRINTS; PR00437; SMALLCYTKCXC.
SMART; SM00199; SCY; 1.
SUPFAM; SSF54117; SSF54117; 1.
PROSITE; PS00471; SMALL_CYTOKINES_CXC; 1.
1: Evidence at protein level;
Antibiotic; Antimicrobial; Chemotaxis; Complete proteome; Cytokine;
Direct protein sequencing; Disulfide bond; Heparin-binding;
Reference proteome; Secreted; Signal.
SIGNAL 1 37 {ECO:0000269|PubMed:8399143,
ECO:0000269|PubMed:8423327}.
CHAIN 38 114 C-X-C motif chemokine 6.
/FTId=PRO_0000005084.
CHAIN 40 114 Small-inducible cytokine B6, N-processed
variant 1.
/FTId=PRO_0000005085.
CHAIN 43 114 Small-inducible cytokine B6, N-processed
variant 2.
/FTId=PRO_0000005086.
CHAIN 46 114 Small-inducible cytokine B6, N-processed
variant 3.
/FTId=PRO_0000005087.
DISULFID 49 75 {ECO:0000250}.
DISULFID 51 91 {ECO:0000250}.
SEQUENCE 114 AA; 11897 MW; 5A58B38C17F25178 CRC64;
MSLPSSRAAR VPGPSGSLCA LLALLLLLTP PGPLASAGPV SAVLTELRCT CLRVTLRVNP
KTIGKLQVFP AGPQCSKVEV VASLKNGKQV CLDPEAPFLK KVIQKILDSG NKKN


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