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C4-dicarboxylate transport transcriptional regulatory protein DctD (Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD)

 A0A1H8QMS6_9RHIZ        Unreviewed;       454 AA.
A0A1H8QMS6;
18-JAN-2017, integrated into UniProtKB/TrEMBL.
18-JAN-2017, sequence version 1.
22-NOV-2017, entry version 8.
SubName: Full=C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:SEI04110.1};
SubName: Full=Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD {ECO:0000313|EMBL:SEO55288.1};
Name=dctD_2 {ECO:0000313|EMBL:SEI04110.1};
ORFNames=RTCCBAU85039_3918 {ECO:0000313|EMBL:SEI04110.1},
SAMN05216228_101991 {ECO:0000313|EMBL:SEO55288.1};
Rhizobium tibeticum.
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
NCBI_TaxID=501024 {ECO:0000313|EMBL:SEO55288.1};
[1] {ECO:0000313|EMBL:SEO55288.1, ECO:0000313|Proteomes:UP000183063}
NUCLEOTIDE SEQUENCE.
STRAIN=CCBAU85039 {ECO:0000313|EMBL:SEI04110.1}, and
CGMCC 1.7071 {ECO:0000313|EMBL:SEO55288.1};
de Groot N.N.;
Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
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EMBL; FNXB01000021; SEI04110.1; -; Genomic_DNA.
EMBL; FOCV01000019; SEO55288.1; -; Genomic_DNA.
RefSeq; WP_072377879.1; NZ_FOCV01000019.1.
Proteomes; UP000183063; Unassembled WGS sequence.
GO; GO:0005622; C:intracellular; IEA:GOC.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO; GO:0008134; F:transcription factor binding; IEA:InterPro.
GO; GO:0000160; P:phosphorelay signal transduction system; IEA:InterPro.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
CDD; cd00156; REC; 1.
InterPro; IPR003593; AAA+_ATPase.
InterPro; IPR011006; CheY-like_superfamily.
InterPro; IPR009057; Homeobox-like_sf.
InterPro; IPR002197; HTH_Fis.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
InterPro; IPR002078; Sigma_54_int.
InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
InterPro; IPR025944; Sigma_54_int_dom_CS.
Pfam; PF02954; HTH_8; 1.
Pfam; PF00072; Response_reg; 1.
Pfam; PF00158; Sigma54_activat; 1.
SMART; SM00382; AAA; 1.
SMART; SM00448; REC; 1.
SUPFAM; SSF46689; SSF46689; 1.
SUPFAM; SSF52172; SSF52172; 1.
SUPFAM; SSF52540; SSF52540; 1.
PROSITE; PS50110; RESPONSE_REGULATORY; 1.
PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
4: Predicted;
ATP-binding {ECO:0000256|PROSITE-ProRule:PRU00193,
ECO:0000256|SAAS:SAAS00110192};
Complete proteome {ECO:0000313|Proteomes:UP000183063};
DNA-binding {ECO:0000256|SAAS:SAAS00009904};
Nucleotide-binding {ECO:0000256|PROSITE-ProRule:PRU00193,
ECO:0000256|SAAS:SAAS00110192};
Reference proteome {ECO:0000313|Proteomes:UP000183063};
Transcription {ECO:0000256|PROSITE-ProRule:PRU00193,
ECO:0000256|SAAS:SAAS00814754};
Transcription regulation {ECO:0000256|PROSITE-ProRule:PRU00193,
ECO:0000256|SAAS:SAAS00814754}.
DOMAIN 6 120 Response regulatory.
{ECO:0000259|PROSITE:PS50110}.
DOMAIN 145 374 Sigma-54 factor interaction.
{ECO:0000259|PROSITE:PS50045}.
NP_BIND 173 180 ATP. {ECO:0000256|PROSITE-
ProRule:PRU00193}.
NP_BIND 236 245 ATP. {ECO:0000256|PROSITE-
ProRule:PRU00193}.
MOD_RES 55 55 4-aspartylphosphate.
{ECO:0000256|PROSITE-ProRule:PRU00169}.
SEQUENCE 454 AA; 50788 MW; 46F2CCC55DCF73F8 CRC64;
MSDVTPIFLV DDDRDLLRAT KQTLELAGFS VSAFSDAGEA LAALNPDFAG VLVSDIRMPQ
IDGLQLFDRV RQHDEDLPVI LVTGHGDIPM AVKAMQDGVY DFITKPFATD RLIQSVRRAA
EKRRLVMENR SLRKATEQAR DDLPLIGQTP AMERLRHTLR QIADTDVDVL LMGETGSGKE
VVASLLHRWS RRASGNFVAL NCGALPESVV ESELFGHEPG AFTGAQKKRI GRIEHASGGT
LFLDEIESMP PATQVQMLRV LEMREVTPLG TNEVRPVDLR VVAASKIDLG DPRQRGDFRE
DLYYRLNVVT ISIPPLKERR DDIPLLFGYF AERAASRFKR DVPTIPSSIH RHLREHDWPG
NVRELSHFAE RFVLGVGHVF DRIPAAAPGA DEALSLPDRL ERYEAHIIRE ALNANDGDVR
RTIADLGIPR KTFYDKLQRH GIVRSDFASS SERS


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