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CD2 antigen cytoplasmic tail-binding protein 2 (CD2 cytoplasmic domain-binding protein 2) (CD2 tail-binding protein 2)

 CD2B2_MOUSE             Reviewed;         342 AA.
Q9CWK3; Q3TJX5;
30-MAY-2003, integrated into UniProtKB/Swiss-Prot.
01-JUN-2001, sequence version 1.
30-AUG-2017, entry version 116.
RecName: Full=CD2 antigen cytoplasmic tail-binding protein 2;
Short=CD2 cytoplasmic domain-binding protein 2;
Short=CD2 tail-binding protein 2;
Name=Cd2bp2;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J; TISSUE=Embryo, Pituitary, and Testis;
PubMed=16141072; DOI=10.1126/science.1112014;
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M.,
Davis M.J., Wilming L.G., Aidinis V., Allen J.E.,
Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L.,
Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M.,
Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R.,
Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G.,
di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G.,
Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M.,
Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N.,
Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T.,
Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H.,
Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K.,
Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J.,
Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L.,
Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K.,
Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P.,
Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O.,
Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G.,
Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M.,
Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B.,
Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K.,
Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A.,
Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K.,
Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C.,
Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J.,
Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y.,
Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T.,
Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N.,
Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N.,
Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S.,
Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J.,
Hayashizaki Y.;
"The transcriptional landscape of the mammalian genome.";
Science 309:1559-1563(2005).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Brain;
PubMed=16452087; DOI=10.1074/mcp.T500041-MCP200;
Trinidad J.C., Specht C.G., Thalhammer A., Schoepfer R.,
Burlingame A.L.;
"Comprehensive identification of phosphorylation sites in postsynaptic
density preparations.";
Mol. Cell. Proteomics 5:914-922(2006).
[4]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-49, AND IDENTIFICATION
BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Kidney, Spleen, and Testis;
PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
"A tissue-specific atlas of mouse protein phosphorylation and
expression.";
Cell 143:1174-1189(2010).
[5]
ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-44, AND IDENTIFICATION BY
MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Embryonic fibroblast;
PubMed=23806337; DOI=10.1016/j.molcel.2013.06.001;
Park J., Chen Y., Tishkoff D.X., Peng C., Tan M., Dai L., Xie Z.,
Zhang Y., Zwaans B.M., Skinner M.E., Lombard D.B., Zhao Y.;
"SIRT5-mediated lysine desuccinylation impacts diverse metabolic
pathways.";
Mol. Cell 50:919-930(2013).
-!- FUNCTION: Involved in pre-mRNA splicing as component of the U5
snRNP complex that is involved in spliceosome assembly.
{ECO:0000250}.
-!- SUBUNIT: Component of the U5 snRNP complex composed of the U5
snRNA and at least PRPF6, PRPF8, SNRNP200, EFTUD2, SNRNP40, DDX23,
TXNL4A and CD2BP2. Interacts directly with TXNL4A and PRPF6.
Interacts (via GYF domain) with CD2 (via Pro-rich sequence in the
cytoplasmic domain). Interacts with PQBP1 (By similarity).
{ECO:0000250}.
-!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}. Nucleus
{ECO:0000250}. Note=Predominantly nuclear. {ECO:0000250}.
-----------------------------------------------------------------------
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EMBL; BC006920; AAH06920.1; -; mRNA.
EMBL; AK010582; BAB27044.1; -; mRNA.
EMBL; AK030393; BAC26940.1; -; mRNA.
EMBL; AK031694; BAC27518.1; -; mRNA.
EMBL; AK034689; BAC28798.1; -; mRNA.
EMBL; AK167249; BAE39370.1; -; mRNA.
CCDS; CCDS21859.1; -.
RefSeq; NP_001272834.1; NM_001285905.1.
RefSeq; NP_001272835.1; NM_001285906.1.
RefSeq; NP_001272836.1; NM_001285907.1.
RefSeq; NP_081629.1; NM_027353.4.
RefSeq; XP_006508260.1; XM_006508197.2.
RefSeq; XP_006508261.1; XM_006508198.3.
UniGene; Mm.28050; -.
ProteinModelPortal; Q9CWK3; -.
SMR; Q9CWK3; -.
BioGrid; 213930; 1.
IntAct; Q9CWK3; 1.
MINT; MINT-4090161; -.
STRING; 10090.ENSMUSP00000044790; -.
iPTMnet; Q9CWK3; -.
PhosphoSitePlus; Q9CWK3; -.
EPD; Q9CWK3; -.
MaxQB; Q9CWK3; -.
PaxDb; Q9CWK3; -.
PRIDE; Q9CWK3; -.
Ensembl; ENSMUST00000035771; ENSMUSP00000044790; ENSMUSG00000042502.
Ensembl; ENSMUST00000166791; ENSMUSP00000132963; ENSMUSG00000042502.
Ensembl; ENSMUST00000205316; ENSMUSP00000145888; ENSMUSG00000042502.
Ensembl; ENSMUST00000206026; ENSMUSP00000146167; ENSMUSG00000042502.
GeneID; 70233; -.
KEGG; mmu:70233; -.
UCSC; uc009juj.2; mouse.
CTD; 10421; -.
MGI; MGI:1917483; Cd2bp2.
eggNOG; KOG2950; Eukaryota.
eggNOG; ENOG4111KF5; LUCA.
GeneTree; ENSGT00390000012483; -.
HOVERGEN; HBG056920; -.
InParanoid; Q9CWK3; -.
KO; K13099; -.
OMA; TGNMDIY; -.
OrthoDB; EOG091G0MVR; -.
PhylomeDB; Q9CWK3; -.
TreeFam; TF313042; -.
Reactome; R-MMU-72163; mRNA Splicing - Major Pathway.
PRO; PR:Q9CWK3; -.
Proteomes; UP000000589; Chromosome 7.
Bgee; ENSMUSG00000042502; -.
CleanEx; MM_CD2BP2; -.
ExpressionAtlas; Q9CWK3; baseline and differential.
Genevisible; Q9CWK3; MM.
GO; GO:0005829; C:cytosol; ISO:MGI.
GO; GO:0001650; C:fibrillar center; ISO:MGI.
GO; GO:0016607; C:nuclear speck; ISO:MGI.
GO; GO:0005654; C:nucleoplasm; ISO:MGI.
GO; GO:0005634; C:nucleus; ISO:MGI.
GO; GO:0005682; C:U5 snRNP; ISO:MGI.
GO; GO:0043021; F:ribonucleoprotein complex binding; ISO:MGI.
GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
GO; GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
CDD; cd00072; GYF; 1.
Gene3D; 3.30.1490.40; -; 1.
InterPro; IPR003169; GYF.
InterPro; IPR035445; GYF-like_domain.
Pfam; PF02213; GYF; 1.
SMART; SM00444; GYF; 1.
SUPFAM; SSF55277; SSF55277; 1.
PROSITE; PS50829; GYF; 1.
1: Evidence at protein level;
Acetylation; Complete proteome; Cytoplasm; Isopeptide bond;
mRNA processing; mRNA splicing; Nucleus; Phosphoprotein;
Reference proteome; Ubl conjugation.
CHAIN 1 342 CD2 antigen cytoplasmic tail-binding
protein 2.
/FTId=PRO_0000089438.
DOMAIN 281 339 GYF. {ECO:0000255|PROSITE-
ProRule:PRU00101}.
MOD_RES 44 44 N6-acetyllysine.
{ECO:0000244|PubMed:23806337}.
MOD_RES 46 46 Phosphoserine.
{ECO:0000250|UniProtKB:O95400}.
MOD_RES 49 49 Phosphoserine.
{ECO:0000244|PubMed:21183079}.
MOD_RES 117 117 Phosphoserine.
{ECO:0000250|UniProtKB:O95400}.
MOD_RES 196 196 Phosphoserine.
{ECO:0000250|UniProtKB:O95400}.
CROSSLNK 26 26 Glycyl lysine isopeptide (Lys-Gly)
(interchain with G-Cter in SUMO2).
{ECO:0000250|UniProtKB:O95400}.
SEQUENCE 342 AA; 37694 MW; 6B00FBE777A19206 CRC64;
MPKRKVTFQG VGDEDGEDEI SVPKKKLVDP VAAAGGPGSR FKGKHSLDSD EEDDDEEGSS
KYDILASEDV EGQEAATLPS EGGVRITPFN LQEEMEEGHF DADGNYFLNQ DAQIRDSWLD
NIDWVRIKER PPDKHQVSDS EEEDSLGQTP MSAQALLEGL LELLLPRETV AGALRRLGAR
GGGKGSNSKG TGRPNSPQRL DRLSGLADQM VARGNLGVYQ ETRERLAMRL KGLGCRAQGS
HDPTPPPSLD MFAEEVAEGE LETPTPTQRE EAESAGDGLM DVMWEYKWEN TGDAELYGPF
TSAQMQTWVS EGYFPDGVYC RKLDPPGGQF YNSKRIDFEL YT


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