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CLE-1C protein (CoLlagen with Endostatin domain)

 G5EDQ4_CAEEL            Unreviewed;       650 AA.
G5EDQ4;
14-DEC-2011, integrated into UniProtKB/TrEMBL.
14-DEC-2011, sequence version 1.
25-OCT-2017, entry version 61.
SubName: Full=CLE-1C protein {ECO:0000313|EMBL:AAD47825.1};
SubName: Full=CoLlagen with Endostatin domain {ECO:0000313|EMBL:CAB03084.1};
Name=cle-1 {ECO:0000313|EMBL:CAB03084.1,
ECO:0000313|WormBase:C36B1.1c};
ORFNames=C36B1.1 {ECO:0000313|WormBase:C36B1.1c},
CELE_C36B1.1 {ECO:0000313|EMBL:CAB03084.1};
Caenorhabditis elegans.
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
NCBI_TaxID=6239 {ECO:0000313|EMBL:AAD47825.1};
[1] {ECO:0000313|EMBL:CAB03084.1, ECO:0000313|Proteomes:UP000001940}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Bristol N2 {ECO:0000313|EMBL:CAB03084.1,
ECO:0000313|Proteomes:UP000001940};
PubMed=9851916; DOI=https://doi.org/10.1126/science.282.5396.2012;
The C. elegans sequencing consortium;
Sulson J.E., Waterston R.;
"Genome sequence of the nematode C. elegans: a platform for
investigating biology.";
Science 282:2012-2018(1998).
[2] {ECO:0000313|EMBL:AAD47825.1}
NUCLEOTIDE SEQUENCE.
PubMed=11257122; DOI=10.1083/jcb.152.6.1219;
Ackley B.D., Crew J.R., Elamaa H., Pihlajaniemi T., Kuo C.J.,
Kramer J.M.;
"The NC1/endostatin domain of Caenorhabditis elegans type XVIII
collagen affects cell migration and axon guidance.";
J. Cell Biol. 152:1219-1232(2001).
[3] {ECO:0000313|EMBL:CAB03084.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Bristol N2 {ECO:0000313|EMBL:CAB03084.1};
Alber B.E., Fuchs G.;
Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases.
[4] {ECO:0000313|EMBL:CAB03084.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Bristol N2 {ECO:0000313|EMBL:CAB03084.1};
WormBase Consortium;
WormBase;
Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
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EMBL; AF164959; AAD47825.1; -; Genomic_DNA.
EMBL; BX284601; CAB03084.1; -; Genomic_DNA.
PIR; T22002; T22002.
RefSeq; NP_740898.1; NM_170906.5.
UniGene; Cel.16923; -.
EnsemblMetazoa; C36B1.1c; C36B1.1c; WBGene00000527.
GeneID; 172678; -.
CTD; 172678; -.
WormBase; C36B1.1c; CE17816; WBGene00000527; cle-1.
eggNOG; KOG3546; Eukaryota.
eggNOG; ENOG410XQ04; LUCA.
GeneTree; ENSGT00710000106713; -.
Reactome; R-CEL-1442490; Collagen degradation.
Reactome; R-CEL-1592389; Activation of Matrix Metalloproteinases.
Reactome; R-CEL-216083; Integrin cell surface interactions.
Reactome; R-CEL-8948216; Collagen chain trimerization.
Proteomes; UP000001940; Chromosome I.
Bgee; WBGene00000527; -.
GO; GO:0005604; C:basement membrane; IDA:WormBase.
GO; GO:0030054; C:cell junction; IDA:WormBase.
GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
GO; GO:0007411; P:axon guidance; IMP:WormBase.
GO; GO:0007155; P:cell adhesion; IEA:InterPro.
GO; GO:0040039; P:inductive cell migration; IMP:WormBase.
GO; GO:0001764; P:neuron migration; IMP:WormBase.
GO; GO:0035418; P:protein localization to synapse; IMP:WormBase.
GO; GO:0050808; P:synapse organization; IMP:WormBase.
GO; GO:0007271; P:synaptic transmission, cholinergic; IMP:WormBase.
CDD; cd00247; Endostatin-like; 1.
Gene3D; 2.160.20.50; -; 2.
Gene3D; 3.10.100.10; -; 1.
InterPro; IPR016186; C-type_lectin-like/link.
InterPro; IPR010515; Collagenase_NC10/endostatin.
InterPro; IPR016187; CTDL_fold.
InterPro; IPR016133; Insect_cyst_antifreeze_prot.
Pfam; PF06482; Endostatin; 1.
SUPFAM; SSF56436; SSF56436; 1.
1: Evidence at protein level;
Collagen {ECO:0000313|EMBL:CAB03084.1};
Complete proteome {ECO:0000313|Proteomes:UP000001940};
Proteomics identification {ECO:0000213|EPD:G5EDQ4,
ECO:0000213|PeptideAtlas:G5EDQ4};
Reference proteome {ECO:0000313|Proteomes:UP000001940};
Signal {ECO:0000256|SAM:SignalP}.
SIGNAL 1 19 {ECO:0000256|SAM:SignalP}.
CHAIN 20 650 {ECO:0000256|SAM:SignalP}.
/FTId=PRO_5011091175.
DOMAIN 363 630 Endostatin. {ECO:0000259|Pfam:PF06482}.
SEQUENCE 650 AA; 69597 MW; 6CF29ED9C16B170E CRC64;
MHLLALFIVL FLSPPAVLGG AEVFENDDFP LLSSEQEPIQ PEIREFSTSP EDSSNPGTVF
QVHVPRDDAR VRQARASSEE REFVTQSVML PVEIVEVIDD ETAFEDDGKG AEGSGTPEEF
KKTQESSELQ KISDFPPTPA PPPPYPTPQL APHDLRSYEQ QAATTPFQGA PPSNQCTQVC
RGEPGPQGPS GNDGIPGSHG APGHQGERGA DGAPGLHGSR GDQGLPGPPG MPGLAGPPGP
PGSGTGHGSG ADGPQGPPGL PGAPGRDGTS GVEGQRGPQG PPGPKGDDGV SMESLTDDDI
ERIARRVASI QKESNEPMRG DLPEYNSKVH SFTTKGEKGE RGAPGAPGAP APPAYGTLTT
GTAVNVHATT VELFASARST SVGQLAFATS SQQLFIRVTN GWKEIQLTHF HPFVETRHST
QNSRQNDASH AGRSRTGSAA APWYPKANLD EPQRDAGVHN KDRVIHMIAL SQPFSGNLHG
LRGADLQCYR EARAAGYTTT FRAMLSSNVQ DLVRIVHSVD FDTTVVNVAG HHLFPSWRSF
VNGAQMNPHA KLFSFDRHDV LNDSRWPDKR VWHGSKDGGI RAEQYCDGWR RADSSLTSLA
GHISSNTSIF QSSGSEKCEN KLVVLCVENM SKYHGDRILR LHRITSDFKK


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