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Calbindin (Calbindin D28) (D-28K) (Vitamin D-dependent calcium-binding protein, avian-type)

 CALB1_BOVIN             Reviewed;         261 AA.
P04467; Q1LZA2;
13-AUG-1987, integrated into UniProtKB/Swiss-Prot.
23-JAN-2007, sequence version 3.
25-OCT-2017, entry version 126.
RecName: Full=Calbindin;
AltName: Full=Calbindin D28;
AltName: Full=D-28K;
AltName: Full=Vitamin D-dependent calcium-binding protein, avian-type;
Name=CALB1;
Bos taurus (Bovine).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia;
Pecora; Bovidae; Bovinae; Bos.
NCBI_TaxID=9913;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=Hereford; TISSUE=Ascending colon;
NIH - Mammalian Gene Collection (MGC) project;
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
[2]
PROTEIN SEQUENCE OF 2-261, AND ACETYLATION AT ALA-2.
TISSUE=Brain;
PubMed=3754823; DOI=10.1016/0014-5793(86)80567-1;
Takagi T., Nojiri M., Konishi K., Maruyama K., Nonomura Y.;
"Amino acid sequence of vitamin D-dependent calcium-binding protein
from bovine cerebellum.";
FEBS Lett. 201:41-45(1986).
-!- FUNCTION: Buffers cytosolic calcium. May stimulate a membrane
Ca(2+)-ATPase and a 3',5'-cyclic nucleotide phosphodiesterase.
-!- SUBUNIT: Interacts with RANBP9. {ECO:0000250}.
-!- DOMAIN: This protein has four functional calcium-binding sites;
potential sites II and VI have lost affinity for calcium.
-!- SIMILARITY: Belongs to the calbindin family. {ECO:0000305}.
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EMBL; BC116125; AAI16126.1; -; mRNA.
PIR; A03071; KLBOB.
RefSeq; NP_001069663.1; NM_001076195.1.
UniGene; Bt.41062; -.
ProteinModelPortal; P04467; -.
STRING; 9913.ENSBTAP00000021174; -.
iPTMnet; P04467; -.
PaxDb; P04467; -.
PeptideAtlas; P04467; -.
PRIDE; P04467; -.
Ensembl; ENSBTAT00000021174; ENSBTAP00000021174; ENSBTAG00000015924.
GeneID; 539930; -.
KEGG; bta:539930; -.
CTD; 793; -.
eggNOG; KOG0027; Eukaryota.
eggNOG; COG5126; LUCA.
GeneTree; ENSGT00390000013118; -.
HOGENOM; HOG000231866; -.
HOVERGEN; HBG000855; -.
InParanoid; P04467; -.
KO; K14757; -.
OMA; MQTWRKY; -.
OrthoDB; EOG091G0GNH; -.
TreeFam; TF325083; -.
Proteomes; UP000009136; Chromosome 14.
Bgee; ENSBTAG00000015924; -.
GO; GO:0030424; C:axon; IEA:Ensembl.
GO; GO:0005829; C:cytosol; IBA:GO_Central.
GO; GO:0030425; C:dendrite; IEA:Ensembl.
GO; GO:0070062; C:extracellular exosome; IEA:Ensembl.
GO; GO:0043005; C:neuron projection; IBA:GO_Central.
GO; GO:0043025; C:neuronal cell body; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IBA:GO_Central.
GO; GO:0045202; C:synapse; IBA:GO_Central.
GO; GO:0005509; F:calcium ion binding; IBA:GO_Central.
GO; GO:0005499; F:vitamin D binding; IEA:UniProtKB-KW.
GO; GO:0008270; F:zinc ion binding; IEA:Ensembl.
GO; GO:0071310; P:cellular response to organic substance; IEA:Ensembl.
GO; GO:0007626; P:locomotory behavior; IEA:Ensembl.
GO; GO:0007616; P:long-term memory; IEA:Ensembl.
GO; GO:0072205; P:metanephric collecting duct development; IEA:Ensembl.
GO; GO:0072286; P:metanephric connecting tubule development; IEA:Ensembl.
GO; GO:0072221; P:metanephric distal convoluted tubule development; IEA:Ensembl.
GO; GO:0035502; P:metanephric part of ureteric bud development; IEA:Ensembl.
GO; GO:0051480; P:regulation of cytosolic calcium ion concentration; IBA:GO_Central.
GO; GO:1900271; P:regulation of long-term synaptic potentiation; IEA:Ensembl.
GO; GO:0010842; P:retina layer formation; IEA:Ensembl.
GO; GO:0007614; P:short-term memory; IEA:Ensembl.
InterPro; IPR029634; Calbindin.
InterPro; IPR011992; EF-hand-dom_pair.
InterPro; IPR018247; EF_Hand_1_Ca_BS.
InterPro; IPR002048; EF_hand_dom.
PANTHER; PTHR19972:SF3; PTHR19972:SF3; 1.
Pfam; PF13405; EF-hand_6; 1.
Pfam; PF13499; EF-hand_7; 1.
SMART; SM00054; EFh; 4.
SUPFAM; SSF47473; SSF47473; 2.
PROSITE; PS00018; EF_HAND_1; 4.
PROSITE; PS50222; EF_HAND_2; 5.
1: Evidence at protein level;
Acetylation; Calcium; Complete proteome; Direct protein sequencing;
Metal-binding; Reference proteome; Repeat; Vitamin D.
INIT_MET 1 1 Removed. {ECO:0000269|PubMed:3754823}.
CHAIN 2 261 Calbindin.
/FTId=PRO_0000073471.
DOMAIN 11 46 EF-hand 1. {ECO:0000255|PROSITE-
ProRule:PRU00448}.
DOMAIN 47 82 EF-hand 2. {ECO:0000255|PROSITE-
ProRule:PRU00448}.
DOMAIN 98 133 EF-hand 3. {ECO:0000255|PROSITE-
ProRule:PRU00448}.
DOMAIN 142 177 EF-hand 4. {ECO:0000255|PROSITE-
ProRule:PRU00448}.
DOMAIN 186 221 EF-hand 5. {ECO:0000255|PROSITE-
ProRule:PRU00448}.
DOMAIN 226 251 EF-hand 6. {ECO:0000255|PROSITE-
ProRule:PRU00448}.
CA_BIND 24 35 1.
CA_BIND 111 122 2.
CA_BIND 155 166 3.
CA_BIND 199 210 4.
REGION 2 7 Interaction with RANBP9. {ECO:0000250}.
MOD_RES 2 2 N-acetylalanine.
{ECO:0000269|PubMed:3754823}.
CONFLICT 67 67 Q -> E (in Ref. 2; AA sequence).
{ECO:0000305}.
CONFLICT 203 203 N -> D (in Ref. 2; AA sequence).
{ECO:0000305}.
SEQUENCE 261 AA; 29964 MW; 847CD14BD7431E03 CRC64;
MAESHLQSSL ITASQFFEIW LHFDADGSGY LEGKELQNLI QELQQARKKA GLELSPEMKT
FVDQYGQRDD GKIGIVELAH VLPTEENFLL LFRCQQLKSC EEFMKTWRKY DTDHSGFIET
EELKNFLKDL LEKANKTVDD TKLAEYTDLM LKLFDSNNDG KLELTEMARL LPVQENFLLK
FQGVKMCGKE FNKAFELYDQ DGNGYIDENE LDALLKDLCE KNKQDLDINN IPTYKKSIMA
LSDGGKLYRT DLALILSAGD N


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