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Caprin homolog

 CAPR1_DROME             Reviewed;         961 AA.
Q9I7D3;
05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
01-MAR-2001, sequence version 1.
23-MAY-2018, entry version 118.
RecName: Full=Caprin homolog;
Name=Capr; ORFNames=CG18811;
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley;
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G.,
Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A.,
Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X.,
Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2]
GENOME REANNOTATION.
STRAIN=Berkeley;
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D.N.J., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=Berkeley; TISSUE=Larva, and Pupae;
Stapleton M., Carlson J.W., Chavez C., Frise E., George R.A.,
Pacleb J.M., Park S., Wan K.H., Yu C., Rubin G.M., Celniker S.E.;
Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
[4]
SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS], AND IDENTIFICATION BY
MASS SPECTROMETRY.
PubMed=16979555; DOI=10.1016/j.cub.2006.07.062;
Cermelli S., Guo Y., Gross S.P., Welte M.A.;
"The lipid-droplet proteome reveals that droplets are a protein-
storage depot.";
Curr. Biol. 16:1783-1795(2006).
[5]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-356 AND SER-806, AND
IDENTIFICATION BY MASS SPECTROMETRY.
PubMed=17372656; DOI=10.1039/b617545g;
Bodenmiller B., Mueller L.N., Pedrioli P.G.A., Pflieger D.,
Juenger M.A., Eng J.K., Aebersold R., Tao W.A.;
"An integrated chemical, mass spectrometric and computational strategy
for (quantitative) phosphoproteomics: application to Drosophila
melanogaster Kc167 cells.";
Mol. Biosyst. 3:275-286(2007).
[6]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-758; THR-764; SER-765;
SER-777; THR-778; SER-791 AND SER-798, AND IDENTIFICATION BY MASS
SPECTROMETRY.
TISSUE=Embryo;
PubMed=18327897; DOI=10.1021/pr700696a;
Zhai B., Villen J., Beausoleil S.A., Mintseris J., Gygi S.P.;
"Phosphoproteome analysis of Drosophila melanogaster embryos.";
J. Proteome Res. 7:1675-1682(2008).
-!- SUBCELLULAR LOCATION: Lipid droplet {ECO:0000269|PubMed:16979555}.
-!- SIMILARITY: Belongs to the caprin family. {ECO:0000305}.
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EMBL; AE014296; AAG22572.1; -; Genomic_DNA.
EMBL; BT016057; AAV36942.1; -; mRNA.
RefSeq; NP_001287107.1; NM_001300178.1.
RefSeq; NP_652671.1; NM_144414.2.
UniGene; Dm.13182; -.
ProteinModelPortal; Q9I7D3; -.
SMR; Q9I7D3; -.
BioGrid; 72829; 7.
IntAct; Q9I7D3; 2.
MINT; Q9I7D3; -.
STRING; 7227.FBpp0074865; -.
iPTMnet; Q9I7D3; -.
PaxDb; Q9I7D3; -.
PRIDE; Q9I7D3; -.
EnsemblMetazoa; FBtr0075098; FBpp0074865; FBgn0042134.
EnsemblMetazoa; FBtr0345806; FBpp0311792; FBgn0042134.
GeneID; 59172; -.
KEGG; dme:Dmel_CG18811; -.
UCSC; CG18811-RA; d. melanogaster.
CTD; 59172; -.
FlyBase; FBgn0042134; Capr.
eggNOG; ENOG410IEA8; Eukaryota.
eggNOG; ENOG4110M5Q; LUCA.
GeneTree; ENSGT00760000119052; -.
InParanoid; Q9I7D3; -.
KO; K18743; -.
OMA; VEQNYFK; -.
OrthoDB; EOG091G0IMM; -.
PhylomeDB; Q9I7D3; -.
GenomeRNAi; 59172; -.
PRO; PR:Q9I7D3; -.
Proteomes; UP000000803; Chromosome 3L.
Bgee; FBgn0042134; -.
ExpressionAtlas; Q9I7D3; baseline and differential.
Genevisible; Q9I7D3; DM.
GO; GO:0005737; C:cytoplasm; IDA:FlyBase.
GO; GO:0005829; C:cytosol; HDA:FlyBase.
GO; GO:0005811; C:lipid droplet; IEA:UniProtKB-SubCell.
GO; GO:1990904; C:ribonucleoprotein complex; IDA:FlyBase.
GO; GO:0003723; F:RNA binding; IDA:FlyBase.
GO; GO:0007349; P:cellularization; IMP:FlyBase.
GO; GO:0045571; P:negative regulation of imaginal disc growth; IGI:FlyBase.
GO; GO:0009794; P:regulation of mitotic cell cycle, embryonic; IGI:FlyBase.
1: Evidence at protein level;
Coiled coil; Complete proteome; Lipid droplet; Phosphoprotein;
Reference proteome.
CHAIN 1 961 Caprin homolog.
/FTId=PRO_0000372862.
COILED 109 188 {ECO:0000255}.
COMPBIAS 369 687 Gln-rich.
COMPBIAS 434 640 Pro-rich.
COMPBIAS 696 699 Poly-Ser.
COMPBIAS 779 942 Gly-rich.
MOD_RES 356 356 Phosphoserine.
{ECO:0000269|PubMed:17372656}.
MOD_RES 758 758 Phosphoserine.
{ECO:0000269|PubMed:18327897}.
MOD_RES 764 764 Phosphothreonine.
{ECO:0000269|PubMed:18327897}.
MOD_RES 765 765 Phosphoserine.
{ECO:0000269|PubMed:18327897}.
MOD_RES 777 777 Phosphoserine.
{ECO:0000269|PubMed:18327897}.
MOD_RES 778 778 Phosphothreonine.
{ECO:0000269|PubMed:18327897}.
MOD_RES 791 791 Phosphoserine.
{ECO:0000269|PubMed:18327897}.
MOD_RES 798 798 Phosphoserine.
{ECO:0000269|PubMed:18327897}.
MOD_RES 806 806 Phosphoserine.
{ECO:0000269|PubMed:17372656}.
SEQUENCE 961 AA; 103590 MW; 4B6C49C630F0CED5 CRC64;
MPSAANTATV TAAIATTVAA SASNTNNNSV SKEKRSSIIS LGGSVIPGTA VAAGAGVATT
NGQSNSSAAA TADGSQTDLA SSNNNGNAAK SKANAVSAAA VVPEPYNPLK QLLVTIEHKI
RNLEKRKTKL ESYRAIQSSG KELSGDQASA VAKYDAVLAN LEFARELAKH IQQQSKEAEK
EQKKQARKDN LAKTIAETAK IREVLIIQNV LNCFNDDQVR SDFLNGENGA KKLENTELEL
LEKFFIETQT RRPETADDVS FIATAQKSAE LFYSTINARP KSFGEVSFEK LRSLFQQIQD
SGYLDKYYLV PLAENAVANS TDSGTGSGDG ESGDLLNDGS GELDAELPSE PSARNSLEEG
LDKLHLGVQA ELDQHQSYQQ QQERPSHLLE PQHQRAPSLE HQQNSMVQQV STQVYQAAPQ
AGGTTTPVHV LYAPAPPAQQ QPQQPPPHPH QLLSSPVNLQ ALQTGTAAPP AQQQQPHPTH
FAPNVRAVEQ NYFKQPPQHP QGPGIQAPQT PQQQQFMQHS RPLAEVLGTG RFHFLQDSEL
DNPEALAPPP PTNQGLVFEQ QPQQPNHVEE PTQAILTLTF TNQSFPSQQP QPQQQGPQQQ
QQLFSPVLIH EQRQQPPQQQ PQPMLIMPRL PTQQPQQPAP QGIGMQAGDV TSGFSYENAV
VSYEQQIQQQ LKQQQQQQQQ QQQNLQQLDE PSSVNSSSSV GAGGDVENNE WHARNNDTNA
AATAALTNVL KGETTQATPP APPTKWSSEM NAMSSAASNG SSNTSHKQEW ATPRDHSTGG
GNSGYADNNE SNNHWNNSQG DGRRNSGNYQ RRGGDRDNRD RDQGGRGDER RNGGDRGNYR
SRQYGNSSNT NGRNSGNSSG VYFRNNESGN GGGNNYYQNG GGGGGTYNKE SRYESSGGGG
GSYRGQRGGN QQRNVNGSYG GGRPMGDRGR GGAGNQGGGG GGYINRQNQS QRMPLGLENK
N


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