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Capsid protein (CA1) (Coat protein)

 CAPSD_CAVAU             Reviewed;         449 AA.
P54087;
01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
01-OCT-1996, sequence version 1.
07-JUN-2017, entry version 61.
RecName: Full=Capsid protein;
AltName: Full=CA1;
AltName: Full=Coat protein;
Name=VP1;
Chicken anemia virus (isolate Australia) (CAV).
Viruses; ssDNA viruses; Circoviridae; Gyrovirus.
NCBI_TaxID=73474;
NCBI_TaxID=9031; Gallus gallus (Chicken).
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=8203122; DOI=10.1016/0378-1135(94)90097-3;
Pallister J., Fahey K.J., Sheppard M.;
"Cloning and sequencing of the chicken anaemia virus (CAV) ORF-3 gene,
and the development of an ELISA for the detection of serum antibody to
CAV.";
Vet. Microbiol. 39:167-178(1994).
-!- FUNCTION: Self-assembles to form the virion icosahedral capsid
with a T=1 symmetry. This very small capsid (25 nm in diameter)
allows the virus to be very stable in the environment and
resistant to some disinfectants, including detergents. Essential
for the initial attachment to host receptors. After attachment,
the virus is endocytosed and traffics to the nucleus. The capsid
protein binds and transports the viral genome and Rep across the
nuclear envelope (By similarity). {ECO:0000250}.
-!- SUBUNIT: Homomultimer (Potential). Interacts with Rep; this
interaction relocates Rep into the nucleus (By similarity).
{ECO:0000250, ECO:0000305}.
-!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000250}. Virion
{ECO:0000305}.
-!- INDUCTION: VP1 and VP2 are detected 12 hours post infection, while
VP3 only after 24 hours.
-!- SIMILARITY: Belongs to the gyrovirus capsid protein family.
{ECO:0000305}.
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EMBL; S71488; AAB30928.1; -; Genomic_DNA.
GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
GO; GO:0039615; C:T=1 icosahedral viral capsid; IEA:UniProtKB-KW.
GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO; GO:0075509; P:endocytosis involved in viral entry into host cell; IEA:UniProtKB-KW.
GO; GO:0075732; P:viral penetration into host nucleus; IEA:UniProtKB-KW.
GO; GO:0019062; P:virion attachment to host cell; IEA:UniProtKB-KW.
InterPro; IPR007291; Capsid_protein.
Pfam; PF04162; Gyro_capsid; 1.
2: Evidence at transcript level;
Capsid protein; DNA-binding; Host nucleus; Host-virus interaction;
Late protein; T=1 icosahedral capsid protein;
Viral attachment to host cell; Viral penetration into host cytoplasm;
Viral penetration into host nucleus; Virion;
Virus endocytosis by host; Virus entry into host cell.
CHAIN 1 449 Capsid protein.
/FTId=PRO_0000222999.
REGION 1 43 DNA-binding. {ECO:0000250}.
REGION 6 47 Nuclear localization signals.
{ECO:0000255}.
COMPBIAS 3 46 Arg-rich.
SEQUENCE 449 AA; 51872 MW; 8111DE3D0F47DE43 CRC64;
MARRARRPRG RFYAFRRGRW HHLKRLRRRY KFRHRRRQRY RRRAFRKAFH NPRPGTYSVR
LPNPQSTMTI RFQGVIFLTE GLILPKNSTA GGYADHMYGA RVAKISVNLK EFLLASMNLT
YVSKIGGPIA GELIADGSKS QAAENWPNCW LPLDNNVPSA TPSAWWRWAL MMMQPTDSCR
FFNHPKQMTL QDMGRMFGGW HLFRHIETRF QLLATKNEGS FSPVASLLSQ GEYLTRRDDV
KYSSDHQNRW RKGEQPMTGG IAYATGKMRP DEQQYPAMPP DPPIITSTTA QGTQVRCMYS
TQAWWSWDTY MSFATLTALG AQWSFPPGQR SVSRRSFNHH KARGAGDPKG QRWHTLVPLG
TETITDSYMG APASELDTNF FTLYVAQGTN KSQQYKFGTA TYALKEPVMK SDSWAVVRVQ
SVWQLGNRQR PYPWDVNWAN STMYWGTQP


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