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Capsid vertex protein (Gene product 24) (gp24) [Cleaved into: Mature capsid vertex protein (gp24*)]

 CAPSP_BPT4              Reviewed;         427 AA.
P19896;
01-FEB-1991, integrated into UniProtKB/Swiss-Prot.
01-FEB-1995, sequence version 2.
22-NOV-2017, entry version 82.
RecName: Full=Capsid vertex protein {ECO:0000255|HAMAP-Rule:MF_04113, ECO:0000303|PubMed:15071181};
AltName: Full=Gene product 24 {ECO:0000303|PubMed:15071181};
AltName: Full=gp24 {ECO:0000255|HAMAP-Rule:MF_04113, ECO:0000303|PubMed:15071181};
Contains:
RecName: Full=Mature capsid vertex protein {ECO:0000255|HAMAP-Rule:MF_04113};
AltName: Full=gp24* {ECO:0000255|HAMAP-Rule:MF_04113};
Name=24;
Enterobacteria phage T4 (Bacteriophage T4).
Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae;
Tevenvirinae; T4virus.
NCBI_TaxID=10665;
NCBI_TaxID=562; Escherichia coli.
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Yasuda G., Parker M.L., Doermann G.;
Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=12626685; DOI=10.1128/MMBR.67.1.86-156.2003;
Miller E.S., Kutter E., Mosig G., Arisaka F., Kunisawa T., Ruger W.;
"Bacteriophage T4 genome.";
Microbiol. Mol. Biol. Rev. 67:86-156(2003).
[3]
PROTEOLYTIC CLEAVAGE.
PubMed=1195380; DOI=10.1016/S0022-2836(75)80116-1;
Tsugita A., Black L.W., Showe M.K.;
"Protein cleavage during virus assembly: characterization of cleavage
in T4 phage.";
J. Mol. Biol. 98:215-217(1975).
[4]
REVIEW.
PubMed=21129201; DOI=10.1186/1743-422X-7-356;
Rao V.B., Black L.W.;
"Structure and assembly of bacteriophage T4 head.";
Virol. J. 7:356-356(2010).
[5]
STRUCTURE BY ELECTRON MICROSCOPY (15.0 ANGSTROMS), SUBUNIT, FUNCTION,
AND SUBCELLULAR LOCATION.
PubMed=11162794; DOI=10.1006/viro.2000.0735;
Olson N.H., Gingery M., Eiserling F.A., Baker T.S.;
"The structure of isometric capsids of bacteriophage T4.";
Virology 279:385-391(2001).
[6]
STRUCTURE BY ELECTRON MICROSCOPY (22.0 ANGSTROMS), FUNCTION, AND
SUBCELLULAR LOCATION.
PubMed=15071181; DOI=10.1073/pnas.0400444101;
Fokine A., Chipman P.R., Leiman P.G., Mesyanzhinov V.V., Rao V.B.,
Rossmann M.G.;
"Molecular architecture of the prolate head of bacteriophage T4.";
Proc. Natl. Acad. Sci. U.S.A. 101:6003-6008(2004).
[7]
X-RAY CRYSTALLOGRAPHY (2.9 ANGSTROMS).
PubMed=15878991; DOI=10.1073/pnas.0502164102;
Fokine A., Leiman P.G., Shneider M.M., Ahvazi B., Boeshans K.M.,
Steven A.C., Black L.W., Mesyanzhinov V.V., Rossmann M.G.;
"Structural and functional similarities between the capsid proteins of
bacteriophages T4 and HK97 point to a common ancestry.";
Proc. Natl. Acad. Sci. U.S.A. 102:7163-7168(2005).
-!- FUNCTION: Capsid protein that self-associates to form pentons,
building the capsid in association with hexamers of the major
capsid protein and one dodecamer of the portal protein. The capsid
vertex protein self-associates to form 11 pentons, building the
T=13 laevo capsid in association with 160 hexamers of the major
capsid protein. {ECO:0000255|HAMAP-Rule:MF_04113,
ECO:0000269|PubMed:11162794, ECO:0000269|PubMed:15071181}.
-!- SUBUNIT: Homopentamer. Interacts with the portal protein.
Interacts with the major capsid protein that forms 160 hexamers.
{ECO:0000255|HAMAP-Rule:MF_04113, ECO:0000269|PubMed:11162794}.
-!- SUBCELLULAR LOCATION: Capsid vertex protein: Virion. Note=Part of
the capsid icosahedric shell of the immature virion. The capsid
contains 55 copies. {ECO:0000255|HAMAP-Rule:MF_04113,
ECO:0000269|PubMed:11162794, ECO:0000269|PubMed:15071181}.
-!- SUBCELLULAR LOCATION: Mature capsid vertex protein: Virion.
Note=Part of the capsid icosahedric shell of the mature virion.
The capsid contains 55 copies. {ECO:0000255|HAMAP-Rule:MF_04113,
ECO:0000269|PubMed:11162794, ECO:0000269|PubMed:15071181}.
-!- PTM: A proteolytic cleavage gives rise to the mature capsid vertex
protein. {ECO:0000255|HAMAP-Rule:MF_04113,
ECO:0000269|PubMed:1195380}.
-!- SIMILARITY: Belongs to the Tevenvirinae capsid vertex family.
{ECO:0000305}.
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EMBL; AF158101; AAD42429.1; -; Genomic_DNA.
PIR; JF0074; GHBP24.
RefSeq; NP_049789.1; NC_000866.4.
PDB; 1YUE; X-ray; 2.90 A; A=1-427.
PDB; 5VF3; EM; 3.30 A; a=11-427.
PDBsum; 1YUE; -.
PDBsum; 5VF3; -.
ProteinModelPortal; P19896; -.
SMR; P19896; -.
GeneID; 1258587; -.
KEGG; vg:1258587; -.
OrthoDB; VOG0900009S; -.
EvolutionaryTrace; P19896; -.
Proteomes; UP000009087; Genome.
GO; GO:0039621; C:T=13 icosahedral viral capsid; IEA:UniProtKB-KW.
GO; GO:0019012; C:virion; IDA:CACAO.
HAMAP; MF_04113; CAPSID_P_T4; 1.
InterPro; IPR010762; Gp23/Gp24_T4-like.
Pfam; PF07068; Gp23; 1.
1: Evidence at protein level;
3D-structure; Capsid protein; Complete proteome; Late protein;
Reference proteome; Virion.
CHAIN 1 427 Capsid vertex protein.
/FTId=PRO_0000165012.
CHAIN 11 427 Mature capsid vertex protein.
/FTId=PRO_0000430269.
SITE 10 11 Cleavage. {ECO:0000255|HAMAP-
Rule:MF_04113,
ECO:0000269|PubMed:1195380}.
HELIX 3 12 {ECO:0000244|PDB:1YUE}.
HELIX 22 34 {ECO:0000244|PDB:1YUE}.
HELIX 37 39 {ECO:0000244|PDB:1YUE}.
STRAND 40 42 {ECO:0000244|PDB:1YUE}.
STRAND 47 55 {ECO:0000244|PDB:1YUE}.
TURN 89 94 {ECO:0000244|PDB:1YUE}.
STRAND 100 103 {ECO:0000244|PDB:1YUE}.
STRAND 106 110 {ECO:0000244|PDB:1YUE}.
STRAND 112 114 {ECO:0000244|PDB:1YUE}.
STRAND 116 118 {ECO:0000244|PDB:1YUE}.
HELIX 124 133 {ECO:0000244|PDB:1YUE}.
STRAND 136 139 {ECO:0000244|PDB:1YUE}.
STRAND 163 169 {ECO:0000244|PDB:1YUE}.
STRAND 171 180 {ECO:0000244|PDB:1YUE}.
HELIX 183 189 {ECO:0000244|PDB:1YUE}.
HELIX 197 221 {ECO:0000244|PDB:1YUE}.
HELIX 229 233 {ECO:0000244|PDB:1YUE}.
HELIX 248 264 {ECO:0000244|PDB:1YUE}.
STRAND 265 267 {ECO:0000244|PDB:1YUE}.
STRAND 271 274 {ECO:0000244|PDB:1YUE}.
HELIX 277 280 {ECO:0000244|PDB:1YUE}.
TURN 281 286 {ECO:0000244|PDB:1YUE}.
STRAND 287 290 {ECO:0000244|PDB:1YUE}.
STRAND 302 306 {ECO:0000244|PDB:1YUE}.
STRAND 309 314 {ECO:0000244|PDB:1YUE}.
STRAND 322 326 {ECO:0000244|PDB:1YUE}.
STRAND 329 331 {ECO:0000244|PDB:1YUE}.
STRAND 334 337 {ECO:0000244|PDB:1YUE}.
STRAND 339 349 {ECO:0000244|PDB:1YUE}.
STRAND 351 354 {ECO:0000244|PDB:1YUE}.
STRAND 356 370 {ECO:0000244|PDB:1YUE}.
STRAND 372 383 {ECO:0000244|PDB:1YUE}.
HELIX 385 387 {ECO:0000244|PDB:1YUE}.
TURN 392 397 {ECO:0000244|PDB:1YUE}.
TURN 403 405 {ECO:0000244|PDB:1YUE}.
STRAND 411 417 {ECO:0000244|PDB:1YUE}.
SEQUENCE 427 AA; 46993 MW; 120631DAD028ADD5 CRC64;
MAKINELLRE STTTNSNSIG RPNLVALTRA TTKLIYSDIV ATQRTNQPVA AFYGIKYLNP
DNEFTFKTGA TYAGEAGYVD REQITELTEE SKLTLNKGDL FKYNNIVYKV LEDTPFATIE
ESDLELALQI AIVLLKVRLF SDAASTSKFE SSDSEIADAR FQINKWQTAV KSRKLKTGIT
VELAQDLEAN GFDAPNFLED LLATEMADEI NKDILQSLIT VSKRYKVTGI TDSGFIDLSY
ASAPEAGRSL YRMVCEMVSH IQKESTYTAT FCVASARAAA ILAASGWLKH KPEDDKYLSQ
NAYGFLANGL PLYCDTNSPL DYVIVGVVEN IGEKEIVGSI FYAPYTEGLD LDDPEHVGAF
KVVVDPESLQ PSIGLLVRYA LSANPYTVAK DEKEARIIDG GDMDKMAGRS DLSVLLGVKL
PKIIIDE


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