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Caspase 9 (Caspase 9, isoform CRA_a) (Caspase-9) (Caspase-9 long isoform)

 Q9JHK1_RAT              Unreviewed;       454 AA.
Q9JHK1; F1M776;
01-OCT-2000, integrated into UniProtKB/TrEMBL.
01-OCT-2000, sequence version 1.
30-AUG-2017, entry version 143.
SubName: Full=Caspase 9, isoform CRA_a {ECO:0000313|EMBL:EDL81013.1};
SubName: Full=Caspase-9 {ECO:0000313|EMBL:AAF85658.1, ECO:0000313|Ensembl:ENSRNOP00000017972};
SubName: Full=Caspase-9 long isoform {ECO:0000313|EMBL:AAF99705.1};
Name=Casp9 {ECO:0000313|EMBL:EDL81013.1,
ECO:0000313|Ensembl:ENSRNOP00000017972, ECO:0000313|RGD:61867};
Synonyms=RNCASP9 {ECO:0000313|EMBL:AAF76217.1};
ORFNames=rCG_30964 {ECO:0000313|EMBL:EDL81013.1};
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116 {ECO:0000313|EMBL:AAF85658.1};
[1] {ECO:0000313|EMBL:AAF76217.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Sprague-Dawley {ECO:0000313|EMBL:AAF76217.1};
Itoh T., Itoh A., Pleasure D.;
Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|EMBL:AAK26235.1}
NUCLEOTIDE SEQUENCE.
STRAIN=WKY {ECO:0000313|EMBL:AAK26235.1};
PubMed=11695991; DOI=10.1042/0264-6021:3600049;
Nishiyama J., Yi X., Venkatachalam M.A., Dong Z.;
"cDNA cloning and promoter analysis of rat caspase-9.";
Biochem. J. 360:49-56(2001).
[3] {ECO:0000313|EMBL:AAK35159.1}
NUCLEOTIDE SEQUENCE.
PubMed=11278518; DOI=10.1074/jbc.M009523200;
Angelastro J.M., Moon N.Y., Liu D.X., Yang A.-S., Greene L.A.,
Franke T.F.;
"Characterization of a novel isoform of caspase-9 that inhibits
apoptosis.";
J. Biol. Chem. 276:12190-12200(2001).
[4] {ECO:0000313|EMBL:AAF85658.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Sprague-Dawley {ECO:0000313|EMBL:AAF85658.1};
TISSUE=Cerebellum {ECO:0000313|EMBL:AAF99705.1};
PubMed=15240811; DOI=10.1523/JNEUROSCI.1426-04.2004;
Cao G., Xiao M., Sun F., Xiao X., Pei W., Li J., Graham S.H.,
Simon R.P., Chen J.;
"Cloning of a novel Apaf-1-interacting protein: a potent suppressor of
apoptosis and ischemic neuronal cell death.";
J. Neurosci. 24:6189-6201(2004).
[5] {ECO:0000313|Ensembl:ENSRNOP00000017972, ECO:0000313|Proteomes:UP000002494}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000017972,
ECO:0000313|Proteomes:UP000002494};
PubMed=15057822; DOI=10.1038/nature02426;
Rat Genome Sequencing Project Consortium;
Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
Collins F.S.;
"Genome sequence of the Brown Norway rat yields insights into
mammalian evolution.";
Nature 428:493-521(2004).
[6] {ECO:0000313|EMBL:EDL81013.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BN {ECO:0000313|EMBL:EDL81013.1};
PubMed=15632090; DOI=10.1101/gr.2889405;
Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M.,
Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z.,
Istrail S., Li P., Sutton G.;
"Gene and alternative splicing annotation with AIR.";
Genome Res. 15:54-66(2005).
[7] {ECO:0000313|EMBL:EDL81013.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BN {ECO:0000313|EMBL:EDL81013.1};
Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H.,
Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M.,
Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L.,
Lu F., Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C.,
Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|Ensembl:ENSRNOP00000017972}
IDENTIFICATION.
STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000017972};
Ensembl;
Submitted (JUL-2011) to UniProtKB.
[9] {ECO:0000213|PubMed:22673903}
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=22673903;
Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A.,
Lundby C., Olsen J.V.;
"Quantitative maps of protein phosphorylation sites across 14
different rat organs and tissues.";
Nat. Commun. 3:876-876(2012).
[10] {ECO:0000313|Ensembl:ENSRNOP00000072710}
IDENTIFICATION.
STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000072710};
Ensembl;
Submitted (JUN-2015) to UniProtKB.
-!- SIMILARITY: Belongs to the peptidase C14A family.
{ECO:0000256|RuleBase:RU003971, ECO:0000256|SAAS:SAAS00535228}.
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EMBL; AABR07050305; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AF271996; AAF76217.1; -; mRNA.
EMBL; AF262319; AAF85658.1; -; mRNA.
EMBL; AF286006; AAF99705.1; -; mRNA.
EMBL; AY027667; AAK26235.1; -; mRNA.
EMBL; AF308469; AAK35159.1; -; mRNA.
EMBL; CH473968; EDL81013.1; -; Genomic_DNA.
RefSeq; NP_113820.1; NM_031632.1.
UniGene; Rn.32199; -.
IntAct; Q9JHK1; 2.
MINT; MINT-3369959; -.
STRING; 10116.ENSRNOP00000017972; -.
MEROPS; C14.010; -.
Ensembl; ENSRNOT00000017972; ENSRNOP00000017972; ENSRNOG00000012944.
Ensembl; ENSRNOT00000085378; ENSRNOP00000072710; ENSRNOG00000012944.
GeneID; 58918; -.
KEGG; rno:58918; -.
UCSC; RGD:61867; rat.
CTD; 842; -.
RGD; 61867; Casp9.
eggNOG; KOG3573; Eukaryota.
eggNOG; ENOG410ZQIE; LUCA.
GeneTree; ENSGT00760000118912; -.
HOGENOM; HOG000231878; -.
HOVERGEN; HBG059022; -.
KO; K04399; -.
OMA; GSWYIET; -.
TreeFam; TF102023; -.
Reactome; R-RNO-111458; Formation of apoptosome.
Reactome; R-RNO-111459; Activation of caspases through apoptosome-mediated cleavage.
Reactome; R-RNO-198323; AKT phosphorylates targets in the cytosol.
Reactome; R-RNO-418889; Ligand-independent caspase activation via DCC.
PRO; PR:Q9JHK1; -.
Proteomes; UP000002494; Chromosome 5.
Bgee; ENSRNOG00000012944; -.
GO; GO:0043293; C:apoptosome; IEA:Ensembl.
GO; GO:0005737; C:cytoplasm; IDA:RGD.
GO; GO:0005829; C:cytosol; IDA:RGD.
GO; GO:0005739; C:mitochondrion; IDA:RGD.
GO; GO:0005634; C:nucleus; IDA:RGD.
GO; GO:0097200; F:cysteine-type endopeptidase activity involved in execution phase of apoptosis; IBA:GO_Central.
GO; GO:0008234; F:cysteine-type peptidase activity; IDA:RGD.
GO; GO:0019901; F:protein kinase binding; IEA:Ensembl.
GO; GO:0017124; F:SH3 domain binding; IEA:Ensembl.
GO; GO:0006919; P:activation of cysteine-type endopeptidase activity involved in apoptotic process; IEA:Ensembl.
GO; GO:0007568; P:aging; IEP:RGD.
GO; GO:0006915; P:apoptotic process; IMP:RGD.
GO; GO:0071549; P:cellular response to dexamethasone stimulus; IEA:Ensembl.
GO; GO:0071407; P:cellular response to organic cyclic compound; IEP:RGD.
GO; GO:0034644; P:cellular response to UV; IEA:Ensembl.
GO; GO:0097194; P:execution phase of apoptosis; IBA:GO_Central.
GO; GO:0034349; P:glial cell apoptotic process; IEP:RGD.
GO; GO:0008630; P:intrinsic apoptotic signaling pathway in response to DNA damage; IBA:GO_Central.
GO; GO:0043065; P:positive regulation of apoptotic process; IMP:RGD.
GO; GO:0043525; P:positive regulation of neuron apoptotic process; IEA:Ensembl.
GO; GO:0006508; P:proteolysis; IDA:RGD.
GO; GO:2001020; P:regulation of response to DNA damage stimulus; IEA:Ensembl.
GO; GO:0046677; P:response to antibiotic; IEP:RGD.
GO; GO:0032025; P:response to cobalt ion; IEP:RGD.
GO; GO:0032355; P:response to estradiol; IEP:RGD.
GO; GO:0032496; P:response to lipopolysaccharide; IEP:RGD.
GO; GO:0014070; P:response to organic cyclic compound; IDA:RGD.
GO; GO:0042770; P:signal transduction in response to DNA damage; IEA:Ensembl.
CDD; cd00032; CASc; 1.
InterPro; IPR001315; CARD.
InterPro; IPR033171; Caspase-9.
InterPro; IPR029030; Caspase-like_dom.
InterPro; IPR033139; Caspase_cys_AS.
InterPro; IPR016129; Caspase_his_AS.
InterPro; IPR011029; DEATH-like_dom.
InterPro; IPR002138; Pept_C14_p10.
InterPro; IPR001309; Pept_C14_p20.
InterPro; IPR015917; Pept_C14A.
PANTHER; PTHR10454:SF173; PTHR10454:SF173; 1.
Pfam; PF00619; CARD; 1.
PRINTS; PR00376; IL1BCENZYME.
SMART; SM00114; CARD; 1.
SMART; SM00115; CASc; 1.
SUPFAM; SSF47986; SSF47986; 1.
SUPFAM; SSF52129; SSF52129; 1.
PROSITE; PS50209; CARD; 1.
PROSITE; PS01122; CASPASE_CYS; 1.
PROSITE; PS01121; CASPASE_HIS; 1.
PROSITE; PS50207; CASPASE_P10; 1.
PROSITE; PS50208; CASPASE_P20; 1.
1: Evidence at protein level;
Complete proteome {ECO:0000313|Proteomes:UP000002494};
Hydrolase {ECO:0000256|SAAS:SAAS00710708};
Protease {ECO:0000256|SAAS:SAAS00710708};
Proteomics identification {ECO:0000213|PeptideAtlas:Q9JHK1};
Reference proteome {ECO:0000313|Proteomes:UP000002494};
Thiol protease {ECO:0000256|SAAS:SAAS00710708}.
DOMAIN 1 92 CARD. {ECO:0000259|PROSITE:PS50209}.
DOMAIN 197 329 CASPASE_P20.
{ECO:0000259|PROSITE:PS50208}.
DOMAIN 369 453 CASPASE_P10.
{ECO:0000259|PROSITE:PS50207}.
SEQUENCE 454 AA; 50400 MW; 501623B29E6ED6FC CRC64;
MEEADRQLLR RCRVRLVREL QVAELWDALL SRELFTRDMI EDIQRAGSGS RRDQARQLVI
DLETRGRQAL PRFISCLEDT GQGSLASFLQ SSGQAAKQDP EAVTPLDHLV PVVLGPMGLK
SKEQKVVKLD PSQPALGNLT PVVLGPEELW PTRLRPEVLT PETPRPVDIG SGRAHDVCTP
GKIERHADMA YTLDSDPCGH CLIINNVNFC PSSGLSTRIG SHVDCEKLQH RFCWLRFMVE
VKNDLTAKKM VTALMEMAHR DHRALDCFVV VILSHGCQAS HLQFPGAVYG TDGCSVSIER
IVNIFNGTGC PSLGGKPKLF FIQACGGEQK DHGFEVAFTS SQDKAFDSDS EPDAVPYQEG
PRTLDQLDAV SSLPTPSDIL VSYSTFPGFV SWRDKKSGSW YIETLDGVLE QWARSEDLQS
LLLRVANAVS EKGVYKQIPG CFNFLRKKLF FKTS


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