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Chalcone--flavonone isomerase 1A (Chalcone isomerase 1A) (EC 5.5.1.6)

 CFI1A_SOYBN             Reviewed;         218 AA.
Q93XE6; C6TDS7;
11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
01-DEC-2001, sequence version 1.
22-NOV-2017, entry version 78.
RecName: Full=Chalcone--flavonone isomerase 1A;
Short=Chalcone isomerase 1A;
EC=5.5.1.6;
Name=CHI1A;
Glycine max (Soybean) (Glycine hispida).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae;
Phaseoleae; Glycine; Soja.
NCBI_TaxID=3847;
[1]
NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, INDUCTION, AND TISSUE
SPECIFICITY.
PubMed=15778463; DOI=10.1104/pp.104.054502;
Ralston L., Subramanian S., Matsuno M., Yu O.;
"Partial reconstruction of flavonoid and isoflavonoid biosynthesis in
yeast using soybean type I and type II chalcone isomerases.";
Plant Physiol. 137:1375-1388(2005).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Ching-Ren-Woo-Dou; TISSUE=Seed coat;
Chiu M.J., Chen S., Wang C.;
"Glycine max mRNA for chalcone isomerase.";
Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=cv. L66-14;
Liao R.-M., Chiu M.-H., Chen S.-H., Chu T.-M., Wang C.-S.;
"Molecular cloning of genes encoding two types of chalcone isomerase
in soybean (Glycine max).";
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Cheung F., Xiao Y., Chan A., Moskal W., Town C.D.;
Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Catalyzes the intramolecular cyclization of bicyclic
chalcones into tricyclic (S)-flavanones. Responsible for the
isomerization of 4,2',4',6'-tetrahydroxychalcone (also termed
chalcone) into naringenin. {ECO:0000269|PubMed:15778463}.
-!- CATALYTIC ACTIVITY: A chalcone = a flavanone.
-!- PATHWAY: Secondary metabolite biosynthesis; flavonoid
biosynthesis.
-!- TISSUE SPECIFICITY: Expressed in roots, shoots, flowers and seeds.
{ECO:0000269|PubMed:15778463}.
-!- INDUCTION: In roots by B.japonicum. {ECO:0000269|PubMed:15778463}.
-!- MISCELLANEOUS: Part of the biosynthetic pathway for all classes of
flavonoids, a large class of secondary plant metabolites, many of
which are brightly colored.
-!- SIMILARITY: Belongs to the chalcone isomerase family.
{ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=ACU19979.1; Type=Miscellaneous discrepancy; Note=Chimeric cDNA. A chimeric cDNA originating from chromosomes 19 and 20.; Evidence={ECO:0000305};
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EMBL; AY595413; AAT94358.1; -; mRNA.
EMBL; AF276302; AAK69432.1; -; mRNA.
EMBL; DQ191401; ABA86740.1; -; Genomic_DNA.
EMBL; BT095742; ACU19979.1; ALT_SEQ; mRNA.
RefSeq; NP_001235219.1; NM_001248290.1.
UniGene; Gma.30932; -.
ProteinModelPortal; Q93XE6; -.
SMR; Q93XE6; -.
STRING; 3847.GLYMA20G38560.1; -.
ProMEX; Q93XE6; -.
EnsemblPlants; GLYMA20G38560.1; GLYMA20G38560.1; GLYMA20G38560.
GeneID; 547602; -.
Gramene; GLYMA20G38560.1; GLYMA20G38560.1; GLYMA20G38560.
KEGG; gmx:547602; -.
eggNOG; ENOG410IJZH; Eukaryota.
eggNOG; ENOG410YEUK; LUCA.
InParanoid; Q93XE6; -.
KO; K01859; -.
OMA; FVEIWKS; -.
OrthoDB; EOG09360OSC; -.
BRENDA; 5.5.1.6; 2483.
UniPathway; UPA00154; -.
Proteomes; UP000008827; Chromosome 20.
Genevisible; Q93XE6; GM.
GO; GO:0005783; C:endoplasmic reticulum; IBA:GO_Central.
GO; GO:0045430; F:chalcone isomerase activity; IBA:GO_Central.
GO; GO:0009813; P:flavonoid biosynthetic process; IBA:GO_Central.
GO; GO:0080167; P:response to karrikin; IBA:GO_Central.
Gene3D; 1.10.890.20; -; 1.
Gene3D; 3.50.70.10; -; 1.
InterPro; IPR016087; Chalcone_isomerase.
InterPro; IPR016088; Chalcone_isomerase_3-sand.
InterPro; IPR016089; Chalcone_isomerase_bundle_sf.
InterPro; IPR036298; Chalcone_isomerase_sf.
Pfam; PF02431; Chalcone; 1.
SUPFAM; SSF54626; SSF54626; 1.
2: Evidence at transcript level;
Complete proteome; Flavonoid biosynthesis; Isomerase;
Reference proteome.
CHAIN 1 218 Chalcone--flavonone isomerase 1A.
/FTId=PRO_0000300850.
BINDING 47 47 Substrate. {ECO:0000250}.
BINDING 112 112 Substrate. {ECO:0000250}.
BINDING 189 189 Substrate. {ECO:0000250}.
SITE 105 105 Important for catalytic activity.
{ECO:0000250}.
SEQUENCE 218 AA; 23265 MW; 61C6990305849C10 CRC64;
MATISAVQVE FLEFPAVVTS PASGKTYFLG GAGERGLTIE GKFIKFTGIG VYLEDKAVPS
LAAKWKGKTS EELVHTLHFY RDIISGPFEK LIRGSKILPL AGAEYSKKVM ENCVAHMKSV
GTYGDAEAAA IEKFAEAFKN VNFAPGASVF YRQSPDGILG LSFSEDATIP EKEAAVIENK
AVSAAVLETM IGEHAVSPDL KRSLASRLPA VLSHGIIV


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