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Cherp protein (Fragment)

 B0JZL6_DANRE            Unreviewed;       532 AA.
B0JZL6;
18-MAR-2008, integrated into UniProtKB/TrEMBL.
18-MAR-2008, sequence version 1.
25-OCT-2017, entry version 49.
SubName: Full=Cherp protein {ECO:0000313|EMBL:AAI59233.1};
Flags: Fragment;
Name=cherp {ECO:0000313|EMBL:AAI59233.1,
ECO:0000313|ZFIN:ZDB-GENE-040407-1};
Danio rerio (Zebrafish) (Brachydanio rerio).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
Cyprinidae; Danio.
NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI59233.1};
[1] {ECO:0000313|EMBL:AAI59233.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Embryo {ECO:0000313|EMBL:AAI59233.1};
NIH - Zebrafish Gene Collection (ZGC) project;
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
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EMBL; BC159232; AAI59233.1; -; mRNA.
UniGene; Dr.75231; -.
PaxDb; B0JZL6; -.
ZFIN; ZDB-GENE-040407-1; cherp.
eggNOG; KOG4368; Eukaryota.
eggNOG; ENOG410YVN1; LUCA.
HOGENOM; HOG000010294; -.
HOVERGEN; HBG052716; -.
GO; GO:0003723; F:RNA binding; IEA:InterPro.
GO; GO:0006396; P:RNA processing; IEA:InterPro.
Gene3D; 1.25.40.90; -; 1.
InterPro; IPR006569; CID_dom.
InterPro; IPR008942; ENTH_VHS.
InterPro; IPR006903; RNA_pol_II-bd.
InterPro; IPR000061; Surp.
InterPro; IPR035967; SWAP/Surp_sf.
Pfam; PF04818; CTD_bind; 1.
Pfam; PF01805; Surp; 1.
SMART; SM00648; SWAP; 1.
SUPFAM; SSF109905; SSF109905; 1.
SUPFAM; SSF48464; SSF48464; 1.
PROSITE; PS51391; CID; 1.
PROSITE; PS50128; SURP; 1.
2: Evidence at transcript level;
DOMAIN 15 57 SURP motif.
{ECO:0000259|PROSITE:PS50128}.
DOMAIN 142 282 CID. {ECO:0000259|PROSITE:PS51391}.
NON_TER 532 532 {ECO:0000313|EMBL:AAI59233.1}.
SEQUENCE 532 AA; 60189 MW; 6FA5C28285F96570 CRC64;
MDISTPPEDQ ELRNVIDKLA QFVARNGPEF EKMTMEKQKD NAKFSFLFGG EFFGYYKYKL
AIEQQQLISN IPGNEAADVS ATMAILGPPA IPAAAPSMEE LIQQSQWNLQ QQEQHLLSLR
QEQITAAISL AMEQQMQKLL VETQLDMNEL DNLLQPIIDT CTKDAISAGK NWMFGNAKTP
QHCELMASHL RNRITADEAH FELRLHLIYL TNDVLHHCQR KNQKDLLAAL QKVVVPIYCT
SFLSVEEDKQ QKITRLLQLW EKNGYFDDVT IQQLQSPALG LGQYQASLIT EYAPVVQPIQ
MAFQQQIQAL KTQHEEFVSN LNQQQTVAAA AVAVAQLTPA DAEVTSQTPI ASQPADLKPP
LSGPPSSEYE GSQNRSSDSN PALSPEMSSS KPGWFDPQHN MPAWNPQQPP PFDPSQAPPP
CPPWNSHEGL WNEQRDPNWS DPRDGGPWSG QNDPPPSWSG QYEQPPWSSQ QDQPPPWGQR
EPPFRMQRPP HFRGPFPPHQ QPPPFNQPPP PHNFGRFPPR FMQDDFPPRH HF


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