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Chromodomain helicase hrp3 (EC 3.6.4.-) (ATP-dependent helicase hrp3)

 HRP3_SCHPO              Reviewed;        1388 AA.
O14139;
14-AUG-2001, integrated into UniProtKB/Swiss-Prot.
01-JAN-1998, sequence version 1.
05-JUL-2017, entry version 139.
RecName: Full=Chromodomain helicase hrp3;
EC=3.6.4.-;
AltName: Full=ATP-dependent helicase hrp3;
Name=hrp3; ORFNames=SPAC3G6.01;
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
NCBI_TaxID=284812;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=972 / ATCC 24843;
PubMed=11859360; DOI=10.1038/nature724;
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M.,
Collins M., Connor R., Cronin A., Davis P., Feltwell T., Fraser A.,
Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G.,
Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K.,
James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J.,
Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C.,
Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E.,
Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S.,
Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K.,
Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S.,
Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B.,
Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S.,
Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D.,
Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R.,
Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B.,
Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S.,
Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M.,
Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G.,
Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J.,
Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L.,
Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J.,
Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.;
"The genome sequence of Schizosaccharomyces pombe.";
Nature 415:871-880(2002).
[2]
GENE NAME, FUNCTION, AND SUBCELLULAR LOCATION.
PubMed=12127990; DOI=10.1016/S0006-291X(02)00797-0;
Yoo E.J., Jang Y.K., Lee M.A., Bjerling P., Kim J.B., Ekwall K.,
Seong R.H., Park S.D.;
"Hrp3, a chromodomain helicase/ATPase DNA binding protein, is required
for heterochromatin silencing in fission yeast.";
Biochem. Biophys. Res. Commun. 295:970-974(2002).
[3]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1250 AND SER-1285, AND
IDENTIFICATION BY MASS SPECTROMETRY.
PubMed=18257517; DOI=10.1021/pr7006335;
Wilson-Grady J.T., Villen J., Gygi S.P.;
"Phosphoproteome analysis of fission yeast.";
J. Proteome Res. 7:1088-1097(2008).
-!- FUNCTION: Involved in heterochromatin silencing. Required for
transcriptional repression at the silence loci of mat3, where it
has a direct role as a chromatin remodeling factor.
{ECO:0000269|PubMed:12127990}.
-!- INTERACTION:
P40381:swi6; NbExp=2; IntAct=EBI-7414157, EBI-926939;
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:12127990}.
-!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family.
{ECO:0000305}.
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EMBL; CU329670; CAB16277.1; -; Genomic_DNA.
PIR; T38720; T38720.
RefSeq; NP_594967.1; NM_001020398.2.
ProteinModelPortal; O14139; -.
SMR; O14139; -.
BioGrid; 279497; 290.
IntAct; O14139; 3.
MINT; MINT-4670837; -.
STRING; 4896.SPAC3G6.01.1; -.
iPTMnet; O14139; -.
SwissPalm; O14139; -.
MaxQB; O14139; -.
PRIDE; O14139; -.
EnsemblFungi; SPAC3G6.01.1; SPAC3G6.01.1:pep; SPAC3G6.01.
GeneID; 2543064; -.
KEGG; spo:SPAC3G6.01; -.
EuPathDB; FungiDB:SPAC3G6.01; -.
PomBase; SPAC3G6.01; hrp3.
HOGENOM; HOG000207917; -.
InParanoid; O14139; -.
KO; K11367; -.
OMA; SIKGEMR; -.
OrthoDB; EOG092C1YH4; -.
PhylomeDB; O14139; -.
PRO; PR:O14139; -.
Proteomes; UP000002485; Chromosome I.
GO; GO:0031934; C:mating-type region heterochromatin; IDA:PomBase.
GO; GO:0000790; C:nuclear chromatin; NAS:PomBase.
GO; GO:0005634; C:nucleus; IDA:PomBase.
GO; GO:0005524; F:ATP binding; IC:PomBase.
GO; GO:0003677; F:DNA binding; NAS:PomBase.
GO; GO:0008094; F:DNA-dependent ATPase activity; ISM:PomBase.
GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO; GO:0070615; F:nucleosome-dependent ATPase activity; IDA:PomBase.
GO; GO:0006338; P:chromatin remodeling; NAS:PomBase.
GO; GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:PomBase.
GO; GO:0034728; P:nucleosome organization; IMP:PomBase.
GO; GO:0060303; P:regulation of nucleosome density; IMP:PomBase.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
InterPro; IPR000953; Chromo/chromo_shadow_dom.
InterPro; IPR023780; Chromo_domain.
InterPro; IPR016197; Chromodomain-like.
InterPro; IPR023779; Chromodomain_CS.
InterPro; IPR025260; DUF4208.
InterPro; IPR014001; Helicase_ATP-bd.
InterPro; IPR001650; Helicase_C.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR000330; SNF2_N.
Pfam; PF00385; Chromo; 2.
Pfam; PF13907; DUF4208; 1.
Pfam; PF00271; Helicase_C; 1.
Pfam; PF00176; SNF2_N; 1.
SMART; SM00298; CHROMO; 2.
SMART; SM00487; DEXDc; 1.
SMART; SM01176; DUF4208; 1.
SMART; SM00490; HELICc; 1.
SUPFAM; SSF52540; SSF52540; 2.
SUPFAM; SSF54160; SSF54160; 2.
PROSITE; PS00598; CHROMO_1; 1.
PROSITE; PS50013; CHROMO_2; 2.
PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PROSITE; PS51194; HELICASE_CTER; 1.
1: Evidence at protein level;
ATP-binding; Complete proteome; DNA-binding; Helicase; Hydrolase;
Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome;
Repeat; Repressor; Transcription; Transcription regulation.
CHAIN 1 1388 Chromodomain helicase hrp3.
/FTId=PRO_0000080242.
DOMAIN 191 260 Chromo 1. {ECO:0000255|PROSITE-
ProRule:PRU00053}.
DOMAIN 288 349 Chromo 2. {ECO:0000255|PROSITE-
ProRule:PRU00053}.
DOMAIN 387 557 Helicase ATP-binding.
{ECO:0000255|PROSITE-ProRule:PRU00541}.
DOMAIN 694 852 Helicase C-terminal.
{ECO:0000255|PROSITE-ProRule:PRU00542}.
NP_BIND 400 407 ATP. {ECO:0000255|PROSITE-
ProRule:PRU00541}.
MOTIF 508 511 DEAH box.
COMPBIAS 169 175 Poly-Glu.
COMPBIAS 947 950 Poly-Glu.
MOD_RES 1250 1250 Phosphoserine.
{ECO:0000269|PubMed:18257517}.
MOD_RES 1285 1285 Phosphoserine.
{ECO:0000269|PubMed:18257517}.
SEQUENCE 1388 AA; 159379 MW; F7B431084BD29F8D CRC64;
MSTSAIALAL SSSKAIEQLD HVQTETPNLK QEMSESPSNS GVASKRKLQS TEWLDPELYG
LRRSGRTRSN PGRYVDTDDQ EDVFPSKHRK GTRNGSSFSR HRTIRDLDDE AESVTSEESE
SDDSSYGGTP KKRSRQKKSN TYVQDEIRFS SRNSKGVNYN EDAYFESFEE EEEEEMYEYA
TEVSEEPEDT RAIDVVLDHR LIEGHDGSTP SEDYEFLIKW VNFSHLHCTW EPYNNISMIR
GSKKVDNHIK QVILLDREIR EDPTTTREDI EAMDIEKERK RENYEEYKQV DRIVAKHLNS
DGSVEYLVKW KQLLYDFCTW EASSIIEPIA ATEIQAFQER EESALSPSRG TNYGNSRPKY
RKLEQQPSYI TGGELRDFQL TGVNWMAYLW HKNENGILAD EMGLGKTVQT VAFLSYLAHS
LRQHGPFLVV VPLSTVPAWQ ETLALWASDM NCISYLGNTT SRQVIRDYEF YVDGTQKIKF
NLLLTTYEYV LKDRSVLSNI KWQYMAIDEA HRLKNSESSL YEALSQFKNS NRLLITGTPL
QNNIRELAAL VDFLMPGKFE IREEINLEAP DEEQEAYIRS LQEHLQPYIL RRLKKDVEKS
LPSKSERILR VELSDLQMYW YKNILTRNYR VLTQSISSGS QISLLNIVVE LKKASNHPYL
FDGVEESWMQ KINSQGRRDE VLKGLIMNSG KMVLLDKLLS RLRRDGHRVL IFSQMVRMLD
ILGDYLSLRG YPHQRLDGTV PAAVRRTSID HFNAPNSPDF VFLLSTRAGG LGINLMTADT
VIIFDSDWNP QADLQAMARA HRIGQKNHVM VYRLLSKDTI EEDVLERARR KMILEYAIIS
LGVTDKQKNS KNDKFSAEEL SAILKFGASN MFKAENNQKK LEDMNLDEIL EHAEDHDTSN
DVGGASMGGE EFLKQFEVTD YKADVSWDDI IPLTEREKFE EEDRLREEEE ALKQEIELSS
RRGNRPYPSS AVESPSYSGT SERKSKKQML KDEVLLEKEI RLLYRAMIRY GSLEHRYNDI
VKYADLTTQD AHVIKKIAAD LVTASRKAVS AAEKDLSNDQ SNNKSSRKAL LITFKGVKNI
NAETLVQRLN DLDILYDAMP TSGYSNFQIP MHVRSVHGWS CQWGPREDSM LLSGICKHGF
GAWLEIRDDP ELKMKDKIFL EDTKQTDNSV PKDKENKEKK VPSAVHLVRR GEYLLSALRE
HHQNFGIKSS PAISTNGKTQ PKKQTANRRQ SGKPNVKSAQ KIESATRTPS PAISESRKKP
SSKDTKIETP SREQSRSQTA SPVKSEKDDG NVSLNAEQKA RCKELMYPVR KHMKRLRKDS
SGLGRAELVK LLTECLTTIG KHIEKTVNDT PSEEKATVRK NLWMFACYFW PKEEVKYTSL
ISMYEKMK


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