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Class 2 porin (Class 2 porin protein) (PorB protein) (Fragment)

 Q9Z3B6_NEIME            Unreviewed;       317 AA.
Q9Z3B6;
01-MAY-1999, integrated into UniProtKB/TrEMBL.
01-MAY-1999, sequence version 1.
20-JUN-2018, entry version 86.
SubName: Full=Class 2 porin protein {ECO:0000313|EMBL:AAX83414.1};
SubName: Full=PorB protein {ECO:0000313|EMBL:AAC98938.1};
Flags: Fragment;
Name=porB {ECO:0000313|EMBL:AAC98938.1};
Neisseria meningitidis.
Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales;
Neisseriaceae; Neisseria.
NCBI_TaxID=487 {ECO:0000313|EMBL:AAC98938.1};
[1] {ECO:0000313|EMBL:AAC98938.1}
NUCLEOTIDE SEQUENCE.
STRAIN=N.348/97 {ECO:0000313|EMBL:AAC98937.1},
N.517/97 {ECO:0000313|EMBL:AAC98938.1},
N.571/97 {ECO:0000313|EMBL:AAC98936.1}, and
N.753/97 {ECO:0000313|EMBL:AAC98935.1};
Sacchi C.T., Lemos A.P.S., Whitney A.M., Mayer L.W.;
"Neisseria meningitidis porin protein (PorB - class 2).";
Submitted (JAN-1998) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|EMBL:AAX83414.1}
NUCLEOTIDE SEQUENCE.
STRAIN=N.753-00 {ECO:0000313|EMBL:AAX83414.1};
Lemos A.P., Yara T.I.;
"Neisseria meningitidis PorB variable-region typing nomenclature.";
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:AAX98244.1}
NUCLEOTIDE SEQUENCE.
STRAIN=N.04/03 {ECO:0000313|EMBL:AAX98263.1},
N.1005/01 {ECO:0000313|EMBL:AAX98265.1},
N.1013/02 {ECO:0000313|EMBL:AAX98250.1},
N.1037/01 {ECO:0000313|EMBL:AAX98266.1},
N.1072/01 {ECO:0000313|EMBL:AAX98247.1},
N.111/00 {ECO:0000313|EMBL:AAX98253.1},
N.140/03 {ECO:0000313|EMBL:AAX98257.1},
N.174/00 {ECO:0000313|EMBL:AAX98252.1},
N.274/03 {ECO:0000313|EMBL:AAX98258.1},
N.277/03 {ECO:0000313|EMBL:AAX98260.1},
N.297/02 {ECO:0000313|EMBL:AAX98259.1},
N.3/94 {ECO:0000313|EMBL:AAX98246.1},
N.356/01 {ECO:0000313|EMBL:AAX98262.1},
N.534/02 {ECO:0000313|EMBL:AAX98261.1},
N.541/98 {ECO:0000313|EMBL:AAX98251.1},
N.563/02 {ECO:0000313|EMBL:AAX98244.1},
N.590/97 {ECO:0000313|EMBL:AAX98267.1},
N.657/99 {ECO:0000313|EMBL:AAX98248.1},
N.660/02 {ECO:0000313|EMBL:AAX98245.1},
N.684/99 {ECO:0000313|EMBL:AAX98254.1},
N.887/94 {ECO:0000313|EMBL:AAX98264.1},
N.892/96 {ECO:0000313|EMBL:AAX98255.1},
N.910/02 {ECO:0000313|EMBL:AAX98256.1}, and
N.958/01 {ECO:0000313|EMBL:AAX98249.1};
Lemos A.P.S., Yara T.I.;
"Neisseria meningitidis PorB variable-region typing nomenclature.";
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
[4] {ECO:0000313|EMBL:AAY87127.1}
NUCLEOTIDE SEQUENCE.
STRAIN=N.1020/01 {ECO:0000313|EMBL:AAY87137.1},
N.186/00 {ECO:0000313|EMBL:AAY87135.1},
N.260/92 {ECO:0000313|EMBL:AAY87128.1},
N.282/00 {ECO:0000313|EMBL:AAY87127.1},
N.343/99 {ECO:0000313|EMBL:AAY87132.1},
N.470/97 {ECO:0000313|EMBL:AAY87133.1},
N.501/01 {ECO:0000313|EMBL:AAY87130.1},
N.617/00 {ECO:0000313|EMBL:AAY87136.1},
N.820/01 {ECO:0000313|EMBL:AAY87129.1},
N.879/98 {ECO:0000313|EMBL:AAY87131.1}, and
N.971/97 {ECO:0000313|EMBL:AAY87134.1};
Lemos A.P.S., Yara T.I.;
"Neisseria meningitidis PorB variable-region typing nomenclature.";
Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
[5] {ECO:0000313|EMBL:AAY66475.1}
NUCLEOTIDE SEQUENCE.
STRAIN=N.1097/90 {ECO:0000313|EMBL:AAY66478.1},
N.1243/95 {ECO:0000313|EMBL:AAY66477.1},
N.176/03 {ECO:0000313|EMBL:AAY66487.1},
N.197/03 {ECO:0000313|EMBL:AAY66488.1},
N.268/97 {ECO:0000313|EMBL:AAY66475.1},
N.567/03 {ECO:0000313|EMBL:AAY66490.1},
N.607/02 {ECO:0000313|EMBL:AAY66482.1},
N.667/00 {ECO:0000313|EMBL:AAY66480.1},
N.668/00 {ECO:0000313|EMBL:AAY66481.1},
N.687/03 {ECO:0000313|EMBL:AAY66486.1},
N.771/03 {ECO:0000313|EMBL:AAY66489.1},
N.840/93 {ECO:0000313|EMBL:AAY66476.1},
N.910/98 {ECO:0000313|EMBL:AAY66479.1},
N.929/02 {ECO:0000313|EMBL:AAY66484.1},
N.94/02 {ECO:0000313|EMBL:AAY66483.1}, and
N.996/02 {ECO:0000313|EMBL:AAY66485.1};
Lemos A.P., Yara T.I.;
"Neisseria meningitidis PorB variable-region typing nomenclature.";
Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
[6] {ECO:0000313|EMBL:AAX83414.1}
NUCLEOTIDE SEQUENCE.
STRAIN=N.753-00 {ECO:0000313|EMBL:AAX83414.1};
PubMed=17314227; DOI=10.1128/JCM.02510-06;
de Lemos A.P., Yara T.Y., Gorla M.C., de Paiva M.V., de Souza A.L.,
Goncalves M.I., de Almeida S.C., do Valle G.R., Sacchi C.T.;
"Clonal distribution of invasive Neisseria meningitidis serogroup C
strains circulating from 1976 to 2005 in greater Sao Paulo, Brazil.";
J. Clin. Microbiol. 45:1266-1273(2007).
-!- SUBUNIT: Homotrimer. {ECO:0000256|RuleBase:RU000469}.
-!- SUBCELLULAR LOCATION: Cell outer membrane
{ECO:0000256|RuleBase:RU000469}; Multi-pass membrane protein
{ECO:0000256|RuleBase:RU000469}.
-!- SIMILARITY: Belongs to the Gram-negative porin family.
{ECO:0000256|RuleBase:RU000469}.
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EMBL; AF043050; AAC98935.1; -; Genomic_DNA.
EMBL; AF043051; AAC98936.1; -; Genomic_DNA.
EMBL; AF043052; AAC98937.1; -; Genomic_DNA.
EMBL; AF043053; AAC98938.1; -; Genomic_DNA.
EMBL; AY972814; AAX83414.1; -; Genomic_DNA.
EMBL; AY995859; AAX98244.1; -; Genomic_DNA.
EMBL; AY995860; AAX98245.1; -; Genomic_DNA.
EMBL; AY995861; AAX98246.1; -; Genomic_DNA.
EMBL; AY995862; AAX98247.1; -; Genomic_DNA.
EMBL; AY995863; AAX98248.1; -; Genomic_DNA.
EMBL; AY995864; AAX98249.1; -; Genomic_DNA.
EMBL; AY995865; AAX98250.1; -; Genomic_DNA.
EMBL; AY995866; AAX98251.1; -; Genomic_DNA.
EMBL; AY995867; AAX98252.1; -; Genomic_DNA.
EMBL; AY995868; AAX98253.1; -; Genomic_DNA.
EMBL; AY995869; AAX98254.1; -; Genomic_DNA.
EMBL; AY995870; AAX98255.1; -; Genomic_DNA.
EMBL; AY995871; AAX98256.1; -; Genomic_DNA.
EMBL; AY995872; AAX98257.1; -; Genomic_DNA.
EMBL; AY995873; AAX98258.1; -; Genomic_DNA.
EMBL; AY995874; AAX98259.1; -; Genomic_DNA.
EMBL; AY995875; AAX98260.1; -; Genomic_DNA.
EMBL; AY995876; AAX98261.1; -; Genomic_DNA.
EMBL; AY995877; AAX98262.1; -; Genomic_DNA.
EMBL; AY995878; AAX98263.1; -; Genomic_DNA.
EMBL; AY995879; AAX98264.1; -; Genomic_DNA.
EMBL; AY995880; AAX98265.1; -; Genomic_DNA.
EMBL; AY995881; AAX98266.1; -; Genomic_DNA.
EMBL; AY995882; AAX98267.1; -; Genomic_DNA.
EMBL; DQ067099; AAY66475.1; -; Genomic_DNA.
EMBL; DQ067100; AAY66476.1; -; Genomic_DNA.
EMBL; DQ067101; AAY66477.1; -; Genomic_DNA.
EMBL; DQ067102; AAY66478.1; -; Genomic_DNA.
EMBL; DQ067103; AAY66479.1; -; Genomic_DNA.
EMBL; DQ067104; AAY66480.1; -; Genomic_DNA.
EMBL; DQ067105; AAY66481.1; -; Genomic_DNA.
EMBL; DQ067106; AAY66482.1; -; Genomic_DNA.
EMBL; DQ067107; AAY66483.1; -; Genomic_DNA.
EMBL; DQ067108; AAY66484.1; -; Genomic_DNA.
EMBL; DQ067109; AAY66485.1; -; Genomic_DNA.
EMBL; DQ067110; AAY66486.1; -; Genomic_DNA.
EMBL; DQ067111; AAY66487.1; -; Genomic_DNA.
EMBL; DQ067112; AAY66488.1; -; Genomic_DNA.
EMBL; DQ067113; AAY66489.1; -; Genomic_DNA.
EMBL; DQ067114; AAY66490.1; -; Genomic_DNA.
EMBL; DQ071621; AAY87127.1; -; Genomic_DNA.
EMBL; DQ071622; AAY87128.1; -; Genomic_DNA.
EMBL; DQ071623; AAY87129.1; -; Genomic_DNA.
EMBL; DQ071624; AAY87130.1; -; Genomic_DNA.
EMBL; DQ071625; AAY87131.1; -; Genomic_DNA.
EMBL; DQ071626; AAY87132.1; -; Genomic_DNA.
EMBL; DQ071627; AAY87133.1; -; Genomic_DNA.
EMBL; DQ071628; AAY87134.1; -; Genomic_DNA.
EMBL; DQ071629; AAY87135.1; -; Genomic_DNA.
EMBL; DQ071630; AAY87136.1; -; Genomic_DNA.
EMBL; DQ071631; AAY87137.1; -; Genomic_DNA.
DIP; DIP-58637N; -.
IntAct; Q9Z3B6; 1.
GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
GO; GO:0046930; C:pore complex; IEA:UniProtKB-KW.
GO; GO:0042802; F:identical protein binding; IPI:IntAct.
GO; GO:0015288; F:porin activity; IEA:UniProtKB-KW.
GO; GO:0006811; P:ion transport; IEA:UniProtKB-KW.
CDD; cd00342; gram_neg_porins; 1.
Gene3D; 2.40.160.10; -; 1.
InterPro; IPR033900; Gram_neg_porin_domain.
InterPro; IPR023614; Porin_dom_sf.
InterPro; IPR001702; Porin_Gram-ve.
InterPro; IPR013793; Porin_Gram-ve_CS.
InterPro; IPR002299; Porin_Neis.
Pfam; PF00267; Porin_1; 1.
PRINTS; PR00182; ECOLNEIPORIN.
PRINTS; PR00184; NEISSPPORIN.
PROSITE; PS00576; GRAM_NEG_PORIN; 1.
3: Inferred from homology;
Cell outer membrane {ECO:0000256|RuleBase:RU000469};
Ion transport {ECO:0000256|RuleBase:RU000469,
ECO:0000256|SAAS:SAAS00710561};
Membrane {ECO:0000256|RuleBase:RU000469,
ECO:0000256|SAAS:SAAS00710561, ECO:0000256|SAAS:SAAS00710668};
Porin {ECO:0000256|RuleBase:RU000469, ECO:0000256|SAAS:SAAS00710561};
Transmembrane {ECO:0000256|RuleBase:RU000469,
ECO:0000256|SAAS:SAAS00710561, ECO:0000256|SAAS:SAAS00710668};
Transmembrane beta strand {ECO:0000256|SAAS:SAAS00710668};
Transport {ECO:0000256|RuleBase:RU000469,
ECO:0000256|SAAS:SAAS00710561}.
NON_TER 1 1 {ECO:0000313|EMBL:AAC98938.1}.
NON_TER 317 317 {ECO:0000313|EMBL:AAC98938.1}.
SEQUENCE 317 AA; 34205 MW; 4BFDF8D621C1AEF1 CRC64;
EVSRVKNQGV KTKTATQIAD FGSKIGFKGQ EDLGNGMKAI WQLEQKASIA GTNSGWGNRQ
SFIGLKGGFG TVRVGNLNTV LKDSGDNVNA WESGSNTGDV LGLGTIGRVE SREISVRYDS
PVFAGFSGSV QYVPRDNAND KDKYTHKQSS RESYHAGLKY ENAGFFGQYA GSFAKYADLK
DNAERVAVGT TGAHPVKDYQ VHRVVAGYDA NDLYVSVAGQ YEAAKNNDTN PATNGKKLEQ
TQVAATAAYR FGNVTPRVSY AHGFKAKVNG KKAARYQYDQ VIVGADYDFS KRTSALVSVG
WLKEGKGVNK TEKTASM


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