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Clathrin heavy chain

 E3LRX1_CAERE            Unreviewed;      1698 AA.
E3LRX1;
11-JAN-2011, integrated into UniProtKB/TrEMBL.
11-JAN-2011, sequence version 1.
22-NOV-2017, entry version 38.
RecName: Full=Clathrin heavy chain {ECO:0000256|PIRNR:PIRNR002290};
Name=Cre-chc-1 {ECO:0000313|EMBL:EFP09165.1};
ORFNames=CRE_25498 {ECO:0000313|EMBL:EFP09165.1};
Caenorhabditis remanei (Caenorhabditis vulgaris).
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
NCBI_TaxID=31234 {ECO:0000313|Proteomes:UP000008281};
[1] {ECO:0000313|Proteomes:UP000008281}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=PB4641 {ECO:0000313|Proteomes:UP000008281};
Caenorhabditis remanei Sequencing Consortium;
Wilson R.K.;
"PCAP assembly of the Caenorhabditis remanei genome.";
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Clathrin is the major protein of the polyhedral coat of
coated pits and vesicles. {ECO:0000256|PIRNR:PIRNR002290}.
-!- SUBCELLULAR LOCATION: Cytoplasmic vesicle membrane
{ECO:0000256|PIRNR:PIRNR002290}; Peripheral membrane protein
{ECO:0000256|PIRNR:PIRNR002290}; Cytoplasmic side
{ECO:0000256|PIRNR:PIRNR002290}. Membrane, coated pit
{ECO:0000256|PIRNR:PIRNR002290}; Peripheral membrane protein
{ECO:0000256|PIRNR:PIRNR002290}; Cytoplasmic side
{ECO:0000256|PIRNR:PIRNR002290}.
-!- SIMILARITY: Belongs to the clathrin heavy chain family.
{ECO:0000256|PIRNR:PIRNR002290}.
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EMBL; DS268414; EFP09165.1; -; Genomic_DNA.
RefSeq; XP_003112911.1; XM_003112863.1.
STRING; 31234.CRE25498; -.
EnsemblMetazoa; CRE25498; CRE25498; WBGene00054928.
GeneID; 9825215; -.
CTD; 9825215; -.
eggNOG; KOG0985; Eukaryota.
eggNOG; ENOG410XPH1; LUCA.
InParanoid; E3LRX1; -.
OMA; VQQCTAF; -.
OrthoDB; EOG091G009O; -.
Proteomes; UP000008281; Unassembled WGS sequence.
GO; GO:0016324; C:apical plasma membrane; IEA:EnsemblMetazoa.
GO; GO:0005938; C:cell cortex; IEA:EnsemblMetazoa.
GO; GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.
GO; GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.
GO; GO:0071439; C:clathrin complex; IEA:InterPro.
GO; GO:0045334; C:clathrin-coated endocytic vesicle; IEA:EnsemblMetazoa.
GO; GO:0009898; C:cytoplasmic side of plasma membrane; IEA:EnsemblMetazoa.
GO; GO:0072686; C:mitotic spindle; IEA:EnsemblMetazoa.
GO; GO:0032051; F:clathrin light chain binding; IEA:InterPro.
GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
GO; GO:0045176; P:apical protein localization; IEA:EnsemblMetazoa.
GO; GO:0048268; P:clathrin coat assembly; IEA:InterPro.
GO; GO:0030866; P:cortical actin cytoskeleton organization; IEA:EnsemblMetazoa.
GO; GO:0008340; P:determination of adult lifespan; IEA:EnsemblMetazoa.
GO; GO:0009792; P:embryo development ending in birth or egg hatching; IEA:EnsemblMetazoa.
GO; GO:0006886; P:intracellular protein transport; IEA:UniProtKB-UniRule.
GO; GO:2000370; P:positive regulation of clathrin-dependent endocytosis; IEA:EnsemblMetazoa.
GO; GO:0006898; P:receptor-mediated endocytosis; IEA:EnsemblMetazoa.
Gene3D; 1.25.40.10; -; 4.
Gene3D; 1.25.40.30; -; 1.
InterPro; IPR016024; ARM-type_fold.
InterPro; IPR000547; Clathrin_H-chain/VPS_repeat.
InterPro; IPR012331; Clathrin_H-chain_linker.
InterPro; IPR015348; Clathrin_H-chain_linker_core.
InterPro; IPR022365; Clathrin_H-chain_propeller_rpt.
InterPro; IPR016341; Clathrin_heavy_chain.
InterPro; IPR011990; TPR-like_helical_dom_sf.
Pfam; PF00637; Clathrin; 7.
Pfam; PF09268; Clathrin-link; 1.
Pfam; PF01394; Clathrin_propel; 4.
PIRSF; PIRSF002290; Clathrin_H_chain; 1.
SMART; SM00299; CLH; 7.
SUPFAM; SSF48371; SSF48371; 6.
PROSITE; PS50236; CHCR; 7.
3: Inferred from homology;
Coated pit {ECO:0000256|PIRNR:PIRNR002290};
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000008281};
Cytoplasmic vesicle {ECO:0000256|PIRNR:PIRNR002290};
Membrane {ECO:0000256|PIRNR:PIRNR002290};
Reference proteome {ECO:0000313|Proteomes:UP000008281}.
DOMAIN 344 367 Clathrin-link.
{ECO:0000259|Pfam:PF09268}.
REPEAT 551 702 CHCR. {ECO:0000256|PROSITE-
ProRule:PRU01006}.
REPEAT 705 847 CHCR. {ECO:0000256|PROSITE-
ProRule:PRU01006}.
REPEAT 852 991 CHCR. {ECO:0000256|PROSITE-
ProRule:PRU01006}.
REPEAT 998 1143 CHCR. {ECO:0000256|PROSITE-
ProRule:PRU01006}.
REPEAT 1147 1288 CHCR. {ECO:0000256|PROSITE-
ProRule:PRU01006}.
REPEAT 1293 1439 CHCR. {ECO:0000256|PROSITE-
ProRule:PRU01006}.
REPEAT 1442 1585 CHCR. {ECO:0000256|PROSITE-
ProRule:PRU01006}.
COILED 1622 1650 {ECO:0000256|SAM:Coils}.
SEQUENCE 1698 AA; 193336 MW; 449F6E75B14ABBF0 CRC64;
MAALPIKFHE HLQLPNAGIR VPNITFSNVT MESDKNIVVR EMVSSKTVSE VYCLIQIGDQ
QQVVIIDMAD TANPTRRPIS ADSVIMHPTA KILALKSGKT LQIFNIELKA KVKAHQNVEE
VVYWKWISEK MIALVSDTAV YHWSIEGDAA PVKMFDRHQS LAGTQIINYR ADAENKWLVL
IGISAKDSRV VGSMQLYSTE RKVSQPIEGH AASFVRFKVD GNPHPSNLFC FSVKTDNGGK
LHIIEVGTPA TGNTPFQKKN VDVPYTADTA SDFPVSMQVS TKQGVIYLVT KQGYVHLYDV
ESGTRIYSNR ISTDTVFVTC EYTATGGIMG INRKGQVLSV SIDEANLVPF VTNQLQNPDL
ALKLAVRCDL PGAEELFVRK FNLLFSNGQF GEAAKVAASA PQGILRTPAT IQKFQQCPST
GAGPSPLLQY FGILLDQGKL NKYETLELCR PVLAQGRKEL VNKWLNDQKL ECCEELGDLI
KPHDVNTALS VYLRGNVPHK VVQSFAETGQ FDKIVMYAKR VGFQPDYLFQ LRQILRNSNP
DNGAKFAQLL VSESENGEPL ADLSQVIIID CFMEVQAVQP CTSFLLEVLK GDKPEEGHLQ
TRLLEMNLLA APAVADAILA NKMFSHYDRA AIGQLCEKAG LLQRALEHFT DLYDIKRTVV
HTHLLKPDWL VGYFGSLSVE DSLECLKAML TQNIRQNLQV VVQIASKYHE QLGADKLIEM
FETHKSYEGL FYFLGSIVNF SQDPEVHFKY IQAATRTGQI KEVERICRES QCYDAERVKN
FLKEAKLNDQ LPLIIVCDRH NMVHDLVLYL YRNQLQKYIE VFVQKVNAAR LPIVVGALLD
VDCSEDAIKQ LIINTRGKFD IDELVEEVEK RNRLKLLNHW LESRIQEGAT DAATHNAMAK
IYIDSNNNPE RFLKENPYYD SKVVGKYCEK RDPHYAFLSY ERGQCDAELI NVCNENSLFK
NLARYLVKRR DFTLWEQVLN EENVYRRQLI DQVVQTALSE TQDPEDISVT VKAFMAADLP
NELIELLEKI VLDNSAFSEH RNLQNLLILT AMRADRTRVM EYIQKLDNYD APDIANIAIT
SELYEEAFAI FKKFDVNSSA INVLIENVNN LDRAYEFAEK CNQSDVWASL AKAQLKQDLV
KEAVDSFIKA DDPGAYMEVV NKCSQTEHWE DLVRYLQMAR KKSRESYIET ELVYALAKTG
RLTELEEFIA GPNHAQIGQI GDRCFDNGMF DAAKILFNNV SNFAKLSVTL VRLGEYQGAV
DAARKANSTK TWKQVCFSCV ENGEFRLAQM CGLHIVVHAD ELEELINFYQ DRGHFEELIA
LLEAALGLER AHMGMFTELA ILYSKYKPEK MREHLELFWS RVNIPKVLRA AEQAHLWSEL
VFLYDKYEEY DNAALTMMQH PTESWREQHF KEVIAKVANV ELYYKAMQFY LDFKPLLLND
LLAVLSPRLD HSRTVLFFNK LKQIPLVKPY LRQVQNLNNK AINEALNQLL IDEEDHAGLR
SSIEAQDNFD NISLAQQLEK HPLVEFRRIS AYLFKGNNRW KQSIELCKKD KLYKDAMEYA
AESRNGELAE ELLSFFLDEK LYDCFAASLY HCYDLLHPDV IMELAWKHKI MDYAMPYMIQ
VMRDYQTRLE KLERSEHERK EEKAEQQQNN GMTMEPQLML TYGAPAPPMG YPGAPAGYGG
QPGYPQPGQP GFNAPGFM


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