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Coatomer subunit delta

 A0A1D8PND9_CANAL        Unreviewed;       573 AA.
A0A1D8PND9;
18-JAN-2017, integrated into UniProtKB/TrEMBL.
18-JAN-2017, sequence version 1.
22-NOV-2017, entry version 8.
SubName: Full=Coatomer subunit delta {ECO:0000313|EMBL:AOW29656.1};
Name=RET2 {ECO:0000313|CGD:CAL0000177123,
ECO:0000313|EMBL:AOW29656.1};
OrderedLocusNames=orf19.4236 {ECO:0000313|CGD:CAL0000177123};
ORFNames=CAALFM_C502300CA {ECO:0000313|EMBL:AOW29656.1};
Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
Saccharomycetes; Saccharomycetales; Debaryomycetaceae;
Candida/Lodderomyces clade; Candida.
NCBI_TaxID=237561 {ECO:0000313|EMBL:AOW29656.1, ECO:0000313|Proteomes:UP000000559};
[1] {ECO:0000313|EMBL:AOW29656.1, ECO:0000313|Proteomes:UP000000559}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SC5314 / ATCC MYA-2876 {ECO:0000313|Proteomes:UP000000559};
PubMed=15123810; DOI=10.1073/pnas.0401648101;
Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S.,
Magee B.B., Newport G., Thorstenson Y.R., Agabian N., Magee P.T.,
Davis R.W., Scherer S.;
"The diploid genome sequence of Candida albicans.";
Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
[2] {ECO:0000313|EMBL:AOW29656.1, ECO:0000313|Proteomes:UP000000559}
GENOME REANNOTATION.
STRAIN=SC5314 / ATCC MYA-2876 {ECO:0000313|Proteomes:UP000000559};
PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
Chibana H., Nantel A., Magee P.T.;
"Assembly of the Candida albicans genome into sixteen supercontigs
aligned on the eight chromosomes.";
Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
[3] {ECO:0000313|EMBL:AOW29656.1, ECO:0000313|Proteomes:UP000000559}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SC5314 / ATCC MYA-2876 {ECO:0000313|Proteomes:UP000000559};
PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
"Assembly of a phased diploid Candida albicans genome facilitates
allele-specific measurements and provides a simple model for repeat
and indel structure.";
Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
-!- SIMILARITY: Belongs to the adaptor complexes medium subunit
family. {ECO:0000256|SAAS:SAAS00882467}.
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EMBL; CP017627; AOW29656.1; -; Genomic_DNA.
RefSeq; XP_720546.2; XM_715453.2.
EnsemblFungi; AOW29656; AOW29656; CAALFM_C502300CA.
GeneID; 3637714; -.
KEGG; cal:CAALFM_C502300CA; -.
CGD; CAL0000177123; RET2.
KO; K20471; -.
Proteomes; UP000000559; Chromosome 5.
GO; GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
GO; GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IEA:InterPro.
InterPro; IPR036168; AP2_Mu_C_sf.
InterPro; IPR022775; AP_mu_sigma_su.
InterPro; IPR027059; Coatomer_dsu.
InterPro; IPR011012; Longin-like_dom_sf.
InterPro; IPR028565; MHD.
PANTHER; PTHR10121; PTHR10121; 1.
Pfam; PF00928; Adap_comp_sub; 1.
Pfam; PF01217; Clat_adaptor_s; 1.
SUPFAM; SSF49447; SSF49447; 1.
SUPFAM; SSF64356; SSF64356; 1.
PROSITE; PS51072; MHD; 1.
3: Inferred from homology;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000000559};
Protein transport {ECO:0000256|SAAS:SAAS00017283};
Reference proteome {ECO:0000313|Proteomes:UP000000559};
Transport {ECO:0000256|SAAS:SAAS00017283}.
DOMAIN 313 573 MHD. {ECO:0000259|PROSITE:PS51072}.
COILED 137 171 {ECO:0000256|SAM:Coils}.
SEQUENCE 573 AA; 62833 MW; A96D77AECC2FA50B CRC64;
MVVLSASICT RGGKALLSRQ FRDISRDRIT ALLANFPSLI SNSSGQHTSV EDENVRYVYQ
PLEEFYIVLI TNKTSNILQD IDTLHLFAST VSNLLRNIDE REIFESSFEI IDAFDEVISL
GYKENLTLTQ VQTFLEMDSH EEKIQEIIER NKELEATEER KRRAKEIQRK EMARKTMDQL
HSGASAGVGT SSFGYDSYQN NHQPTYKPTP VVETTHSAGS NTTSSSTHSL LSKPRGGGLQ
LGGKKTTAGR TLPSGNGAHE PLLATSQPVF AHKAAVESSQ TSVAAGSSGV KSGSVSRTGS
PAPSNAAATR VPNNGILITV NEKVSAQLSR DGSISSSEVK GDLQLRINQT ELANAKILLK
IAGDKKQFKT HPNVDRNLFQ SESHISVKDK SKTFPSNDQP LGVLRWRSVG KQDDTSLVPI
VFTIWVSINE EGQAQVTVEY ELTNEFVETH PNHPNVENLK ILVPVLTDNV HLQDGGNDTV
SYELYDGQGV VFNIGTIAID DPQGSFEFTV PVVDEDSLFP MQVQVDIINQ QVVESDISLG
GVSITDVVSN NDDEESLPFD LHSNISFENY VIQ


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