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Cytochrome B (DUF4405 domain-containing protein) (Oxidoreductase)

 Q1M2T7_ECOLX            Unreviewed;       199 AA.
Q1M2T7;
30-MAY-2006, integrated into UniProtKB/TrEMBL.
30-MAY-2006, sequence version 1.
18-JUL-2018, entry version 58.
SubName: Full=Cytochrome B {ECO:0000313|EMBL:ANK35150.1};
SubName: Full=DUF4405 domain-containing protein {ECO:0000313|EMBL:PNP66178.1};
SubName: Full=Oxidoreductase {ECO:0000313|EMBL:OUG29870.1};
ORFNames=AL530_025400 {ECO:0000313|EMBL:PNP66178.1},
AZZ83_002959 {ECO:0000313|EMBL:OUG29870.1},
BH694_24875 {ECO:0000313|EMBL:PCM18568.1},
CT143_24070 {ECO:0000313|EMBL:PIM26270.1},
WM48_23920 {ECO:0000313|EMBL:ANK35150.1};
Escherichia coli.
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Enterobacteriaceae; Escherichia.
NCBI_TaxID=562 {ECO:0000313|EMBL:CAK02711.1};
[1] {ECO:0000313|EMBL:CAK02711.1}
NUCLEOTIDE SEQUENCE.
PubMed=17064280; DOI=10.1111/j.1574-695X.2006.00140.x;
Sheshko V., Hejnova J., Rehakova Z., Sinkora J., Faldyna M., Alexa P.,
Felsberg J., Nemcova R., Bomba A., Sebo P.;
"HlyA knock out yields a safer Escherichia coli A0 34/86 variant with
unaffected colonization capacity in piglets.";
FEMS Immunol. Med. Microbiol. 48:257-266(2006).
[2] {ECO:0000313|EMBL:ANK35150.1, ECO:0000313|Proteomes:UP000078545}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ECONIH2 {ECO:0000313|EMBL:ANK35150.1,
ECO:0000313|Proteomes:UP000078545};
Conlan S., Thomas P.J., Mullikin J., Palmore T.N., Frank K.M.,
Segre J.A.;
"Whole genome sequencing of Escherichia coli strain ECONIH2.";
Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:PCM18568.1, ECO:0000313|Proteomes:UP000218424}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=NA643 {ECO:0000313|EMBL:PCM18568.1,
ECO:0000313|Proteomes:UP000218424};
Ranjan A., Shaik S., Nandanwar N., Hussain A., Semmler T., Jadhav S.,
Ahmed N.;
"Molecular epidemiology and comparative genomics of extraintestinal E.
coli from India.";
Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
[4] {ECO:0000313|EMBL:OUG29870.1, ECO:0000313|Proteomes:UP000194954}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=UCI121 {ECO:0000313|EMBL:OUG29870.1};
The Broad Institute Genomics Platform;
The Broad Institute Genomic Center for Infectious Diseases;
Earl A., Cerqueira G., Kirby J., Ferraro M., Onderdonk A., Delaney M.,
Kim D., Gussin G., Young S., Abouelleil A., Cao P., Chapman S.,
Cusick C., Shea T., Neafsey D., Nusbaum C., Birren B.;
"The Genome Sequence of Escherichia coli UCI121.";
Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
[5] {ECO:0000313|EMBL:PIM26270.1, ECO:0000313|Proteomes:UP000231393}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ABU 84 {ECO:0000313|EMBL:PIM26270.1,
ECO:0000313|Proteomes:UP000231393};
Stork C., Kovacs B., Trost E., Kovacs T., Schneider G., Rozsai B.,
Kerenyi M., Emody L., Dobrindt U.;
"Whole-genome draft sequences of nine asymptomatic Escherichia coli
bacteriuria isolates from diabetic patients.";
Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
[6] {ECO:0000313|EMBL:PNP66178.1, ECO:0000313|Proteomes:UP000053643}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=FDAARGOS_170 {ECO:0000313|EMBL:PNP66178.1,
ECO:0000313|Proteomes:UP000053643};
Goldberg B., Campos J., Tallon L., Sadzewicz L., Sengamalay N.,
Ott S., Godinez A., Nagaraj S., Vyas G., Aluvathingal J., Nadendla S.,
Geyer C., Sichtig H.;
"FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS):
Supporting development and validation of Infectious Disease Dx
tests.";
Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
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EMBL; CP014667; ANK35150.1; -; Genomic_DNA.
EMBL; AM261284; CAK02711.1; -; Genomic_DNA.
EMBL; NGSK01000004; OUG29870.1; -; Genomic_DNA.
EMBL; MJDL01000029; PCM18568.1; -; Genomic_DNA.
EMBL; PENR01000021; PIM26270.1; -; Genomic_DNA.
EMBL; LORS02000001; PNP66178.1; -; Genomic_DNA.
RefSeq; WP_001182766.1; NZ_PXWC01000014.1.
EnsemblBacteria; ANK35150; ANK35150; WM48_23920.
PATRIC; fig|562.10500.peg.132; -.
eggNOG; COG4117; LUCA.
Proteomes; UP000053643; Unassembled WGS sequence.
Proteomes; UP000078545; Chromosome.
Proteomes; UP000194954; Unassembled WGS sequence.
Proteomes; UP000218424; Unassembled WGS sequence.
Proteomes; UP000231393; Unassembled WGS sequence.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
GO; GO:0022904; P:respiratory electron transport chain; IEA:InterPro.
InterPro; IPR011577; Cyt_b561_bac/Ni-Hgenase.
InterPro; IPR016174; Di-haem_cyt_TM.
Pfam; PF01292; Ni_hydr_CYTB; 1.
SUPFAM; SSF81342; SSF81342; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000053643,
ECO:0000313|Proteomes:UP000078545, ECO:0000313|Proteomes:UP000194954,
ECO:0000313|Proteomes:UP000218424};
Membrane {ECO:0000256|SAM:Phobius};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius}.
TRANSMEM 12 35 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 55 80 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 125 145 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 165 188 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 10 198 Ni_hydr_CYTB. {ECO:0000259|Pfam:PF01292}.
SEQUENCE 199 AA; 22649 MW; B1F06668280D6EE1 CRC64;
MQPLPLKQIH PLWLRCCHWI NAVTVAGMIC SGWRIYNASP LFSFNYPAAL TLGGWLGGAL
LWHFALMWIL LINATIYLTL GICSGRFRSK FFPLSWTSLK KSLTQALYGK LHHTNMQEYN
MVQKVAYILI ILDGAALLLS GLVLWKPVQF SLLTILFGGY DTARYIHFLC MNIMVLFIII
HLVMVLLVPR ALLSMIRGH


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