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Cytochrome c distal, isoform B

 M9PD22_DROME            Unreviewed;       105 AA.
M9PD22;
26-JUN-2013, integrated into UniProtKB/TrEMBL.
26-JUN-2013, sequence version 1.
28-MAR-2018, entry version 41.
SubName: Full=Cytochrome c distal, isoform B {ECO:0000313|EMBL:AGB93044.1};
Name=Cyt-c-d {ECO:0000313|EMBL:AGB93044.1,
ECO:0000313|FlyBase:FBgn0086907};
Synonyms=bln {ECO:0000313|EMBL:AGB93044.1},
bs30f07.y1 {ECO:0000313|EMBL:AGB93044.1},
CYC {ECO:0000313|EMBL:AGB93044.1},
Cyt C {ECO:0000313|EMBL:AGB93044.1},
Cyt c {ECO:0000313|EMBL:AGB93044.1},
cyt c {ECO:0000313|EMBL:AGB93044.1},
cyt c-d {ECO:0000313|EMBL:AGB93044.1},
cyt-c-d {ECO:0000313|EMBL:AGB93044.1},
Cyt-c1 {ECO:0000313|EMBL:AGB93044.1},
cyt.c {ECO:0000313|EMBL:AGB93044.1},
cyt.c-d {ECO:0000313|EMBL:AGB93044.1},
CytC {ECO:0000313|EMBL:AGB93044.1},
Cytc {ECO:0000313|EMBL:AGB93044.1},
CytC-1 {ECO:0000313|EMBL:AGB93044.1},
Cytc-d {ECO:0000313|EMBL:AGB93044.1},
CytC1 {ECO:0000313|EMBL:AGB93044.1},
cytochrome c {ECO:0000313|EMBL:AGB93044.1},
DC3 {ECO:0000313|EMBL:AGB93044.1}, dc3 {ECO:0000313|EMBL:AGB93044.1},
Dmel\CG13263 {ECO:0000313|EMBL:AGB93044.1},
ms(2)04445 {ECO:0000313|EMBL:AGB93044.1},
pDMc02 {ECO:0000313|EMBL:AGB93044.1};
ORFNames=CG13263 {ECO:0000313|EMBL:AGB93044.1,
ECO:0000313|FlyBase:FBgn0086907},
Dmel_CG13263 {ECO:0000313|EMBL:AGB93044.1};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AGB93044.1, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AGB93044.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AGB93044.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[3] {ECO:0000313|EMBL:AGB93044.1, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000313|EMBL:AGB93044.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002).
[5] {ECO:0000313|EMBL:AGB93044.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[6] {ECO:0000313|EMBL:AGB93044.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[7] {ECO:0000313|EMBL:AGB93044.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[8] {ECO:0000313|EMBL:AGB93044.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
-!- FUNCTION: Electron carrier protein. The oxidized form of the
cytochrome c heme group can accept an electron from the heme group
of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c
then transfers this electron to the cytochrome oxidase complex,
the final protein carrier in the mitochondrial electron-transport
chain. {ECO:0000256|RuleBase:RU004427}.
-!- PTM: Binds 1 heme group per subunit.
{ECO:0000256|RuleBase:RU004427}.
-!- SIMILARITY: Belongs to the cytochrome c family.
{ECO:0000256|RuleBase:RU004426}.
-----------------------------------------------------------------------
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EMBL; AE014134; AGB93044.1; -; Genomic_DNA.
RefSeq; NP_001260509.1; NM_001273580.1.
RefSeq; NP_477164.1; NM_057816.5.
UniGene; Dm.13514; -.
ProteinModelPortal; M9PD22; -.
SMR; M9PD22; -.
PRIDE; M9PD22; -.
EnsemblMetazoa; FBtr0080888; FBpp0080445; FBgn0086907.
EnsemblMetazoa; FBtr0335141; FBpp0307140; FBgn0086907.
GeneID; 34995; -.
KEGG; dme:Dmel_CG13263; -.
CTD; 34995; -.
FlyBase; FBgn0086907; Cyt-c-d.
eggNOG; KOG3453; Eukaryota.
eggNOG; COG3474; LUCA.
KO; K08738; -.
OMA; RDYLHNP; -.
OrthoDB; EOG091G0UQY; -.
PhylomeDB; M9PD22; -.
ChiTaRS; Cyt-c1; fly.
GenomeRNAi; 34995; -.
Proteomes; UP000000803; Chromosome 2L.
Bgee; FBgn0086907; -.
ExpressionAtlas; M9PD22; differential.
GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-KW.
GO; GO:0070469; C:respiratory chain; IEA:UniProtKB-KW.
GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
GO; GO:0020037; F:heme binding; IEA:InterPro.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
Gene3D; 1.10.760.10; -; 1.
InterPro; IPR009056; Cyt_c-like_dom.
InterPro; IPR036909; Cyt_c-like_dom_sf.
InterPro; IPR002327; Cyt_c_1A/1B.
PANTHER; PTHR11961; PTHR11961; 1.
Pfam; PF00034; Cytochrom_C; 1.
PRINTS; PR00604; CYTCHRMECIAB.
SUPFAM; SSF46626; SSF46626; 1.
PROSITE; PS51007; CYTC; 1.
3: Inferred from homology;
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Electron transport {ECO:0000256|RuleBase:RU004427};
Heme {ECO:0000256|PROSITE-ProRule:PRU00433,
ECO:0000256|RuleBase:RU004427};
Iron {ECO:0000256|PROSITE-ProRule:PRU00433,
ECO:0000256|RuleBase:RU004427};
Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00433,
ECO:0000256|RuleBase:RU004427};
Mitochondrion {ECO:0000256|RuleBase:RU004427};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Respiratory chain {ECO:0000256|RuleBase:RU004427};
Transport {ECO:0000256|RuleBase:RU004427}.
DOMAIN 4 105 Cytochrome c.
{ECO:0000259|PROSITE:PS51007}.
SEQUENCE 105 AA; 11369 MW; 628D2ACFAE74F280 CRC64;
MGSGDAENGK KIFVQKCAQC HTYEVGGKHK VGPNLGGVVG RKCGTAAGYK YTDANIKKGV
TWTEGNLDEY LKDPKKYIPG TKMVFAGLKK AEERADLIAF LKSNK


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