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Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Fragment)

 A0A097ZLQ2_NEOPL        Unreviewed;        89 AA.
A0A097ZLQ2;
07-JAN-2015, integrated into UniProtKB/TrEMBL.
07-JAN-2015, sequence version 1.
25-OCT-2017, entry version 16.
RecName: Full=Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369};
EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};
Flags: Fragment;
Name=COI {ECO:0000313|EMBL:BAP75540.1};
Neocalanus plumchrus (Copepod) (Calanus plumchrus).
Mitochondrion {ECO:0000313|EMBL:BAP75540.1}.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Maxillopoda;
Copepoda; Calanoida; Calanidae; Neocalanus.
NCBI_TaxID=119370 {ECO:0000313|EMBL:BAP75540.1};
[1] {ECO:0000313|EMBL:BAP75540.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Np_n_1 {ECO:0000313|EMBL:BAP75510.1},
Np_n_10 {ECO:0000313|EMBL:BAP75519.1},
Np_n_11 {ECO:0000313|EMBL:BAP75520.1},
Np_n_12 {ECO:0000313|EMBL:BAP75521.1},
Np_n_13 {ECO:0000313|EMBL:BAP75522.1},
Np_n_14 {ECO:0000313|EMBL:BAP75523.1},
Np_n_15 {ECO:0000313|EMBL:BAP75524.1},
Np_n_16 {ECO:0000313|EMBL:BAP75525.1},
Np_n_17 {ECO:0000313|EMBL:BAP75526.1},
Np_n_18 {ECO:0000313|EMBL:BAP75527.1},
Np_n_19 {ECO:0000313|EMBL:BAP75528.1},
Np_n_2 {ECO:0000313|EMBL:BAP75511.1},
Np_n_20 {ECO:0000313|EMBL:BAP75529.1},
Np_n_22 {ECO:0000313|EMBL:BAP75530.1},
Np_n_24 {ECO:0000313|EMBL:BAP75531.1},
Np_n_27 {ECO:0000313|EMBL:BAP75532.1},
Np_n_28 {ECO:0000313|EMBL:BAP75533.1},
Np_n_3 {ECO:0000313|EMBL:BAP75512.1},
Np_n_30 {ECO:0000313|EMBL:BAP75535.1},
Np_n_31 {ECO:0000313|EMBL:BAP75536.1},
Np_n_32 {ECO:0000313|EMBL:BAP75537.1},
Np_n_34 {ECO:0000313|EMBL:BAP75538.1},
Np_n_35 {ECO:0000313|EMBL:BAP75539.1},
Np_n_36 {ECO:0000313|EMBL:BAP75540.1},
Np_n_38 {ECO:0000313|EMBL:BAP75541.1},
Np_n_4 {ECO:0000313|EMBL:BAP75513.1},
Np_n_43 {ECO:0000313|EMBL:BAP75543.1},
Np_n_5 {ECO:0000313|EMBL:BAP75514.1},
Np_n_6 {ECO:0000313|EMBL:BAP75515.1},
Np_n_7 {ECO:0000313|EMBL:BAP75516.1}, and
Np_n_9 {ECO:0000313|EMBL:BAP75518.1};
Fujioka H.A., Machida R.J., Tsuda A.;
"Early life history of Neocalanus plumchrus (Calanoida: Copepoda) in
the western subarctic Pacific.";
Submitted (OCT-2014) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|EMBL:BAQ95414.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Na13204 {ECO:0000313|EMBL:BAQ95427.1},
Na13308 {ECO:0000313|EMBL:BAQ95416.1},
Na16305 {ECO:0000313|EMBL:BAQ95425.1},
Na20210 {ECO:0000313|EMBL:BAQ95422.1},
Na21402 {ECO:0000313|EMBL:BAQ95415.1},
Na21403 {ECO:0000313|EMBL:BAQ95417.1},
Na21504 {ECO:0000313|EMBL:BAQ95421.1},
Na21510 {ECO:0000313|EMBL:BAQ95414.1},
Na24504 {ECO:0000313|EMBL:BAQ95426.1},
Na24602 {ECO:0000313|EMBL:BAQ95420.1}, and
Na27306 {ECO:0000313|EMBL:BAQ95423.1};
Fujioka H.A., Machida R.J., Tsuda A.;
"Early life history of Neocalanus plumchrus (Calanoida: Copepoda) in
the western subarctic Pacific.";
Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Cytochrome c oxidase is the component of the respiratory
chain that catalyzes the reduction of oxygen to water. Subunits 1-
3 form the functional core of the enzyme complex. CO I is the
catalytic subunit of the enzyme. Electrons originating in
cytochrome c are transferred via the copper A center of subunit 2
and heme A of subunit 1 to the bimetallic center formed by heme A3
and copper B. {ECO:0000256|RuleBase:RU000369}.
-!- CATALYTIC ACTIVITY: 4 ferrocytochrome c + O(2) + 4 H(+) = 4
ferricytochrome c + 2 H(2)O. {ECO:0000256|RuleBase:RU000369}.
-!- PATHWAY: Energy metabolism; oxidative phosphorylation.
{ECO:0000256|RuleBase:RU000369}.
-!- SUBCELLULAR LOCATION: Mitochondrion inner membrane
{ECO:0000256|RuleBase:RU000369}; Multi-pass membrane protein
{ECO:0000256|RuleBase:RU000369}.
-!- SIMILARITY: Belongs to the heme-copper respiratory oxidase family.
{ECO:0000256|RuleBase:RU000369}.
-----------------------------------------------------------------------
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EMBL; LC005540; BAP75510.1; -; Genomic_DNA.
EMBL; LC005541; BAP75511.1; -; Genomic_DNA.
EMBL; LC005542; BAP75512.1; -; Genomic_DNA.
EMBL; LC005543; BAP75513.1; -; Genomic_DNA.
EMBL; LC005544; BAP75514.1; -; Genomic_DNA.
EMBL; LC005545; BAP75515.1; -; Genomic_DNA.
EMBL; LC005546; BAP75516.1; -; Genomic_DNA.
EMBL; LC005548; BAP75518.1; -; Genomic_DNA.
EMBL; LC005549; BAP75519.1; -; Genomic_DNA.
EMBL; LC005550; BAP75520.1; -; Genomic_DNA.
EMBL; LC005551; BAP75521.1; -; Genomic_DNA.
EMBL; LC005552; BAP75522.1; -; Genomic_DNA.
EMBL; LC005553; BAP75523.1; -; Genomic_DNA.
EMBL; LC005554; BAP75524.1; -; Genomic_DNA.
EMBL; LC005555; BAP75525.1; -; Genomic_DNA.
EMBL; LC005556; BAP75526.1; -; Genomic_DNA.
EMBL; LC005557; BAP75527.1; -; Genomic_DNA.
EMBL; LC005558; BAP75528.1; -; Genomic_DNA.
EMBL; LC005559; BAP75529.1; -; Genomic_DNA.
EMBL; LC005560; BAP75530.1; -; Genomic_DNA.
EMBL; LC005561; BAP75531.1; -; Genomic_DNA.
EMBL; LC005562; BAP75532.1; -; Genomic_DNA.
EMBL; LC005563; BAP75533.1; -; Genomic_DNA.
EMBL; LC005565; BAP75535.1; -; Genomic_DNA.
EMBL; LC005566; BAP75536.1; -; Genomic_DNA.
EMBL; LC005567; BAP75537.1; -; Genomic_DNA.
EMBL; LC005568; BAP75538.1; -; Genomic_DNA.
EMBL; LC005569; BAP75539.1; -; Genomic_DNA.
EMBL; LC005570; BAP75540.1; -; Genomic_DNA.
EMBL; LC005571; BAP75541.1; -; Genomic_DNA.
EMBL; LC005573; BAP75543.1; -; Genomic_DNA.
EMBL; LC036331; BAQ95414.1; -; Genomic_DNA.
EMBL; LC036332; BAQ95415.1; -; Genomic_DNA.
EMBL; LC036333; BAQ95416.1; -; Genomic_DNA.
EMBL; LC036334; BAQ95417.1; -; Genomic_DNA.
EMBL; LC036337; BAQ95420.1; -; Genomic_DNA.
EMBL; LC036338; BAQ95421.1; -; Genomic_DNA.
EMBL; LC036339; BAQ95422.1; -; Genomic_DNA.
EMBL; LC036340; BAQ95423.1; -; Genomic_DNA.
EMBL; LC036342; BAQ95425.1; -; Genomic_DNA.
EMBL; LC036343; BAQ95426.1; -; Genomic_DNA.
EMBL; LC036344; BAQ95427.1; -; Genomic_DNA.
UniPathway; UPA00705; -.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO; GO:0070469; C:respiratory chain; IEA:UniProtKB-KW.
GO; GO:0004129; F:cytochrome-c oxidase activity; IEA:UniProtKB-EC.
GO; GO:0020037; F:heme binding; IEA:InterPro.
GO; GO:0005506; F:iron ion binding; IEA:InterPro.
GO; GO:0009060; P:aerobic respiration; IEA:InterPro.
GO; GO:0006119; P:oxidative phosphorylation; IEA:UniProtKB-UniPathway.
Gene3D; 1.20.210.10; -; 1.
InterPro; IPR023616; Cyt_c_oxase-like_su1_dom.
InterPro; IPR036927; Cyt_c_oxase-like_su1_sf.
InterPro; IPR000883; Cyt_C_Oxase_1.
PANTHER; PTHR10422; PTHR10422; 1.
Pfam; PF00115; COX1; 1.
PRINTS; PR01165; CYCOXIDASEI.
SUPFAM; SSF81442; SSF81442; 1.
PROSITE; PS50855; COX1; 1.
3: Inferred from homology;
Copper {ECO:0000256|RuleBase:RU000369};
Electron transport {ECO:0000256|RuleBase:RU000369};
Heme {ECO:0000256|RuleBase:RU000369};
Iron {ECO:0000256|RuleBase:RU000369};
Membrane {ECO:0000256|RuleBase:RU000369, ECO:0000256|SAM:Phobius};
Metal-binding {ECO:0000256|RuleBase:RU000369};
Mitochondrion {ECO:0000256|RuleBase:RU000369};
Mitochondrion inner membrane {ECO:0000256|RuleBase:RU000369};
Oxidoreductase {ECO:0000256|RuleBase:RU000369};
Respiratory chain {ECO:0000256|RuleBase:RU000369};
Signal {ECO:0000256|SAM:SignalP};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius};
Transport {ECO:0000256|RuleBase:RU000369}.
SIGNAL 1 37 {ECO:0000256|SAM:SignalP}.
CHAIN 38 89 Cytochrome c oxidase subunit 1.
{ECO:0000256|SAM:SignalP}.
/FTId=PRO_5010905120.
TRANSMEM 59 79 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 1 89 COX1. {ECO:0000259|PROSITE:PS50855}.
NON_TER 1 1 {ECO:0000313|EMBL:BAP75540.1}.
NON_TER 89 89 {ECO:0000313|EMBL:BAP75540.1}.
SEQUENCE 89 AA; 9293 MW; F14B0C5D0B4CF00D CRC64;
LGAADMAFPR MNNMSFWFLM PALIMLLSSS LVESGAGTGW TVYPPLSSNI AHAGGSVDFA
IFSLHLAGVS SILGAVNFIS TLGNLRVFG


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