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Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Fragment)

 A0A1C9C5N9_COCMA        Unreviewed;       370 AA.
A0A1C9C5N9;
30-NOV-2016, integrated into UniProtKB/TrEMBL.
30-NOV-2016, sequence version 1.
25-OCT-2017, entry version 6.
RecName: Full=Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369};
EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};
Flags: Fragment;
Name=COI {ECO:0000313|EMBL:AOM63600.1};
Cochliomyia macellaria (Secondary screw-worm).
Mitochondrion {ECO:0000313|EMBL:AOM63600.1}.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Oestroidea; Calliphoridae; Chrysomyinae; Cochliomyia.
NCBI_TaxID=66361 {ECO:0000313|EMBL:AOM63600.1};
[1] {ECO:0000313|EMBL:AOM63600.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CO017 {ECO:0000313|EMBL:AOM63600.1};
PubMed=27563274;
Yusseff-Vanegas S., Agnarsson I.;
"Molecular phylogeny of the forensically important genus Cochliomyia
(Diptera: Calliphoridae).";
Zookeys 609:107-120(2016).
[2] {ECO:0000313|EMBL:AOM63600.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CO017 {ECO:0000313|EMBL:AOM63600.1};
Florea S., Webb J.S., Jaromczyk J., Schardl C.L.;
Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Cytochrome c oxidase is the component of the respiratory
chain that catalyzes the reduction of oxygen to water. Subunits 1-
3 form the functional core of the enzyme complex. CO I is the
catalytic subunit of the enzyme. Electrons originating in
cytochrome c are transferred via the copper A center of subunit 2
and heme A of subunit 1 to the bimetallic center formed by heme A3
and copper B. {ECO:0000256|RuleBase:RU000369}.
-!- CATALYTIC ACTIVITY: 4 ferrocytochrome c + O(2) + 4 H(+) = 4
ferricytochrome c + 2 H(2)O. {ECO:0000256|RuleBase:RU000369}.
-!- PATHWAY: Energy metabolism; oxidative phosphorylation.
{ECO:0000256|RuleBase:RU000369}.
-!- SUBCELLULAR LOCATION: Mitochondrion inner membrane
{ECO:0000256|RuleBase:RU000369}; Multi-pass membrane protein
{ECO:0000256|RuleBase:RU000369}.
-!- SIMILARITY: Belongs to the heme-copper respiratory oxidase family.
{ECO:0000256|RuleBase:RU000369}.
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EMBL; KX529543; AOM63600.1; -; Genomic_DNA.
UniPathway; UPA00705; -.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO; GO:0045277; C:respiratory chain complex IV; IEA:InterPro.
GO; GO:0004129; F:cytochrome-c oxidase activity; IEA:UniProtKB-EC.
GO; GO:0020037; F:heme binding; IEA:InterPro.
GO; GO:0005506; F:iron ion binding; IEA:InterPro.
GO; GO:0009060; P:aerobic respiration; IEA:InterPro.
GO; GO:0006119; P:oxidative phosphorylation; IEA:UniProtKB-UniPathway.
CDD; cd01663; Cyt_c_Oxidase_I; 1.
Gene3D; 1.20.210.10; -; 1.
InterPro; IPR023616; Cyt_c_oxase-like_su1_dom.
InterPro; IPR036927; Cyt_c_oxase-like_su1_sf.
InterPro; IPR000883; Cyt_C_Oxase_1.
InterPro; IPR023615; Cyt_c_Oxase_su1_BS.
InterPro; IPR033944; Cyt_c_oxase_su1_dom.
PANTHER; PTHR10422; PTHR10422; 1.
Pfam; PF00115; COX1; 1.
PRINTS; PR01165; CYCOXIDASEI.
SUPFAM; SSF81442; SSF81442; 1.
PROSITE; PS50855; COX1; 1.
PROSITE; PS00077; COX1_CUB; 1.
3: Inferred from homology;
Copper {ECO:0000256|RuleBase:RU000369};
Electron transport {ECO:0000256|RuleBase:RU000369};
Heme {ECO:0000256|RuleBase:RU000369};
Iron {ECO:0000256|RuleBase:RU000369};
Membrane {ECO:0000256|RuleBase:RU000369,
ECO:0000256|SAAS:SAAS00711122, ECO:0000256|SAM:Phobius};
Metal-binding {ECO:0000256|RuleBase:RU000369};
Mitochondrion {ECO:0000256|RuleBase:RU000369};
Mitochondrion inner membrane {ECO:0000256|RuleBase:RU000369};
Oxidoreductase {ECO:0000256|RuleBase:RU000369,
ECO:0000313|EMBL:AOM63600.1};
Respiratory chain {ECO:0000256|RuleBase:RU000369};
Transmembrane {ECO:0000256|SAAS:SAAS00711122,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00711122,
ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|RuleBase:RU000369}.
TRANSMEM 20 43 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 64 86 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 106 131 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 143 170 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 190 211 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 232 251 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 263 285 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 297 319 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 339 360 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 1 370 COX1. {ECO:0000259|PROSITE:PS50855}.
NON_TER 1 1 {ECO:0000313|EMBL:AOM63600.1}.
NON_TER 370 370 {ECO:0000313|EMBL:AOM63600.1}.
SEQUENCE 370 AA; 40229 MW; D82C4813C2ACE04D CRC64;
LGHPGALIAD DQIYNVIVTA HAFIMIFFMV MPIMIGGFGN WLVPLMLGAP DMAFPRMNNM
SFWLLPPALT LLLVSSMVEN GAGTGWTVYP PLSSNIAHGG ASVDLAIFSL HLAGISSILG
AVNFITTVIN MRSTGITFDR MPLFVWSVVI TALLLLLSLP VLAGAITMLL TDRNLNTSFF
DPAGGGDPIL YQHLFWFFGH PEVYILILPG FGMISHIISQ ESGKKETFGS LGMIYAMLAI
GLLGFIVWAH HMFTVGMDVD TRAYFTSATM IIAVPTGIKI FSWLATLYGT QLNYSPATLW
ALGFVFLFTV GGLTGVVLAN SSIDIILHDT YYVVAHFHYV LSMGAVFAIM AGFVHWYPLF
TGLALNSKLL


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