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Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Fragment)

 D3J961_EUCVI            Unreviewed;       219 AA.
D3J961;
23-MAR-2010, integrated into UniProtKB/TrEMBL.
23-MAR-2010, sequence version 1.
25-OCT-2017, entry version 36.
RecName: Full=Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369};
EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};
Flags: Fragment;
Name=COI {ECO:0000313|EMBL:ADB80444.1};
Eucypris virens (Freshwater ostracod).
Mitochondrion {ECO:0000313|EMBL:ADB80444.1}.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Ostracoda;
Podocopa; Podocopida; Cypridocopina; Cypridoidea; Cyprididae;
Eucypris.
NCBI_TaxID=97517 {ECO:0000313|EMBL:ADB80444.1};
[1] {ECO:0000313|EMBL:ADB80444.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CC51003a {ECO:0000313|EMBL:ACZ92284.1},
CC51011a {ECO:0000313|EMBL:ACZ92291.1},
CC51018a {ECO:0000313|EMBL:ACZ92295.1},
CC51019a {ECO:0000313|EMBL:ACZ92296.1},
CC51028a {ECO:0000313|EMBL:ACZ92302.1},
CC51029a {ECO:0000313|EMBL:ACZ92303.1},
CC5413 {ECO:0000313|EMBL:ADB80614.1},
CC5414 {ECO:0000313|EMBL:ADB80615.1},
CL1274a {ECO:0000313|EMBL:ADB80740.1},
COD213 {ECO:0000313|EMBL:ADB80497.1},
COE216a {ECO:0000313|EMBL:ADB80727.1},
COE218 {ECO:0000313|EMBL:ADB80499.1},
COU198 {ECO:0000313|EMBL:ADB80485.1},
DER443 {ECO:0000313|EMBL:ADB80633.1},
DR1616 {ECO:0000313|EMBL:ADB80760.1},
FIO137 {ECO:0000313|EMBL:ADB80465.1},
GHI201 {ECO:0000313|EMBL:ADB80488.1},
KAS343 {ECO:0000313|EMBL:ADB80586.1},
KOB442 {ECO:0000313|EMBL:ADB80632.1},
KRK600 {ECO:0000313|EMBL:ADB80823.1},
LAD336 {ECO:0000313|EMBL:ADB80582.1},
LAD341 {ECO:0000313|EMBL:ADB80584.1},
LAD342 {ECO:0000313|EMBL:ADB80585.1},
LEC618 {ECO:0000313|EMBL:ADB80832.1},
LEC620 {ECO:0000313|EMBL:ADB80833.1},
MAR202 {ECO:0000313|EMBL:ADB80489.1},
MAR203 {ECO:0000313|EMBL:ADB80490.1},
MAR204 {ECO:0000313|EMBL:ADB80491.1},
ME3151 {ECO:0000313|EMBL:ADB80475.1},
MET609 {ECO:0000313|EMBL:ADB80830.1},
MET610 {ECO:0000313|EMBL:ADB80756.1},
MOS200 {ECO:0000313|EMBL:ADB80487.1},
NEW188 {ECO:0000313|EMBL:ADB80482.1},
NEW189 {ECO:0000313|EMBL:ADB80483.1},
NEW190 {ECO:0000313|EMBL:ADB80484.1},
OMI361 {ECO:0000313|EMBL:ADB80594.1},
OMI362 {ECO:0000313|EMBL:ADB80595.1},
OMI363 {ECO:0000313|EMBL:ADB80596.1},
OMI602 {ECO:0000313|EMBL:ADB80755.1},
OMI603 {ECO:0000313|EMBL:ADB80824.1},
OMI604 {ECO:0000313|EMBL:ADB80825.1},
OMI605 {ECO:0000313|EMBL:ADB80826.1},
OMI606 {ECO:0000313|EMBL:ADB80827.1},
OMI607 {ECO:0000313|EMBL:ADB80828.1},
OMI608 {ECO:0000313|EMBL:ADB80829.1},
SEA296a {ECO:0000313|EMBL:ADB80747.1},
VA484 {ECO:0000313|EMBL:ADB80444.1}, and
VA486 {ECO:0000313|EMBL:ADB80445.1};
PubMed=19863586; DOI=10.1111/j.1558-5646.2009.00872.x;
Adolfsson S., Michalakis Y., Paczesniak D., Bode S.N.S., Butlin R.K.,
Lamatsch D.K., Martins M.J.F., Schmit O., Vandekerkhove J., Jokela J.;
"EVALUATION OF ELEVATED PLOIDY AND ASEXUAL REPRODUCTION AS ALTERNATIVE
EXPLANATIONS FOR GEOGRAPHIC PARTHENOGENESIS IN EUCYPRIS VIRENS
OSTRACODS.";
Evolution 0:0-0(2009).
[2] {ECO:0000313|EMBL:ADB80444.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CC5413 {ECO:0000313|EMBL:ADB80614.1},
CC5414 {ECO:0000313|EMBL:ADB80615.1},
CL1274a {ECO:0000313|EMBL:ADB80740.1},
COD213 {ECO:0000313|EMBL:ADB80497.1},
COE216a {ECO:0000313|EMBL:ADB80727.1},
COE218 {ECO:0000313|EMBL:ADB80499.1},
COU198 {ECO:0000313|EMBL:ADB80485.1},
DER443 {ECO:0000313|EMBL:ADB80633.1},
DR1616 {ECO:0000313|EMBL:ADB80760.1},
FIO137 {ECO:0000313|EMBL:ADB80465.1},
GHI201 {ECO:0000313|EMBL:ADB80488.1},
KAS343 {ECO:0000313|EMBL:ADB80586.1},
KOB442 {ECO:0000313|EMBL:ADB80632.1},
KRK600 {ECO:0000313|EMBL:ADB80823.1},
LAD336 {ECO:0000313|EMBL:ADB80582.1},
LAD341 {ECO:0000313|EMBL:ADB80584.1},
LAD342 {ECO:0000313|EMBL:ADB80585.1},
LEC618 {ECO:0000313|EMBL:ADB80832.1},
LEC620 {ECO:0000313|EMBL:ADB80833.1},
MAR202 {ECO:0000313|EMBL:ADB80489.1},
MAR203 {ECO:0000313|EMBL:ADB80490.1},
MAR204 {ECO:0000313|EMBL:ADB80491.1},
ME3151 {ECO:0000313|EMBL:ADB80475.1},
MET609 {ECO:0000313|EMBL:ADB80830.1},
MET610 {ECO:0000313|EMBL:ADB80756.1},
MOS200 {ECO:0000313|EMBL:ADB80487.1},
NEW188 {ECO:0000313|EMBL:ADB80482.1},
NEW189 {ECO:0000313|EMBL:ADB80483.1},
NEW190 {ECO:0000313|EMBL:ADB80484.1},
OMI361 {ECO:0000313|EMBL:ADB80594.1},
OMI362 {ECO:0000313|EMBL:ADB80595.1},
OMI363 {ECO:0000313|EMBL:ADB80596.1},
OMI602 {ECO:0000313|EMBL:ADB80755.1},
OMI603 {ECO:0000313|EMBL:ADB80824.1},
OMI604 {ECO:0000313|EMBL:ADB80825.1},
OMI605 {ECO:0000313|EMBL:ADB80826.1},
OMI606 {ECO:0000313|EMBL:ADB80827.1},
OMI607 {ECO:0000313|EMBL:ADB80828.1},
OMI608 {ECO:0000313|EMBL:ADB80829.1},
SEA296a {ECO:0000313|EMBL:ADB80747.1},
VA484 {ECO:0000313|EMBL:ADB80444.1}, and
VA486 {ECO:0000313|EMBL:ADB80445.1};
PubMed=19703573; DOI=10.1016/j.ympev.2009.08.022;
Bode S.N.S., Adolfsson S., Lamatsch D.K., Martins M.J.F., Schmit O.,
Vandekerkhove J., Mezquita F., Namiotko T., Rossetti G., Schon I.,
Butlin R.K., Martens K.;
"Exceptional cryptic diversity and multiple origins of parthenogenesis
in a freshwater ostracod.";
Mol. Phylogenet. Evol. 54:542-552(2010).
[3] {ECO:0000313|EMBL:ADN03424.1}
NUCLEOTIDE SEQUENCE.
STRAIN=10_1R_SP1 {ECO:0000313|EMBL:ADN03450.1},
11_6R_AP0 {ECO:0000313|EMBL:ADN03426.1},
12_1L_SP1 {ECO:0000313|EMBL:ADN03451.1},
12_2R_SP1 {ECO:0000313|EMBL:ADN03425.1},
13_3L_SP1 {ECO:0000313|EMBL:ADN03453.1},
13_3R_AP0 {ECO:0000313|EMBL:ADN03455.1},
14_2R_SP1 {ECO:0000313|EMBL:ADN03433.1},
14_3L_AP0 {ECO:0000313|EMBL:ADN03434.1},
14_3R_SP1 {ECO:0000313|EMBL:ADN03454.1},
15_6R_AP0 {ECO:0000313|EMBL:ADN03457.1},
16_3L_AP0 {ECO:0000313|EMBL:ADN03435.1},
16_6L_AP0 {ECO:0000313|EMBL:ADN03436.1},
17_3R_AP0 {ECO:0000313|EMBL:ADN03437.1},
17_6R_AP0 {ECO:0000313|EMBL:ADN03438.1},
19_1R_SP1 {ECO:0000313|EMBL:ADN03428.1},
19_3R_AP0 {ECO:0000313|EMBL:ADN03424.1},
19_6R_AP0 {ECO:0000313|EMBL:ADN03432.1},
20_6L_AP0 {ECO:0000313|EMBL:ADN03430.1},
21_3R_AP0 {ECO:0000313|EMBL:ADN03440.1},
21_6R_AP0 {ECO:0000313|EMBL:ADN03441.1},
22_3L_AP0 {ECO:0000313|EMBL:ADN03442.1},
22_6L_AP0 {ECO:0000313|EMBL:ADN03443.1},
22_6R_SP2 {ECO:0000313|EMBL:ADN03444.1},
3_1L_SP1 {ECO:0000313|EMBL:ADN03431.1},
3_5R_SP1 {ECO:0000313|EMBL:ADN03427.1},
5_5R_SP1 {ECO:0000313|EMBL:ADN03429.1},
6_2R_SP1 {ECO:0000313|EMBL:ADN03449.1}, and
7_6R_AP0 {ECO:0000313|EMBL:ADN03445.1};
Fukova I., Schmit O.;
"Mate recognition in the geographic parthenogen Eucypris virens
(Crustacea, Ostracoda): influences of reproductive mode, ploidy level
and population sym- or allopatry.";
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Cytochrome c oxidase is the component of the respiratory
chain that catalyzes the reduction of oxygen to water. Subunits 1-
3 form the functional core of the enzyme complex. CO I is the
catalytic subunit of the enzyme. Electrons originating in
cytochrome c are transferred via the copper A center of subunit 2
and heme A of subunit 1 to the bimetallic center formed by heme A3
and copper B. {ECO:0000256|RuleBase:RU000369}.
-!- CATALYTIC ACTIVITY: 4 ferrocytochrome c + O(2) + 4 H(+) = 4
ferricytochrome c + 2 H(2)O. {ECO:0000256|RuleBase:RU000369}.
-!- PATHWAY: Energy metabolism; oxidative phosphorylation.
{ECO:0000256|RuleBase:RU000369}.
-!- SUBCELLULAR LOCATION: Mitochondrion inner membrane
{ECO:0000256|RuleBase:RU000369}; Multi-pass membrane protein
{ECO:0000256|RuleBase:RU000369}.
-!- SIMILARITY: Belongs to the heme-copper respiratory oxidase family.
{ECO:0000256|RuleBase:RU000369}.
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EMBL; GU186133; ACZ92284.1; -; Genomic_DNA.
EMBL; GU186140; ACZ92291.1; -; Genomic_DNA.
EMBL; GU186144; ACZ92295.1; -; Genomic_DNA.
EMBL; GU186145; ACZ92296.1; -; Genomic_DNA.
EMBL; GU186151; ACZ92302.1; -; Genomic_DNA.
EMBL; GU186152; ACZ92303.1; -; Genomic_DNA.
EMBL; GQ914284; ADB80444.1; -; Genomic_DNA.
EMBL; GQ914285; ADB80445.1; -; Genomic_DNA.
EMBL; GQ914305; ADB80465.1; -; Genomic_DNA.
EMBL; GQ914315; ADB80475.1; -; Genomic_DNA.
EMBL; GQ914322; ADB80482.1; -; Genomic_DNA.
EMBL; GQ914323; ADB80483.1; -; Genomic_DNA.
EMBL; GQ914324; ADB80484.1; -; Genomic_DNA.
EMBL; GQ914325; ADB80485.1; -; Genomic_DNA.
EMBL; GQ914327; ADB80487.1; -; Genomic_DNA.
EMBL; GQ914328; ADB80488.1; -; Genomic_DNA.
EMBL; GQ914329; ADB80489.1; -; Genomic_DNA.
EMBL; GQ914330; ADB80490.1; -; Genomic_DNA.
EMBL; GQ914331; ADB80491.1; -; Genomic_DNA.
EMBL; GQ914337; ADB80497.1; -; Genomic_DNA.
EMBL; GQ914339; ADB80499.1; -; Genomic_DNA.
EMBL; GQ914422; ADB80582.1; -; Genomic_DNA.
EMBL; GQ914424; ADB80584.1; -; Genomic_DNA.
EMBL; GQ914425; ADB80585.1; -; Genomic_DNA.
EMBL; GQ914426; ADB80586.1; -; Genomic_DNA.
EMBL; GQ914434; ADB80594.1; -; Genomic_DNA.
EMBL; GQ914435; ADB80595.1; -; Genomic_DNA.
EMBL; GQ914436; ADB80596.1; -; Genomic_DNA.
EMBL; GQ914454; ADB80614.1; -; Genomic_DNA.
EMBL; GQ914455; ADB80615.1; -; Genomic_DNA.
EMBL; GQ914472; ADB80632.1; -; Genomic_DNA.
EMBL; GQ914473; ADB80633.1; -; Genomic_DNA.
EMBL; GQ914567; ADB80727.1; -; Genomic_DNA.
EMBL; GQ914580; ADB80740.1; -; Genomic_DNA.
EMBL; GQ914587; ADB80747.1; -; Genomic_DNA.
EMBL; GQ914595; ADB80755.1; -; Genomic_DNA.
EMBL; GQ914596; ADB80756.1; -; Genomic_DNA.
EMBL; GQ914600; ADB80760.1; -; Genomic_DNA.
EMBL; GQ914663; ADB80823.1; -; Genomic_DNA.
EMBL; GQ914664; ADB80824.1; -; Genomic_DNA.
EMBL; GQ914665; ADB80825.1; -; Genomic_DNA.
EMBL; GQ914666; ADB80826.1; -; Genomic_DNA.
EMBL; GQ914667; ADB80827.1; -; Genomic_DNA.
EMBL; GQ914668; ADB80828.1; -; Genomic_DNA.
EMBL; GQ914669; ADB80829.1; -; Genomic_DNA.
EMBL; GQ914670; ADB80830.1; -; Genomic_DNA.
EMBL; GQ914672; ADB80832.1; -; Genomic_DNA.
EMBL; GQ914673; ADB80833.1; -; Genomic_DNA.
EMBL; HM853298; ADN03424.1; -; Genomic_DNA.
EMBL; HM853299; ADN03425.1; -; Genomic_DNA.
EMBL; HM853300; ADN03426.1; -; Genomic_DNA.
EMBL; HM853301; ADN03427.1; -; Genomic_DNA.
EMBL; HM853302; ADN03428.1; -; Genomic_DNA.
EMBL; HM853303; ADN03429.1; -; Genomic_DNA.
EMBL; HM853304; ADN03430.1; -; Genomic_DNA.
EMBL; HM853305; ADN03431.1; -; Genomic_DNA.
EMBL; HM853306; ADN03432.1; -; Genomic_DNA.
EMBL; HM853307; ADN03433.1; -; Genomic_DNA.
EMBL; HM853308; ADN03434.1; -; Genomic_DNA.
EMBL; HM853309; ADN03435.1; -; Genomic_DNA.
EMBL; HM853310; ADN03436.1; -; Genomic_DNA.
EMBL; HM853311; ADN03437.1; -; Genomic_DNA.
EMBL; HM853312; ADN03438.1; -; Genomic_DNA.
EMBL; HM853314; ADN03440.1; -; Genomic_DNA.
EMBL; HM853315; ADN03441.1; -; Genomic_DNA.
EMBL; HM853316; ADN03442.1; -; Genomic_DNA.
EMBL; HM853317; ADN03443.1; -; Genomic_DNA.
EMBL; HM853318; ADN03444.1; -; Genomic_DNA.
EMBL; HM853319; ADN03445.1; -; Genomic_DNA.
EMBL; HM853323; ADN03449.1; -; Genomic_DNA.
EMBL; HM853324; ADN03450.1; -; Genomic_DNA.
EMBL; HM853325; ADN03451.1; -; Genomic_DNA.
EMBL; HM853327; ADN03453.1; -; Genomic_DNA.
EMBL; HM853328; ADN03454.1; -; Genomic_DNA.
EMBL; HM853329; ADN03455.1; -; Genomic_DNA.
EMBL; HM853331; ADN03457.1; -; Genomic_DNA.
UniPathway; UPA00705; -.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO; GO:0070469; C:respiratory chain; IEA:UniProtKB-KW.
GO; GO:0004129; F:cytochrome-c oxidase activity; IEA:UniProtKB-EC.
GO; GO:0020037; F:heme binding; IEA:InterPro.
GO; GO:0005506; F:iron ion binding; IEA:InterPro.
GO; GO:0009060; P:aerobic respiration; IEA:InterPro.
GO; GO:0006119; P:oxidative phosphorylation; IEA:UniProtKB-UniPathway.
Gene3D; 1.20.210.10; -; 1.
InterPro; IPR023616; Cyt_c_oxase-like_su1_dom.
InterPro; IPR036927; Cyt_c_oxase-like_su1_sf.
InterPro; IPR000883; Cyt_C_Oxase_1.
PANTHER; PTHR10422; PTHR10422; 1.
Pfam; PF00115; COX1; 1.
PRINTS; PR01165; CYCOXIDASEI.
SUPFAM; SSF81442; SSF81442; 1.
PROSITE; PS50855; COX1; 1.
3: Inferred from homology;
Copper {ECO:0000256|RuleBase:RU000369};
Electron transport {ECO:0000256|RuleBase:RU000369};
Heme {ECO:0000256|RuleBase:RU000369};
Iron {ECO:0000256|RuleBase:RU000369};
Membrane {ECO:0000256|RuleBase:RU000369, ECO:0000256|SAM:Phobius};
Metal-binding {ECO:0000256|RuleBase:RU000369};
Mitochondrion {ECO:0000256|RuleBase:RU000369};
Mitochondrion inner membrane {ECO:0000256|RuleBase:RU000369};
Oxidoreductase {ECO:0000256|RuleBase:RU000369};
Respiratory chain {ECO:0000256|RuleBase:RU000369};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius};
Transport {ECO:0000256|RuleBase:RU000369}.
TRANSMEM 42 67 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 88 112 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 132 155 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 167 194 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 1 219 COX1. {ECO:0000259|PROSITE:PS50855}.
NON_TER 1 1 {ECO:0000313|EMBL:ADB80444.1}.
NON_TER 219 219 {ECO:0000313|EMBL:ADB80444.1}.
SEQUENCE 219 AA; 23510 MW; EC140E46B1483DB2 CRC64;
TLYLIFGTWA AMLGTALSVI IRAELGQPGS LIGNDQIYNT IVTAHAFIMI FFMVMPIMIG
GFGNWLVPLM LGAPDMAFPR MNNMSFWLLP PSLTLLMIGM LTESGAGTGW TVYPPLSSNI
SHSGASVDLT IFSLHLAGAS SILGAINFIT TIINMRAASM SLDRIPLFVW SVGITALLLL
LSLPVLAGAI TMLLTDRNLN TTFFDPAGGG DPILYQHLF


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EIAAB08746 COX IV-1,COX4,COX4I1,COXIV,Cytochrome c oxidase polypeptide IV,Cytochrome c oxidase subunit 4 isoform 1, mitochondrial,Cytochrome c oxidase subunit IV isoform 1,Oryctolagus cuniculus,Rabbit
EIAAB10092 COX VIb-2,Cox6b2,Cytochrome c oxidase subunit 6B2,Cytochrome c oxidase subunit VIb isoform 2,Cytochrome c oxidase subunit VIb, testis-specific isoform,Mouse,Mus musculus
EIAAB10095 Bos taurus,Bovine,COX VIb-2,COX6B2,Cytochrome c oxidase subunit 6B2,Cytochrome c oxidase subunit VIb isoform 2,Cytochrome c oxidase subunit VIb, testis-specific isoform
EIAAB10094 COX VIb-2,Cox6b2,Cytochrome c oxidase subunit 6B2,Cytochrome c oxidase subunit VIb isoform 2,Cytochrome c oxidase subunit VIb, testis-specific isoform,Rat,Rattus norvegicus


 

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