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Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Fragment)

 D5HPF3_CALVS            Unreviewed;       170 AA.
D5HPF3; A0A0H5BSB1;
15-JUN-2010, integrated into UniProtKB/TrEMBL.
15-JUN-2010, sequence version 1.
25-OCT-2017, entry version 34.
RecName: Full=Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369};
EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};
Flags: Fragment;
Name=COI {ECO:0000313|EMBL:ADE41247.1};
Callyspongia vaginalis (Branching vase sponge).
Mitochondrion {ECO:0000313|EMBL:ADE41247.1}.
Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha;
Haplosclerida; Callyspongiidae; Callyspongia.
NCBI_TaxID=178540 {ECO:0000313|EMBL:ADE41247.1};
[1] {ECO:0000313|EMBL:ADE41247.1}
NUCLEOTIDE SEQUENCE.
STRAIN=DRT575 {ECO:0000313|EMBL:ADE41438.1},
DRT577 {ECO:0000313|EMBL:ADE41439.1},
DRT585 {ECO:0000313|EMBL:ADE41440.1},
DRT588 {ECO:0000313|EMBL:ADE41437.1},
DRT606 {ECO:0000313|EMBL:ADE41448.1},
DRT616 {ECO:0000313|EMBL:ADE41452.1},
DRT618 {ECO:0000313|EMBL:ADE41453.1},
KLG409 {ECO:0000313|EMBL:ADE41303.1},
KLG411 {ECO:0000313|EMBL:ADE41305.1},
KLG412 {ECO:0000313|EMBL:ADE41306.1},
KLG413 {ECO:0000313|EMBL:ADE41307.1},
KLG414 {ECO:0000313|EMBL:ADE41308.1},
KLG416 {ECO:0000313|EMBL:ADE41310.1},
KLG419 {ECO:0000313|EMBL:ADE41313.1},
KLG422 {ECO:0000313|EMBL:ADE41316.1},
KLG423 {ECO:0000313|EMBL:ADE41317.1},
KLG424 {ECO:0000313|EMBL:ADE41318.1},
KLG425 {ECO:0000313|EMBL:ADE41319.1},
KLG435 {ECO:0000313|EMBL:ADE41321.1},
KLG436 {ECO:0000313|EMBL:ADE41322.1},
KLG437 {ECO:0000313|EMBL:ADE41323.1},
KLG440 {ECO:0000313|EMBL:ADE41325.1},
KLG441 {ECO:0000313|EMBL:ADE41326.1},
KLG444 {ECO:0000313|EMBL:ADE41328.1},
KLG446 {ECO:0000313|EMBL:ADE41330.1},
KLG448 {ECO:0000313|EMBL:ADE41331.1},
KLG449 {ECO:0000313|EMBL:ADE41332.1},
LNK158 {ECO:0000313|EMBL:ADE41340.1},
LNK385 {ECO:0000313|EMBL:ADE41349.1},
LNK388 {ECO:0000313|EMBL:ADE41350.1},
LNK389 {ECO:0000313|EMBL:ADE41351.1},
LNK392 {ECO:0000313|EMBL:ADE41365.1},
MRQ620 {ECO:0000313|EMBL:ADE41397.1},
MRQ624 {ECO:0000313|EMBL:ADE41399.1},
MRQ626 {ECO:0000313|EMBL:ADE41400.1},
MRQ628 {ECO:0000313|EMBL:ADE41401.1},
MRQ630 {ECO:0000313|EMBL:ADE41402.1},
MRQ632 {ECO:0000313|EMBL:ADE41403.1},
MRQ636 {ECO:0000313|EMBL:ADE41405.1},
MRQ644 {ECO:0000313|EMBL:ADE41408.1},
MRQ656 {ECO:0000313|EMBL:ADE41411.1},
MRQ657 {ECO:0000313|EMBL:ADE41412.1},
MRQ659 {ECO:0000313|EMBL:ADE41414.1},
MRQ660 {ECO:0000313|EMBL:ADE41415.1},
MRQ662 {ECO:0000313|EMBL:ADE41416.1},
MRQ666 {ECO:0000313|EMBL:ADE41418.1},
MRQ672 {ECO:0000313|EMBL:ADE41421.1},
MRQ674 {ECO:0000313|EMBL:ADE41422.1},
MRQ676 {ECO:0000313|EMBL:ADE41423.1},
MRQ680 {ECO:0000313|EMBL:ADE41425.1},
PTE168 {ECO:0000313|EMBL:ADE41278.1},
PTE169 {ECO:0000313|EMBL:ADE41281.1},
PTE170 {ECO:0000313|EMBL:ADE41282.1},
PTE171 {ECO:0000313|EMBL:ADE41279.1},
PTE172 {ECO:0000313|EMBL:ADE41283.1},
PTE173 {ECO:0000313|EMBL:ADE41280.1},
PTE174 {ECO:0000313|EMBL:ADE41284.1},
PTE175 {ECO:0000313|EMBL:ADE41285.1},
PTE176 {ECO:0000313|EMBL:ADE41286.1},
PTE177 {ECO:0000313|EMBL:ADE41287.1},
PTE178 {ECO:0000313|EMBL:ADE41288.1},
PTE179 {ECO:0000313|EMBL:ADE41289.1},
PTE182 {ECO:0000313|EMBL:ADE41292.1},
PTE189 {ECO:0000313|EMBL:ADE41299.1},
WPB159 {ECO:0000313|EMBL:ADE41247.1},
WPB162 {ECO:0000313|EMBL:ADE41250.1},
WPB164 {ECO:0000313|EMBL:ADE41251.1},
WPB165 {ECO:0000313|EMBL:ADE41252.1},
WPB166 {ECO:0000313|EMBL:ADE41253.1},
WPB167 {ECO:0000313|EMBL:ADE41254.1},
WPB193 {ECO:0000313|EMBL:ADE41255.1},
WPB194 {ECO:0000313|EMBL:ADE41256.1},
WPB196 {ECO:0000313|EMBL:ADE41258.1},
WPB197 {ECO:0000313|EMBL:ADE41259.1},
WPB437 {ECO:0000313|EMBL:ADE41260.1},
WPB439 {ECO:0000313|EMBL:ADE41261.1},
WPB441 {ECO:0000313|EMBL:ADE41262.1},
WPB445 {ECO:0000313|EMBL:ADE41264.1},
WPB447 {ECO:0000313|EMBL:ADE41265.1},
WPB449 {ECO:0000313|EMBL:ADE41266.1},
WPB453 {ECO:0000313|EMBL:ADE41263.1},
WPB457 {ECO:0000313|EMBL:ADE41267.1},
WPB461 {ECO:0000313|EMBL:ADE41268.1},
WPB465 {ECO:0000313|EMBL:ADE41269.1},
WPB466 {ECO:0000313|EMBL:ADE41273.1},
WPB467 {ECO:0000313|EMBL:ADE41274.1},
WPB468 {ECO:0000313|EMBL:ADE41275.1},
WPB469 {ECO:0000313|EMBL:ADE41276.1},
WPB470 {ECO:0000313|EMBL:ADE41277.1},
WPB471 {ECO:0000313|EMBL:ADE41270.1},
WPB473 {ECO:0000313|EMBL:ADE41271.1}, and
WPB475 {ECO:0000313|EMBL:ADE41272.1};
DeBiasse M.B., Richards V.P., Shivji M.S.;
"Genetic assessment of connectivity in the common reef sponge
Callyspongia vaginalis (Demospongiae: Haplosclerida) reveals high
population structure along the Florida reef tract.";
Coral Reefs 29:47-55(2010).
[2] {ECO:0000313|EMBL:CDR29485.2}
NUCLEOTIDE SEQUENCE.
STRAIN=BIM010.01 {ECO:0000313|EMBL:CDR29485.2},
BIM014.01 {ECO:0000313|EMBL:CDR29486.2},
BIM021.01 {ECO:0000313|EMBL:CDR29487.2},
BIM026.01 {ECO:0000313|EMBL:CDR29488.2},
BIM027.01 {ECO:0000313|EMBL:CDR29489.2},
BIM029.01 {ECO:0000313|EMBL:CDR29490.2},
BIM032.01 {ECO:0000313|EMBL:CDR29491.2},
BIM108.01 {ECO:0000313|EMBL:CDR29492.2},
BIM109.01 {ECO:0000313|EMBL:CDR29493.2},
BIM110.01 {ECO:0000313|EMBL:CDR29494.2},
BIM111.01 {ECO:0000313|EMBL:CDR29495.2},
GVS270.01 {ECO:0000313|EMBL:CDR29726.2}, and
GVS273.01 {ECO:0000313|EMBL:CDR29727.2};
DeBiasse M., Richards V., Shivji M., Hellberg M.;
"Phylogeography of the coral reef sponge Callyspongia vaginalis across
the Caribbean.";
Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Cytochrome c oxidase is the component of the respiratory
chain that catalyzes the reduction of oxygen to water. Subunits 1-
3 form the functional core of the enzyme complex. CO I is the
catalytic subunit of the enzyme. Electrons originating in
cytochrome c are transferred via the copper A center of subunit 2
and heme A of subunit 1 to the bimetallic center formed by heme A3
and copper B. {ECO:0000256|RuleBase:RU000369}.
-!- CATALYTIC ACTIVITY: 4 ferrocytochrome c + O(2) + 4 H(+) = 4
ferricytochrome c + 2 H(2)O. {ECO:0000256|RuleBase:RU000369}.
-!- PATHWAY: Energy metabolism; oxidative phosphorylation.
{ECO:0000256|RuleBase:RU000369}.
-!- SUBCELLULAR LOCATION: Mitochondrion inner membrane
{ECO:0000256|RuleBase:RU000369}; Multi-pass membrane protein
{ECO:0000256|RuleBase:RU000369}.
-!- SIMILARITY: Belongs to the heme-copper respiratory oxidase family.
{ECO:0000256|RuleBase:RU000369}.
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EMBL; GQ304527; ADE41247.1; -; Genomic_DNA.
EMBL; GQ304530; ADE41250.1; -; Genomic_DNA.
EMBL; GQ304531; ADE41251.1; -; Genomic_DNA.
EMBL; GQ304532; ADE41252.1; -; Genomic_DNA.
EMBL; GQ304533; ADE41253.1; -; Genomic_DNA.
EMBL; GQ304534; ADE41254.1; -; Genomic_DNA.
EMBL; GQ304535; ADE41255.1; -; Genomic_DNA.
EMBL; GQ304536; ADE41256.1; -; Genomic_DNA.
EMBL; GQ304538; ADE41258.1; -; Genomic_DNA.
EMBL; GQ304539; ADE41259.1; -; Genomic_DNA.
EMBL; GQ304540; ADE41260.1; -; Genomic_DNA.
EMBL; GQ304541; ADE41261.1; -; Genomic_DNA.
EMBL; GQ304542; ADE41262.1; -; Genomic_DNA.
EMBL; GQ304543; ADE41263.1; -; Genomic_DNA.
EMBL; GQ304544; ADE41264.1; -; Genomic_DNA.
EMBL; GQ304545; ADE41265.1; -; Genomic_DNA.
EMBL; GQ304546; ADE41266.1; -; Genomic_DNA.
EMBL; GQ304547; ADE41267.1; -; Genomic_DNA.
EMBL; GQ304548; ADE41268.1; -; Genomic_DNA.
EMBL; GQ304549; ADE41269.1; -; Genomic_DNA.
EMBL; GQ304550; ADE41270.1; -; Genomic_DNA.
EMBL; GQ304551; ADE41271.1; -; Genomic_DNA.
EMBL; GQ304552; ADE41272.1; -; Genomic_DNA.
EMBL; GQ304553; ADE41273.1; -; Genomic_DNA.
EMBL; GQ304554; ADE41274.1; -; Genomic_DNA.
EMBL; GQ304555; ADE41275.1; -; Genomic_DNA.
EMBL; GQ304556; ADE41276.1; -; Genomic_DNA.
EMBL; GQ304557; ADE41277.1; -; Genomic_DNA.
EMBL; GQ304558; ADE41278.1; -; Genomic_DNA.
EMBL; GQ304559; ADE41279.1; -; Genomic_DNA.
EMBL; GQ304560; ADE41280.1; -; Genomic_DNA.
EMBL; GQ304561; ADE41281.1; -; Genomic_DNA.
EMBL; GQ304562; ADE41282.1; -; Genomic_DNA.
EMBL; GQ304563; ADE41283.1; -; Genomic_DNA.
EMBL; GQ304564; ADE41284.1; -; Genomic_DNA.
EMBL; GQ304565; ADE41285.1; -; Genomic_DNA.
EMBL; GQ304566; ADE41286.1; -; Genomic_DNA.
EMBL; GQ304567; ADE41287.1; -; Genomic_DNA.
EMBL; GQ304568; ADE41288.1; -; Genomic_DNA.
EMBL; GQ304569; ADE41289.1; -; Genomic_DNA.
EMBL; GQ304572; ADE41292.1; -; Genomic_DNA.
EMBL; GQ304579; ADE41299.1; -; Genomic_DNA.
EMBL; GQ304583; ADE41303.1; -; Genomic_DNA.
EMBL; GQ304585; ADE41305.1; -; Genomic_DNA.
EMBL; GQ304586; ADE41306.1; -; Genomic_DNA.
EMBL; GQ304587; ADE41307.1; -; Genomic_DNA.
EMBL; GQ304588; ADE41308.1; -; Genomic_DNA.
EMBL; GQ304590; ADE41310.1; -; Genomic_DNA.
EMBL; GQ304593; ADE41313.1; -; Genomic_DNA.
EMBL; GQ304596; ADE41316.1; -; Genomic_DNA.
EMBL; GQ304597; ADE41317.1; -; Genomic_DNA.
EMBL; GQ304598; ADE41318.1; -; Genomic_DNA.
EMBL; GQ304599; ADE41319.1; -; Genomic_DNA.
EMBL; GQ304601; ADE41321.1; -; Genomic_DNA.
EMBL; GQ304602; ADE41322.1; -; Genomic_DNA.
EMBL; GQ304603; ADE41323.1; -; Genomic_DNA.
EMBL; GQ304605; ADE41325.1; -; Genomic_DNA.
EMBL; GQ304606; ADE41326.1; -; Genomic_DNA.
EMBL; GQ304608; ADE41328.1; -; Genomic_DNA.
EMBL; GQ304610; ADE41330.1; -; Genomic_DNA.
EMBL; GQ304611; ADE41331.1; -; Genomic_DNA.
EMBL; GQ304612; ADE41332.1; -; Genomic_DNA.
EMBL; GQ304620; ADE41340.1; -; Genomic_DNA.
EMBL; GQ304629; ADE41349.1; -; Genomic_DNA.
EMBL; GQ304630; ADE41350.1; -; Genomic_DNA.
EMBL; GQ304631; ADE41351.1; -; Genomic_DNA.
EMBL; GQ304645; ADE41365.1; -; Genomic_DNA.
EMBL; GQ304677; ADE41397.1; -; Genomic_DNA.
EMBL; GQ304679; ADE41399.1; -; Genomic_DNA.
EMBL; GQ304680; ADE41400.1; -; Genomic_DNA.
EMBL; GQ304681; ADE41401.1; -; Genomic_DNA.
EMBL; GQ304682; ADE41402.1; -; Genomic_DNA.
EMBL; GQ304683; ADE41403.1; -; Genomic_DNA.
EMBL; GQ304685; ADE41405.1; -; Genomic_DNA.
EMBL; GQ304688; ADE41408.1; -; Genomic_DNA.
EMBL; GQ304691; ADE41411.1; -; Genomic_DNA.
EMBL; GQ304692; ADE41412.1; -; Genomic_DNA.
EMBL; GQ304694; ADE41414.1; -; Genomic_DNA.
EMBL; GQ304695; ADE41415.1; -; Genomic_DNA.
EMBL; GQ304696; ADE41416.1; -; Genomic_DNA.
EMBL; GQ304698; ADE41418.1; -; Genomic_DNA.
EMBL; GQ304701; ADE41421.1; -; Genomic_DNA.
EMBL; GQ304702; ADE41422.1; -; Genomic_DNA.
EMBL; GQ304703; ADE41423.1; -; Genomic_DNA.
EMBL; GQ304705; ADE41425.1; -; Genomic_DNA.
EMBL; GQ304717; ADE41437.1; -; Genomic_DNA.
EMBL; GQ304718; ADE41438.1; -; Genomic_DNA.
EMBL; GQ304719; ADE41439.1; -; Genomic_DNA.
EMBL; GQ304720; ADE41440.1; -; Genomic_DNA.
EMBL; GQ304728; ADE41448.1; -; Genomic_DNA.
EMBL; GQ304732; ADE41452.1; -; Genomic_DNA.
EMBL; GQ304733; ADE41453.1; -; Genomic_DNA.
EMBL; LK026343; CDR29485.2; -; Genomic_DNA.
EMBL; LK026344; CDR29486.2; -; Genomic_DNA.
EMBL; LK026345; CDR29487.2; -; Genomic_DNA.
EMBL; LK026346; CDR29488.2; -; Genomic_DNA.
EMBL; LK026347; CDR29489.2; -; Genomic_DNA.
EMBL; LK026348; CDR29490.2; -; Genomic_DNA.
EMBL; LK026349; CDR29491.2; -; Genomic_DNA.
EMBL; LK026350; CDR29492.2; -; Genomic_DNA.
EMBL; LK026351; CDR29493.2; -; Genomic_DNA.
EMBL; LK026352; CDR29494.2; -; Genomic_DNA.
EMBL; LK026353; CDR29495.2; -; Genomic_DNA.
EMBL; LK026584; CDR29726.2; -; Genomic_DNA.
EMBL; LK026585; CDR29727.2; -; Genomic_DNA.
UniPathway; UPA00705; -.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO; GO:0070469; C:respiratory chain; IEA:UniProtKB-KW.
GO; GO:0004129; F:cytochrome-c oxidase activity; IEA:UniProtKB-EC.
GO; GO:0020037; F:heme binding; IEA:InterPro.
GO; GO:0005506; F:iron ion binding; IEA:InterPro.
GO; GO:0009060; P:aerobic respiration; IEA:InterPro.
GO; GO:0006119; P:oxidative phosphorylation; IEA:UniProtKB-UniPathway.
Gene3D; 1.20.210.10; -; 1.
InterPro; IPR023616; Cyt_c_oxase-like_su1_dom.
InterPro; IPR036927; Cyt_c_oxase-like_su1_sf.
InterPro; IPR000883; Cyt_C_Oxase_1.
PANTHER; PTHR10422; PTHR10422; 1.
Pfam; PF00115; COX1; 1.
PRINTS; PR01165; CYCOXIDASEI.
SUPFAM; SSF81442; SSF81442; 1.
PROSITE; PS50855; COX1; 1.
3: Inferred from homology;
Copper {ECO:0000256|RuleBase:RU000369};
Electron transport {ECO:0000256|RuleBase:RU000369};
Heme {ECO:0000256|RuleBase:RU000369};
Iron {ECO:0000256|RuleBase:RU000369};
Membrane {ECO:0000256|RuleBase:RU000369, ECO:0000256|SAM:Phobius};
Metal-binding {ECO:0000256|RuleBase:RU000369};
Mitochondrion {ECO:0000256|RuleBase:RU000369};
Mitochondrion inner membrane {ECO:0000256|RuleBase:RU000369};
Oxidoreductase {ECO:0000256|RuleBase:RU000369};
Respiratory chain {ECO:0000256|RuleBase:RU000369};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius};
Transport {ECO:0000256|RuleBase:RU000369}.
TRANSMEM 12 37 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 49 67 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 94 120 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 132 159 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 1 170 COX1. {ECO:0000259|PROSITE:PS50855}.
NON_TER 1 1 {ECO:0000313|EMBL:ADE41247.1}.
NON_TER 170 170 {ECO:0000313|EMBL:ADE41247.1}.
SEQUENCE 170 AA; 18551 MW; 4147429322EAF627 CRC64;
QLYNVIVTAH AFVMIFFMVM PVMIGGFGNW MVPLYIGAPD MAFPRLNNIS FWLLPPALAL
LLGSAFVEQG AGTGWTVYPP LSSIQSHSGG SVDLVIFSLH LAGISSILGA MNFITTIFNM
RSPGMTLDRM PLFVWSVLVT AFLLLLSLPV LAGAITMLLT DRNFNTTFFD


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EIAAB10094 COX VIb-2,Cox6b2,Cytochrome c oxidase subunit 6B2,Cytochrome c oxidase subunit VIb isoform 2,Cytochrome c oxidase subunit VIb, testis-specific isoform,Rat,Rattus norvegicus


 

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