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Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Fragment)

 F6KQX6_PALAG            Unreviewed;       155 AA.
F6KQX6;
27-JUL-2011, integrated into UniProtKB/TrEMBL.
27-JUL-2011, sequence version 1.
20-JUN-2018, entry version 30.
RecName: Full=Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369};
EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};
Flags: Fragment;
Name=COI {ECO:0000313|EMBL:AEF33261.1};
Palaemon argentinus (Freshwater shrimp) (Palaemonetes argentinus).
Mitochondrion {ECO:0000313|EMBL:AEF33261.1}.
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata;
Caridea; Palaemonoidea; Palaemonidae; Palaemon.
NCBI_TaxID=910319 {ECO:0000313|EMBL:AEF33261.1};
[1] {ECO:0000313|EMBL:AEF33261.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Bar_1401 {ECO:0000313|EMBL:AEF33258.1},
Bar_1402 {ECO:0000313|EMBL:AEF33259.1},
Bar_1403 {ECO:0000313|EMBL:AEF33260.1},
Bar_1404 {ECO:0000313|EMBL:AEF33261.1},
Bar_1405 {ECO:0000313|EMBL:AEF33262.1},
Bar_1406 {ECO:0000313|EMBL:AEF33263.1},
Bar_1407 {ECO:0000313|EMBL:AEF33264.1},
Cav_1201 {ECO:0000313|EMBL:AEF33280.1},
Cav_1205 {ECO:0000313|EMBL:AEF33283.1},
Cav_1207 {ECO:0000313|EMBL:AEF33285.1},
Cav_1208 {ECO:0000313|EMBL:AEF33286.1},
Cav_1209 {ECO:0000313|EMBL:AEF33287.1},
Cav_1210 {ECO:0000313|EMBL:AEF33288.1},
Cav_1211 {ECO:0000313|EMBL:AEF33289.1},
Cav_1212 {ECO:0000313|EMBL:AEF33290.1},
Cav_1213 {ECO:0000313|EMBL:AEF33291.1},
Cav_1214 {ECO:0000313|EMBL:AEF33292.1},
Cav_1215 {ECO:0000313|EMBL:AEF33293.1},
Cav_1216 {ECO:0000313|EMBL:AEF33294.1},
Cav_1217 {ECO:0000313|EMBL:AEF33295.1},
Cav_1218 {ECO:0000313|EMBL:AEF33296.1},
Cav_1219 {ECO:0000313|EMBL:AEF33297.1},
Cav_1220 {ECO:0000313|EMBL:AEF33298.1},
For_902 {ECO:0000313|EMBL:AEF33245.1},
For_905 {ECO:0000313|EMBL:AEF33247.1},
For_908 {ECO:0000313|EMBL:AEF33248.1},
For_909 {ECO:0000313|EMBL:AEF33249.1},
For_910 {ECO:0000313|EMBL:AEF33250.1},
For_912 {ECO:0000313|EMBL:AEF33251.1},
For_913 {ECO:0000313|EMBL:AEF33252.1},
For_916 {ECO:0000313|EMBL:AEF33254.1},
For_917 {ECO:0000313|EMBL:AEF33255.1},
For_919 {ECO:0000313|EMBL:AEF33257.1},
Ita_601 {ECO:0000313|EMBL:AEF33265.1},
Ita_606 {ECO:0000313|EMBL:AEF33267.1},
Ita_607 {ECO:0000313|EMBL:AEF33268.1},
Ita_614 {ECO:0000313|EMBL:AEF33270.1},
Ita_705 {ECO:0000313|EMBL:AEF33273.1},
Ita_706 {ECO:0000313|EMBL:AEF33274.1},
Ita_709 {ECO:0000313|EMBL:AEF33275.1},
Man_101 {ECO:0000313|EMBL:AEF33194.1},
Man_107 {ECO:0000313|EMBL:AEF33195.1},
Man_108 {ECO:0000313|EMBL:AEF33196.1},
Man_110 {ECO:0000313|EMBL:AEF33197.1},
Man_113 {ECO:0000313|EMBL:AEF33199.1},
Man_114 {ECO:0000313|EMBL:AEF33200.1},
Man_115 {ECO:0000313|EMBL:AEF33201.1},
Man_117 {ECO:0000313|EMBL:AEF33203.1},
Man_118 {ECO:0000313|EMBL:AEF33204.1},
Man_120 {ECO:0000313|EMBL:AEF33205.1},
Mir_221 {ECO:0000313|EMBL:AEF33174.1},
Mir_222 {ECO:0000313|EMBL:AEF33175.1},
Mir_223 {ECO:0000313|EMBL:AEF33176.1},
Mir_226 {ECO:0000313|EMBL:AEF33179.1},
Mir_228 {ECO:0000313|EMBL:AEF33181.1},
Mir_229 {ECO:0000313|EMBL:AEF33182.1},
Mir_230 {ECO:0000313|EMBL:AEF33183.1},
Mir_231 {ECO:0000313|EMBL:AEF33184.1},
Mir_232 {ECO:0000313|EMBL:AEF33185.1},
Mir_233 {ECO:0000313|EMBL:AEF33186.1},
Mir_234 {ECO:0000313|EMBL:AEF33187.1},
Mir_235 {ECO:0000313|EMBL:AEF33188.1},
Mir_236 {ECO:0000313|EMBL:AEF33189.1},
Mir_238 {ECO:0000313|EMBL:AEF33191.1},
Mir_240 {ECO:0000313|EMBL:AEF33193.1},
PaC_401 {ECO:0000313|EMBL:AEF33226.1},
PaC_402 {ECO:0000313|EMBL:AEF33227.1},
PaC_403 {ECO:0000313|EMBL:AEF33228.1},
PaC_405 {ECO:0000313|EMBL:AEF33230.1},
PaC_406 {ECO:0000313|EMBL:AEF33231.1},
PaC_407 {ECO:0000313|EMBL:AEF33232.1},
PaC_408 {ECO:0000313|EMBL:AEF33233.1},
PaC_409 {ECO:0000313|EMBL:AEF33234.1},
PaC_410 {ECO:0000313|EMBL:AEF33235.1},
PaC_413 {ECO:0000313|EMBL:AEF33237.1},
PaC_414 {ECO:0000313|EMBL:AEF33238.1},
PaC_415 {ECO:0000313|EMBL:AEF33239.1},
PaC_416 {ECO:0000313|EMBL:AEF33240.1},
PaC_418 {ECO:0000313|EMBL:AEF33242.1},
PaC_419 {ECO:0000313|EMBL:AEF33243.1},
PaS_1801 {ECO:0000313|EMBL:AEF33206.1},
PaS_1802 {ECO:0000313|EMBL:AEF33207.1},
PaS_1804 {ECO:0000313|EMBL:AEF33209.1},
PaS_1805 {ECO:0000313|EMBL:AEF33210.1},
PaS_1807 {ECO:0000313|EMBL:AEF33211.1},
PaS_1834 {ECO:0000313|EMBL:AEF33213.1},
PaS_1835 {ECO:0000313|EMBL:AEF33214.1},
PaS_1836 {ECO:0000313|EMBL:AEF33215.1},
PaS_1839 {ECO:0000313|EMBL:AEF33218.1},
PaS_1840 {ECO:0000313|EMBL:AEF33219.1},
PaS_1845 {ECO:0000313|EMBL:AEF33223.1},
PaS_1846 {ECO:0000313|EMBL:AEF33224.1}, and
PaS_1847 {ECO:0000313|EMBL:AEF33225.1};
de Souza G.O., Maeder G., Kersanach R., D'Incao F.;
"Population Structure of Palaemonetes argentinus Nobili 1901
(Decapoda, Palaemonidae) in the Coastal Region of Southern Brazil,
Resolved by mtDNA Analysis.";
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Cytochrome c oxidase is the component of the respiratory
chain that catalyzes the reduction of oxygen to water. Subunits 1-
3 form the functional core of the enzyme complex. CO I is the
catalytic subunit of the enzyme. Electrons originating in
cytochrome c are transferred via the copper A center of subunit 2
and heme A of subunit 1 to the bimetallic center formed by heme A3
and copper B. {ECO:0000256|RuleBase:RU000369}.
-!- CATALYTIC ACTIVITY: 4 ferrocytochrome c + O(2) + 4 H(+) = 4
ferricytochrome c + 2 H(2)O. {ECO:0000256|RuleBase:RU000369}.
-!- PATHWAY: Energy metabolism; oxidative phosphorylation.
{ECO:0000256|RuleBase:RU000369}.
-!- SUBCELLULAR LOCATION: Mitochondrion inner membrane
{ECO:0000256|RuleBase:RU000369}; Multi-pass membrane protein
{ECO:0000256|RuleBase:RU000369}.
-!- SIMILARITY: Belongs to the heme-copper respiratory oxidase family.
{ECO:0000256|RuleBase:RU000369}.
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EMBL; HQ587055; AEF33174.1; -; Genomic_DNA.
EMBL; HQ587056; AEF33175.1; -; Genomic_DNA.
EMBL; HQ587057; AEF33176.1; -; Genomic_DNA.
EMBL; HQ587060; AEF33179.1; -; Genomic_DNA.
EMBL; HQ587062; AEF33181.1; -; Genomic_DNA.
EMBL; HQ587063; AEF33182.1; -; Genomic_DNA.
EMBL; HQ587064; AEF33183.1; -; Genomic_DNA.
EMBL; HQ587065; AEF33184.1; -; Genomic_DNA.
EMBL; HQ587066; AEF33185.1; -; Genomic_DNA.
EMBL; HQ587067; AEF33186.1; -; Genomic_DNA.
EMBL; HQ587068; AEF33187.1; -; Genomic_DNA.
EMBL; HQ587069; AEF33188.1; -; Genomic_DNA.
EMBL; HQ587070; AEF33189.1; -; Genomic_DNA.
EMBL; HQ587072; AEF33191.1; -; Genomic_DNA.
EMBL; HQ587074; AEF33193.1; -; Genomic_DNA.
EMBL; HQ587075; AEF33194.1; -; Genomic_DNA.
EMBL; HQ587076; AEF33195.1; -; Genomic_DNA.
EMBL; HQ587077; AEF33196.1; -; Genomic_DNA.
EMBL; HQ587078; AEF33197.1; -; Genomic_DNA.
EMBL; HQ587080; AEF33199.1; -; Genomic_DNA.
EMBL; HQ587081; AEF33200.1; -; Genomic_DNA.
EMBL; HQ587082; AEF33201.1; -; Genomic_DNA.
EMBL; HQ587084; AEF33203.1; -; Genomic_DNA.
EMBL; HQ587085; AEF33204.1; -; Genomic_DNA.
EMBL; HQ587086; AEF33205.1; -; Genomic_DNA.
EMBL; HQ587087; AEF33206.1; -; Genomic_DNA.
EMBL; HQ587088; AEF33207.1; -; Genomic_DNA.
EMBL; HQ587090; AEF33209.1; -; Genomic_DNA.
EMBL; HQ587091; AEF33210.1; -; Genomic_DNA.
EMBL; HQ587092; AEF33211.1; -; Genomic_DNA.
EMBL; HQ587094; AEF33213.1; -; Genomic_DNA.
EMBL; HQ587095; AEF33214.1; -; Genomic_DNA.
EMBL; HQ587096; AEF33215.1; -; Genomic_DNA.
EMBL; HQ587099; AEF33218.1; -; Genomic_DNA.
EMBL; HQ587100; AEF33219.1; -; Genomic_DNA.
EMBL; HQ587104; AEF33223.1; -; Genomic_DNA.
EMBL; HQ587105; AEF33224.1; -; Genomic_DNA.
EMBL; HQ587106; AEF33225.1; -; Genomic_DNA.
EMBL; HQ587107; AEF33226.1; -; Genomic_DNA.
EMBL; HQ587108; AEF33227.1; -; Genomic_DNA.
EMBL; HQ587109; AEF33228.1; -; Genomic_DNA.
EMBL; HQ587111; AEF33230.1; -; Genomic_DNA.
EMBL; HQ587112; AEF33231.1; -; Genomic_DNA.
EMBL; HQ587113; AEF33232.1; -; Genomic_DNA.
EMBL; HQ587114; AEF33233.1; -; Genomic_DNA.
EMBL; HQ587115; AEF33234.1; -; Genomic_DNA.
EMBL; HQ587116; AEF33235.1; -; Genomic_DNA.
EMBL; HQ587118; AEF33237.1; -; Genomic_DNA.
EMBL; HQ587119; AEF33238.1; -; Genomic_DNA.
EMBL; HQ587120; AEF33239.1; -; Genomic_DNA.
EMBL; HQ587121; AEF33240.1; -; Genomic_DNA.
EMBL; HQ587123; AEF33242.1; -; Genomic_DNA.
EMBL; HQ587124; AEF33243.1; -; Genomic_DNA.
EMBL; HQ587126; AEF33245.1; -; Genomic_DNA.
EMBL; HQ587128; AEF33247.1; -; Genomic_DNA.
EMBL; HQ587129; AEF33248.1; -; Genomic_DNA.
EMBL; HQ587130; AEF33249.1; -; Genomic_DNA.
EMBL; HQ587131; AEF33250.1; -; Genomic_DNA.
EMBL; HQ587132; AEF33251.1; -; Genomic_DNA.
EMBL; HQ587133; AEF33252.1; -; Genomic_DNA.
EMBL; HQ587135; AEF33254.1; -; Genomic_DNA.
EMBL; HQ587136; AEF33255.1; -; Genomic_DNA.
EMBL; HQ587138; AEF33257.1; -; Genomic_DNA.
EMBL; HQ587139; AEF33258.1; -; Genomic_DNA.
EMBL; HQ587140; AEF33259.1; -; Genomic_DNA.
EMBL; HQ587141; AEF33260.1; -; Genomic_DNA.
EMBL; HQ587142; AEF33261.1; -; Genomic_DNA.
EMBL; HQ587143; AEF33262.1; -; Genomic_DNA.
EMBL; HQ587144; AEF33263.1; -; Genomic_DNA.
EMBL; HQ587145; AEF33264.1; -; Genomic_DNA.
EMBL; HQ587146; AEF33265.1; -; Genomic_DNA.
EMBL; HQ587148; AEF33267.1; -; Genomic_DNA.
EMBL; HQ587149; AEF33268.1; -; Genomic_DNA.
EMBL; HQ587151; AEF33270.1; -; Genomic_DNA.
EMBL; HQ587154; AEF33273.1; -; Genomic_DNA.
EMBL; HQ587155; AEF33274.1; -; Genomic_DNA.
EMBL; HQ587156; AEF33275.1; -; Genomic_DNA.
EMBL; HQ587161; AEF33280.1; -; Genomic_DNA.
EMBL; HQ587164; AEF33283.1; -; Genomic_DNA.
EMBL; HQ587166; AEF33285.1; -; Genomic_DNA.
EMBL; HQ587167; AEF33286.1; -; Genomic_DNA.
EMBL; HQ587168; AEF33287.1; -; Genomic_DNA.
EMBL; HQ587169; AEF33288.1; -; Genomic_DNA.
EMBL; HQ587170; AEF33289.1; -; Genomic_DNA.
EMBL; HQ587171; AEF33290.1; -; Genomic_DNA.
EMBL; HQ587172; AEF33291.1; -; Genomic_DNA.
EMBL; HQ587173; AEF33292.1; -; Genomic_DNA.
EMBL; HQ587174; AEF33293.1; -; Genomic_DNA.
EMBL; HQ587175; AEF33294.1; -; Genomic_DNA.
EMBL; HQ587176; AEF33295.1; -; Genomic_DNA.
EMBL; HQ587177; AEF33296.1; -; Genomic_DNA.
EMBL; HQ587178; AEF33297.1; -; Genomic_DNA.
EMBL; HQ587179; AEF33298.1; -; Genomic_DNA.
UniPathway; UPA00705; -.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO; GO:0070469; C:respiratory chain; IEA:UniProtKB-KW.
GO; GO:0004129; F:cytochrome-c oxidase activity; IEA:UniProtKB-EC.
GO; GO:0020037; F:heme binding; IEA:InterPro.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0009060; P:aerobic respiration; IEA:InterPro.
GO; GO:0006119; P:oxidative phosphorylation; IEA:UniProtKB-UniPathway.
Gene3D; 1.20.210.10; -; 1.
InterPro; IPR023616; Cyt_c_oxase-like_su1_dom.
InterPro; IPR036927; Cyt_c_oxase-like_su1_sf.
InterPro; IPR000883; Cyt_C_Oxase_1.
PANTHER; PTHR10422; PTHR10422; 1.
Pfam; PF00115; COX1; 1.
PRINTS; PR01165; CYCOXIDASEI.
SUPFAM; SSF81442; SSF81442; 1.
PROSITE; PS50855; COX1; 1.
3: Inferred from homology;
Copper {ECO:0000256|RuleBase:RU000369};
Electron transport {ECO:0000256|RuleBase:RU000369};
Heme {ECO:0000256|RuleBase:RU000369};
Iron {ECO:0000256|RuleBase:RU000369};
Membrane {ECO:0000256|RuleBase:RU000369, ECO:0000256|SAM:Phobius};
Metal-binding {ECO:0000256|RuleBase:RU000369};
Mitochondrion {ECO:0000256|RuleBase:RU000369};
Mitochondrion inner membrane {ECO:0000256|RuleBase:RU000369};
Oxidoreductase {ECO:0000256|RuleBase:RU000369};
Respiratory chain {ECO:0000256|RuleBase:RU000369};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius};
Transport {ECO:0000256|RuleBase:RU000369}.
TRANSMEM 6 28 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 40 62 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 74 96 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 108 134 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 1 155 COX1. {ECO:0000259|PROSITE:PS50855}.
NON_TER 1 1 {ECO:0000313|EMBL:AEF33261.1}.
NON_TER 155 155 {ECO:0000313|EMBL:AEF33261.1}.
SEQUENCE 155 AA; 17216 MW; 55F3597871110B90 CRC64;
KKESFGTLGM IYAMMAIGVL GFVVWAHHMF TVGMDVDTRA YFTSATMIIA VPTGIKIFSW
LATLHGTQFT YSPSLIWALG FIFLFTMGGL TGVVLANSSI DIILHDTYYV VAHFHYVLSM
GAVFGIFAGI AHWFPLFTGL SLKPSWLKIH FTTMF


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