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D site-binding protein (Albumin D box-binding protein) (Albumin D-element-binding protein) (D site albumin promoter-binding protein 1)

 DBP_RAT                 Reviewed;         325 AA.
P16443;
01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
01-AUG-1991, sequence version 2.
07-JUN-2017, entry version 134.
RecName: Full=D site-binding protein;
AltName: Full=Albumin D box-binding protein;
AltName: Full=Albumin D-element-binding protein;
AltName: Full=D site albumin promoter-binding protein 1;
Name=Dbp;
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116;
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND DEVELOPMENTAL STAGE.
STRAIN=Wistar; TISSUE=Liver;
PubMed=2331750; DOI=10.1016/0092-8674(90)90808-R;
Mueller C.R., Maire P., Schibler U.;
"DBP, a liver-enriched transcriptional activator, is expressed late in
ontogeny and its tissue specificity is determined
posttranscriptionally.";
Cell 61:279-291(1990).
[2]
ERRATUM, AND SEQUENCE REVISION.
PubMed=2040017;
Mueller C.R., Maire P., Schibler U.;
Cell 65:915-915(1991).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Brain;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
REVIEW.
PubMed=10508692; DOI=10.1016/S0959-437X(99)00009-X;
Brown S.A., Schibler U.;
"The ins and outs of circadian timekeeping.";
Curr. Opin. Genet. Dev. 9:588-594(1999).
[5]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-86, AND IDENTIFICATION
BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=22673903; DOI=10.1038/ncomms1871;
Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A.,
Lundby C., Olsen J.V.;
"Quantitative maps of protein phosphorylation sites across 14
different rat organs and tissues.";
Nat. Commun. 3:876-876(2012).
-!- FUNCTION: This transcriptional activator recognizes and binds to
the sequence 5'-RTTAYGTAAY-3' found in the promoter of genes such
as albumin, CYP2A4 and CYP2A5. It is not essential for circadian
rhythm generation, but modulates important clock output genes. May
be a direct target for regulation by the circadian pacemaker
component clock. May affect circadian period and sleep regulation
(By similarity). {ECO:0000250}.
-!- SUBUNIT: Binds DNA as a homodimer or a heterodimer. Can form a
heterodimer with TEF.
-!- SUBCELLULAR LOCATION: Nucleus.
-!- TISSUE SPECIFICITY: Expressed in the suprachiasmatic nuclei (SCN)
and in most peripheral tissues, with a strong circadian
rhythmicity.
-!- DEVELOPMENTAL STAGE: Expressed late in ontogeny.
{ECO:0000269|PubMed:2331750}.
-!- SIMILARITY: Belongs to the bZIP family. PAR subfamily.
{ECO:0000305}.
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EMBL; J03179; AAA41083.1; -; mRNA.
EMBL; BC087668; AAH87668.1; -; mRNA.
PIR; A34894; A34894.
RefSeq; NP_036675.1; NM_012543.3.
UniGene; Rn.11274; -.
ProteinModelPortal; P16443; -.
STRING; 10116.ENSRNOP00000028547; -.
iPTMnet; P16443; -.
PhosphoSitePlus; P16443; -.
PaxDb; P16443; -.
Ensembl; ENSRNOT00000028546; ENSRNOP00000028547; ENSRNOG00000021027.
GeneID; 24309; -.
KEGG; rno:24309; -.
UCSC; RGD:2491; rat.
CTD; 1628; -.
RGD; 2491; Dbp.
eggNOG; ENOG410KDK1; Eukaryota.
eggNOG; ENOG410YAPB; LUCA.
GeneTree; ENSGT00440000039070; -.
HOGENOM; HOG000234383; -.
HOVERGEN; HBG004983; -.
InParanoid; P16443; -.
KO; K09056; -.
OMA; YQAQHGT; -.
OrthoDB; EOG091G0EO0; -.
PhylomeDB; P16443; -.
TreeFam; TF315869; -.
PRO; PR:P16443; -.
Proteomes; UP000002494; Chromosome 1.
Bgee; ENSRNOG00000021027; -.
ExpressionAtlas; P16443; baseline and differential.
Genevisible; P16443; RN.
GO; GO:0005634; C:nucleus; IDA:RGD.
GO; GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0001077; F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding; IDA:RGD.
GO; GO:0007623; P:circadian rhythm; IEA:InterPro.
GO; GO:0001889; P:liver development; IEP:RGD.
GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:RGD.
InterPro; IPR004827; bZIP.
InterPro; IPR029830; DBP.
PANTHER; PTHR11988:SF39; PTHR11988:SF39; 1.
Pfam; PF07716; bZIP_2; 1.
SMART; SM00338; BRLZ; 1.
PROSITE; PS50217; BZIP; 1.
1: Evidence at protein level;
Activator; Biological rhythms; Complete proteome; DNA-binding;
Nucleus; Phosphoprotein; Reference proteome; Transcription;
Transcription regulation.
CHAIN 1 325 D site-binding protein.
/FTId=PRO_0000076509.
DOMAIN 255 318 bZIP. {ECO:0000255|PROSITE-
ProRule:PRU00978}.
REGION 257 279 Basic motif. {ECO:0000255|PROSITE-
ProRule:PRU00978}.
REGION 283 297 Leucine-zipper. {ECO:0000255|PROSITE-
ProRule:PRU00978}.
COMPBIAS 129 135 Poly-Pro.
COMPBIAS 156 161 Poly-Ser.
COMPBIAS 188 239 Pro-rich (proline/acidic region (PAR)).
MOD_RES 86 86 Phosphoserine.
{ECO:0000244|PubMed:22673903}.
SEQUENCE 325 AA; 34436 MW; D9B2A53FF18455B2 CRC64;
MARPLSDRTP GPLLLGGPAG APPGGGALLG LRSLLQGNSK PKEPASCLLK EKERKATLPS
APVPGPVLET AGPADAPTGA VSGGGSPRGR SGPVAGPSLF APLLWERTLP FGDVEYVDLD
AFLLEHGLPP SPPPPGGLSP APSPARTPAP SPGPGSCSSS SPRSSPGHAP ARATLGAAGG
HRAGLTSRDT PSPVDPDTVE VLMTFEPDPA DLALSSIPGH ETFDPRRHRF SEEELKPQPI
MKKARKVQVP EEQKDEKYWS RRYKNNEAAK RSRDARRLKE NQISVRAAFL EKENALLRQE
VVAVRQELSH YRAVLSRYQA QHGTL


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