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DNA (cytosine-5)-methyltransferase (EC 2.1.1.37)

 A0A1P8BCY7_ARATH        Unreviewed;      1446 AA.
A0A1P8BCY7;
12-APR-2017, integrated into UniProtKB/TrEMBL.
12-APR-2017, sequence version 1.
25-OCT-2017, entry version 7.
RecName: Full=DNA (cytosine-5)-methyltransferase {ECO:0000256|PIRNR:PIRNR037404};
EC=2.1.1.37 {ECO:0000256|PIRNR:PIRNR037404};
Name=MET1 {ECO:0000313|EMBL:ANM69463.1};
Synonyms=DDM2 {ECO:0000313|EMBL:ANM69463.1},
DECREASED DNA METHYLATION 2 {ECO:0000313|EMBL:ANM69463.1},
DMT01 {ECO:0000313|EMBL:ANM69463.1},
DMT1 {ECO:0000313|EMBL:ANM69463.1},
DNA METHYLTRANSFERASE {ECO:0000313|EMBL:ANM69463.1},
DNA METHYLTRANSFERASE 01 {ECO:0000313|EMBL:ANM69463.1},
DNA METHYLTRANSFERASE 1 {ECO:0000313|EMBL:ANM69463.1},
MET2 {ECO:0000313|EMBL:ANM69463.1},
methyltransferase 1 {ECO:0000313|EMBL:ANM69463.1},
METHYLTRANSFERASE 2 {ECO:0000313|EMBL:ANM69463.1},
METHYLTRANSFERASE I {ECO:0000313|EMBL:ANM69463.1},
METI {ECO:0000313|EMBL:ANM69463.1};
OrderedLocusNames=At5g49160 {ECO:0000313|EMBL:ANM69463.1};
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702 {ECO:0000313|EMBL:ANM69463.1, ECO:0000313|Proteomes:UP000006548};
[1] {ECO:0000313|EMBL:ANM69463.1, ECO:0000313|Proteomes:UP000006548}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
PubMed=11130714; DOI=10.1038/35048507;
Kazusa DNA Research Institute;
Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
European Union Arabidopsis Genome Sequencing Consortium;
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
Bevan M., Fransz P.;
"Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana.";
Nature 408:823-826(2000).
[2] {ECO:0000313|EMBL:ANM69463.1, ECO:0000313|Proteomes:UP000006548}
GENOME REANNOTATION.
STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
Lavstsen T., Jespersen J.S.;
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
-!- CATALYTIC ACTIVITY: S-adenosyl-L-methionine + DNA = S-adenosyl-L-
homocysteine + DNA containing 5-methylcytosine.
{ECO:0000256|PIRNR:PIRNR037404, ECO:0000256|RuleBase:RU000417}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PIRNR:PIRNR037404}.
-!- SIMILARITY: Belongs to the class I-like SAM-binding
methyltransferase superfamily. C5-methyltransferase family.
{ECO:0000256|PIRNR:PIRNR037404, ECO:0000256|PROSITE-
ProRule:PRU01016, ECO:0000256|RuleBase:RU000416}.
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EMBL; CP002688; ANM69463.1; -; Genomic_DNA.
RefSeq; NP_001331134.1; NM_001344823.1.
UniGene; At.20294; -.
SMR; A0A1P8BCY7; -.
EnsemblPlants; AT5G49160.2; AT5G49160.2; AT5G49160.
GeneID; 834975; -.
Gramene; AT5G49160.2; AT5G49160.2; AT5G49160.
Proteomes; UP000006548; Chromosome 5.
ExpressionAtlas; A0A1P8BCY7; baseline and differential.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO; GO:0003682; F:chromatin binding; IEA:UniProtKB-UniRule.
GO; GO:0003886; F:DNA (cytosine-5-)-methyltransferase activity; IEA:UniProtKB-UniRule.
GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
InterPro; IPR001025; BAH_dom.
InterPro; IPR018117; C5_DNA_meth_AS.
InterPro; IPR001525; C5_MeTfrase.
InterPro; IPR031303; C5_meth_CS.
InterPro; IPR022702; Cytosine_MeTrfase1_RFD.
InterPro; IPR017198; DNMT1-like.
InterPro; IPR029063; SAM-dependent_MTases.
Pfam; PF01426; BAH; 2.
Pfam; PF12047; DNMT1-RFD; 2.
PIRSF; PIRSF037404; DNMT1; 5.
PRINTS; PR00105; C5METTRFRASE.
SMART; SM00439; BAH; 2.
SUPFAM; SSF53335; SSF53335; 3.
TIGRFAMs; TIGR00675; dcm; 1.
PROSITE; PS51038; BAH; 2.
PROSITE; PS00094; C5_MTASE_1; 1.
PROSITE; PS00095; C5_MTASE_2; 1.
PROSITE; PS51679; SAM_MT_C5; 1.
3: Inferred from homology;
Complete proteome {ECO:0000313|Proteomes:UP000006548};
DNA-binding {ECO:0000256|PIRNR:PIRNR037404};
Methyltransferase {ECO:0000256|PIRNR:PIRNR037404, ECO:0000256|PROSITE-
ProRule:PRU01016, ECO:0000256|RuleBase:RU000417,
ECO:0000313|EMBL:ANM69463.1}; Nucleus {ECO:0000256|PIRNR:PIRNR037404};
Reference proteome {ECO:0000313|Proteomes:UP000006548};
S-adenosyl-L-methionine {ECO:0000256|PIRNR:PIRNR037404,
ECO:0000256|PROSITE-ProRule:PRU01016};
Transferase {ECO:0000256|PIRNR:PIRNR037404, ECO:0000256|PROSITE-
ProRule:PRU01016, ECO:0000256|RuleBase:RU000417,
ECO:0000313|EMBL:ANM69463.1}.
DOMAIN 647 781 BAH. {ECO:0000259|PROSITE:PS51038}.
DOMAIN 821 961 BAH. {ECO:0000259|PROSITE:PS51038}.
ACT_SITE 1110 1110 {ECO:0000256|PIRSR:PIRSR037404-1,
ECO:0000256|PROSITE-ProRule:PRU01016}.
SEQUENCE 1446 AA; 162137 MW; FE79B461F502A93C CRC64;
MVENGAKAAK RKKRPLPEIQ EVEDVPRTRR PRRAAACTSF KEKSIRVCEK SATIEVKKQQ
IVEEEFLALR LTALETDVED RPTRRLNDFV LFDSDGVPQP LEMLEIHDIF VSGAILPSDV
CTDKEKEKGV RCTSFGRVEH WSISGYEDGS PVIWISTELA DYDCRKPAAS YRKVYDYFYE
KARASVAVYK KLSKSSGGDP DIGLEELLAA VVRSMSSGSK YFSSGAAIID FVISQGDFIY
NQLAGLDETA KKHESSYVEI PVLVALREKS SKIDKPLQRE RNPSNGVRIK EVSQVAESEA
LTSDQLVDGT DDDRRYAILL QDEENRKSMQ QPRKNSSSGV VTDDNGSWIS LNDPDSGSQS
HDPDGMCIFL SQIKEWMIEF GSDDIISISI RTDVAWYRLG KPSKLYAPWW KPVLKTARVG
ISILTFLRVE SRVARLSFAD VTKRLSGLQA NDKAYISSDP LAVERYLVVH GQIILQLFAV
YPDDNVKRCP FVVGLASKLE DRHHTKWIIK KKKISLKELN LNPRAGMAPV ASKRKAMQAT
TTRLVNRIWG EFYSNYSPED PLQATAAENG EDEVEEEGGN GEEEVEEEGE NGLTEDTVPE
PVEVQKPHTP KKIRGSSGKR EIKWDGESLG KTSAGEPLYQ QALVGGEMVA VGGAVTLEVD
DPDEMPAIYF VEYMFESTDH CKMLHGRFLQ RGSMTVLGNA ANERELFLTN ECMTTQLKDI
KGVASFEIRS RPWGHQYRKK NITADKLDWA RALERKVKDL PTEYYCKSLY SPERGGFFSL
PLSDIGRSSG FCTSCKIRED EEKRSTIKLN VSKTGFFING IEYSVEDFVY VNPDSIGGLK
EGSKTSFKSG RNIGLRAYVV CQLLEIVPKE SRKADLGSFD VKVRRFYRPE DVSAEKAYAS
DIQELYFSQD TVVLPPGALE GKCEVRKKSD MPLSREYPIS DHIFFCDLFF DTSKGSLKQL
PANMKPKFST IKDDTLLRKK KGKGVESEIE SEIVKPVEPP KEIRLATLDI FAGCGGLSHG
LKKAGVSDAK WAIEYEEPAG QAFKQNHPES TVFVDNCNVI LRAIMEKGGD QDDCVSTTEA
NELAAKLTEE QKSTLPLPGQ VDFINGGPPC QGFSGMNRFN QSSWSKVQCE MILAFLSFAD
YFRPRYFLLE NVRTFVSFNK GQTFQLTLAS LLEMGYQVRF GILEAGAYGV SQSRKRAFIW
AAAPEEVLPE WPEPMHVFGV PKLKISLSQG LHYAAVRSTA LGAPFRPITV RDTIGDLPSV
ENGDSRTNKE YKEVAVSWFQ KEIRGNTIAL TDHICKAMNE LNLIRCKLIP TRPGADWHDL
PKRKVTLSDG RVEEMIPFCL PNTAERHNGW KGLYGRLDWQ GNFPTSVTDP QPMGKVGMCF
HPEQHRILTV RECARSQGFP DSYEFAGNIN HKHRQIGNAV PPPLAFALGR KLKEALHLKK
SPQHQP


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