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DNA binding protein (E2A DNA-binding protein)

 Q6RK85_ADE07            Unreviewed;       517 AA.
Q6RK85;
05-JUL-2004, integrated into UniProtKB/TrEMBL.
05-JUL-2004, sequence version 1.
25-APR-2018, entry version 72.
RecName: Full=DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_04054};
Short=DBP {ECO:0000256|HAMAP-Rule:MF_04054};
AltName: Full=Early 2A protein {ECO:0000256|HAMAP-Rule:MF_04054};
AltName: Full=Early E2A DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_04054};
Name=E2A {ECO:0000313|EMBL:AAR89964.1};
Synonyms=DBP {ECO:0000256|HAMAP-Rule:MF_04054};
Human adenovirus B serotype 7 (HAdV-7) (Human adenovirus 7).
Viruses; dsDNA viruses, no RNA stage; Adenoviridae; Mastadenovirus;
Human mastadenovirus B.
NCBI_TaxID=10519 {ECO:0000313|EMBL:AAR89964.1};
NCBI_TaxID=9606; Homo sapiens (Human).
[1] {ECO:0000313|EMBL:AAR89964.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Vaccine strain {ECO:0000313|EMBL:AAR89964.1};
Jiang X., Wang J., Huang T.;
Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|EMBL:AAT97588.1, ECO:0000313|Proteomes:UP000133920}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=16000418; DOI=10.1128/JCM.43.7.3083-3094.2005;
Purkayastha A., Su J., McGraw J., Ditty S.E., Hadfield T.L., Seto J.,
Russell K.L., Tibbetts C., Seto D.;
"Genomic and bioinformatics analyses of HAdV-4vac and HAdV-7vac, two
human adenovirus (HAdV) strains that constituted original prophylaxis
against HAdV-related acute respiratory disease, a reemerging epidemic
disease.";
J. Clin. Microbiol. 43:3083-3094(2005).
[3] {ECO:0000313|EMBL:AFV96293.1, ECO:0000313|Proteomes:UP000173062}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CQ1198 {ECO:0000313|EMBL:AFV96293.1};
Ni K., He L.L., Xu Z.F., Peng C.J., Liu E.M.;
"Mutant HAdV-7d2 Strain was Identified from Children with Severe
Respiratory Infection in Southwestern China.";
Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases.
[4] {ECO:0000313|EMBL:AFI24588.1, ECO:0000313|Proteomes:UP000169742}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=0901HZ/ShX/CHN/2009 {ECO:0000313|EMBL:AFI24588.1};
PubMed=23409258;
Tang L., An J., Yu P., Xu W.;
"Complete genome sequence of human adenovirus type 7 associated with
fatal infant pneumonia.";
Genome Announc. 1:E00182-12(2013).
[5] {ECO:0000313|EMBL:AHJ81831.1, ECO:0000313|Proteomes:UP000145850}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=HAdV B7 XZ2011-93 {ECO:0000313|EMBL:AHJ81831.1};
Tang L., Yang J., Tong J., Zhang L.;
"Genome and bioinformatic analysis of an HAdV-B7 virus in Jiangsu,
China.";
Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
[6] {ECO:0000313|EMBL:AGZ15336.1, ECO:0000313|Proteomes:UP000120913}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Human/CHN/DG01/2011/7[P7H7F7] {ECO:0000313|EMBL:AGZ15336.1};
PubMed=25482188; DOI=10.1038/srep07365;
Zhao S., Wan C., Ke C., Seto J., Dehghan S., Zou L., Zhou J.,
Cheng Z., Jing S., Zeng Z., Zhang J., Wan X., Wu X., Zhao W., Zhu L.,
Seto D., Zhang Q.;
"Re-emergent Human Adenovirus Genome Type 7d Caused an Acute
Respiratory Disease Outbreak in Southern China After a Twenty-one Year
Absence.";
Sci. Rep. 4:7365-7365(2014).
[7] {ECO:0000313|Proteomes:UP000102474, ECO:0000313|Proteomes:UP000107022, ECO:0000313|Proteomes:UP000109842}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CDC228/JM/CHN/2012 {ECO:0000313|EMBL:AIY53499.1},
H12/JM/CHN/2012 {ECO:0000313|EMBL:AIY53539.1},
H18/JM/CHN/2013 {ECO:0000313|EMBL:AIY53579.1},
JM11/JM/CHN/2013 {ECO:0000313|EMBL:AIY53619.1},
K22/JM/CHN/2013 {ECO:0000313|EMBL:AIY53459.1},
K57/JM/CHN/2012 {ECO:0000313|EMBL:AIY53419.1},
L14/XY/CHN/2012 {ECO:0000313|EMBL:AIY53659.1},
L34/XY/CHN/2012 {ECO:0000313|EMBL:AIY53379.1},
XY1/XY/CHN/2012 {ECO:0000313|EMBL:AIY53339.1}, and
XY6/XY/CHN/2013 {ECO:0000313|EMBL:AIY53299.1};
PubMed=26338697; DOI=10.1038/srep13617;
Qiu S., Li P., Liu H., Wang Y., Liu N., Li C., Li S., Li M., Jiang Z.,
Sun H., Li Y., Xie J., Yang C., Wang J., Li H., Yi S., Wu Z., Jia L.,
Wang L., Hao R., Sun Y., Huang L., Ma H., Yuan Z., Song H.;
"Whole-genome Sequencing for Tracing the Transmission Link between Two
ARD Outbreaks Caused by a Novel HAdV Serotype 7 Variant, China.";
Sci. Rep. 5:13617-13617(2015).
[8] {ECO:0000313|Proteomes:UP000099968, ECO:0000313|Proteomes:UP000138206, ECO:0000313|Proteomes:UP000143275}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Yu Z., Zhang Q., Fu N.;
"Fatal Pediatric Respiratory Infection Caused by Human Adenovirus
Genotype 7d in Guangzhou, China, 2010-2012.";
Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AMB61094.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Hubei/JZ01/2013 {ECO:0000313|EMBL:AMB61094.1};
Lu Q., Guo C., Huang D., Wo Y., Tong Y., Liu W., Cao W.;
"Outbreak of Febrile Respiratory Illness Associated with various
Adenovirus serotypes Infection in Chinese Military Training Camp: A
literature review and cases reports.";
Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
[10] {ECO:0000313|EMBL:ANP92016.1, ECO:0000313|Proteomes:UP000140963}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=19BOVLB/Volgograd/Rus/2014 {ECO:0000313|EMBL:ANP92016.1};
Yatsyshina S.B., Ageeva M.R., Pimkina E.V., Deviatkin A.A.,
Markelov M.L., Dedkov V.G., Safonova M.V.;
"Complete genome sequence of human adenovirus type 7 associated with
fatal adult pneumonia.";
Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
[11] {ECO:0000313|EMBL:ANI70152.1, ECO:0000313|Proteomes:UP000098519}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CDC 2014012.949 {ECO:0000313|EMBL:ANI70152.1};
PubMed=27191834; DOI=10.3201/eid2206.151898;
Scott M.K., Chommanard C., Lu X., Appelgate D., Grenz L.,
Schneider E., Gerber S.I., Erdman D.D., Thomas A.;
"Human Adenovirus Associated with Severe Respiratory Infection,
Oregon, USA, 2013-2014.";
Emerg. Infect. Dis. 22:1044-1051(2016).
[12] {ECO:0000313|EMBL:AIY53299.1, ECO:0000313|Proteomes:UP000110534}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=XY6/XY/CHN/2013 {ECO:0000313|EMBL:AIY53299.1};
PubMed=26663527; DOI=10.1002/mbo3.321;
Kwon Y.M., Kim S.Y., Jung K.H., Kim S.J.;
"Diversity and functional analysis of light-driven pumping rhodopsins
in marine Flavobacteria.";
MicrobiologyOpen 5:212-223(2016).
[13] {ECO:0000313|EMBL:AKQ24927.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Human/CHN/GZ6080/2010/7[P7H7F7] {ECO:0000313|EMBL:AKQ25044.1},
Human/CHN/GZ6784/2011/7[P7H7F7] {ECO:0000313|EMBL:AKQ25005.1},
Human/CHN/GZ6965/2011/7[P7H7F7] {ECO:0000313|EMBL:AKQ24966.1},
Human/CHN/GZ7015/2011/7[P7H7F7] {ECO:0000313|EMBL:AKQ24927.1},
Human/CHN/GZ7052/2011/7[P7H7F7] {ECO:0000313|EMBL:AKQ25161.1},
Human/CHN/GZ8546/2012/7[P7H7F7] {ECO:0000313|EMBL:AKQ25122.1}, and
Human/CHN/GZ8987/2012/7[P7H7F7] {ECO:0000313|EMBL:AKQ25083.1};
PubMed=27848998; DOI=.1038/srep37216;
Yu Z., Zeng Z., Zhang J., Pan Y., Chen M., Guo Y., Yu N., Chodosh J.,
Fu N., Che X., Zhang Q.;
"Fatal Community-acquired Pneumonia in Children Caused by Re-emergent
Human Adenovirus 7d Associated with Higher Severity of Illness and
Fatality Rate.";
Sci. Rep. 6:37216-37216(2016).
[14] {ECO:0000313|Proteomes:UP000119758, ECO:0000313|Proteomes:UP000160399}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Yu Z., Zhang Q., Fu N.;
"Fatal Pediatric Respiratory Infection Caused by Human Adenovirus
Genotype 7d in Guangzhou, China, 2010-2012.";
Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
[15] {ECO:0000313|EMBL:ASK85781.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Z9/WH/CHN/2015 complete genome {ECO:0000313|EMBL:ASK85781.1};
PubMed=28225804;
Yang X., Wang Q., Liang B., Wu F., Li H., Liu H., Sheng C., Ma Q.,
Yang C., Xie J., Li P., Jia L., Wang L., Du X., Qiu S., Song H.;
"An outbreak of acute respiratory disease caused by a virus associated
RNA II gene mutation strain of human adenovirus 7 in China, 2015.";
PLoS ONE 12:E0172519-E0172519(2017).
-!- FUNCTION: Plays a role in the elongation phase of viral strand
displacement replication by unwinding the template in an ATP-
independent fashion, employing its capacity to form multimers.
Also enhances the rate of initiation. Released from template upon
second strand synthesis. Assembles in complex with viral pTP,
viral pol, host NFIA and host POU2F1/OCT1 on viral origin of
replication. Covers the whole ssDNA genome during synthesis. The
complementary strand synthesis induces its relese from DNA
template. May inhibit cellular transcription mediated by the
interaction between host SRCAP and CBP. {ECO:0000256|HAMAP-
Rule:MF_04054}.
-!- SUBUNIT: Homomultimerizes on viral ssDNA bound to pTP. Forms a
initiation complex with viral polymerase, pTP and hosts NFIA and
POU2F1/OCT1. Interacts with host SRCAP. {ECO:0000256|HAMAP-
Rule:MF_04054}.
-!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000256|HAMAP-
Rule:MF_04054}. Note=Accumulates in infected cells.
{ECO:0000256|HAMAP-Rule:MF_04054}.
-!- DOMAIN: The C-terminal arm bridges DBP molecules together, thereby
creating a chain. {ECO:0000256|HAMAP-Rule:MF_04054}.
-!- SIMILARITY: Belongs to the adenoviridae E2A DNA-binding protein
family. {ECO:0000256|HAMAP-Rule:MF_04054}.
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EMBL; AY495969; AAR89964.1; -; Genomic_DNA.
EMBL; AY594256; AAT97588.1; -; Genomic_DNA.
EMBL; JF800905; AFI24588.1; -; Genomic_DNA.
EMBL; JX625134; AFV96293.1; -; Genomic_DNA.
EMBL; KC440171; AGZ15336.1; -; Genomic_DNA.
EMBL; KC857700; AHJ81831.1; -; Genomic_DNA.
EMBL; KJ019879; AIY53299.1; -; Genomic_DNA.
EMBL; KJ019880; AIY53339.1; -; Genomic_DNA.
EMBL; KJ019881; AIY53379.1; -; Genomic_DNA.
EMBL; KJ019882; AIY53419.1; -; Genomic_DNA.
EMBL; KJ019883; AIY53459.1; -; Genomic_DNA.
EMBL; KJ019884; AIY53499.1; -; Genomic_DNA.
EMBL; KJ019885; AIY53539.1; -; Genomic_DNA.
EMBL; KJ019886; AIY53579.1; -; Genomic_DNA.
EMBL; KJ019887; AIY53619.1; -; Genomic_DNA.
EMBL; KJ019888; AIY53659.1; -; Genomic_DNA.
EMBL; KP670855; AKQ24927.1; -; Genomic_DNA.
EMBL; KP670856; AKQ24966.1; -; Genomic_DNA.
EMBL; KP670857; AKQ25005.1; -; Genomic_DNA.
EMBL; KP670858; AKQ25044.1; -; Genomic_DNA.
EMBL; KP670859; AKQ25083.1; -; Genomic_DNA.
EMBL; KP670860; AKQ25122.1; -; Genomic_DNA.
EMBL; KP670861; AKQ25161.1; -; Genomic_DNA.
EMBL; KP896479; AMB61094.1; -; Genomic_DNA.
EMBL; KT963081; ANI70152.1; -; Genomic_DNA.
EMBL; KU361344; ANP92016.1; -; Genomic_DNA.
EMBL; KX897164; ASK85781.1; -; Genomic_DNA.
RefSeq; AP_000550.1; AC_000018.1.
Proteomes; UP000098519; Genome.
Proteomes; UP000099968; Genome.
Proteomes; UP000102474; Genome.
Proteomes; UP000107022; Genome.
Proteomes; UP000109842; Genome.
Proteomes; UP000110534; Genome.
Proteomes; UP000119758; Genome.
Proteomes; UP000120727; Genome.
Proteomes; UP000120913; Genome.
Proteomes; UP000133920; Genome.
Proteomes; UP000134620; Genome.
Proteomes; UP000135507; Genome.
Proteomes; UP000138206; Genome.
Proteomes; UP000140963; Genome.
Proteomes; UP000143275; Genome.
Proteomes; UP000145850; Genome.
Proteomes; UP000151122; Genome.
Proteomes; UP000155327; Genome.
Proteomes; UP000155520; Genome.
Proteomes; UP000157730; Genome.
Proteomes; UP000160399; Genome.
Proteomes; UP000169742; Genome.
Proteomes; UP000172553; Genome.
Proteomes; UP000173062; Genome.
GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
GO; GO:0019028; C:viral capsid; IEA:UniProtKB-UniRule.
GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
GO; GO:0006268; P:DNA unwinding involved in DNA replication; IEA:InterPro.
GO; GO:0045740; P:positive regulation of DNA replication; IEA:UniProtKB-UniRule.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-UniRule.
GO; GO:0039687; P:viral DNA strand displacement replication; IEA:UniProtKB-UniRule.
Gene3D; 1.10.269.10; -; 1.
Gene3D; 3.90.148.10; -; 2.
HAMAP; MF_04054; ADV_DNB2; 1.
InterPro; IPR036367; Ad_DBP_C_sf.
InterPro; IPR036368; ADBP_zn-bd_sf.
InterPro; IPR003176; Adenovirus_DNA-bd_a.
InterPro; IPR036362; Adenovirus_DNA-bd_N_sf.
InterPro; IPR005376; Adenovirus_DNA-bd_zn-bd.
InterPro; IPR037540; ADV_DNB2.
Pfam; PF02236; Viral_DNA_bi; 1.
Pfam; PF03728; Viral_DNA_Zn_bi; 2.
SUPFAM; SSF47724; SSF47724; 1.
SUPFAM; SSF57917; SSF57917; 2.
3: Inferred from homology;
Complete proteome {ECO:0000313|Proteomes:UP000120727};
DNA replication {ECO:0000256|HAMAP-Rule:MF_04054};
DNA-binding {ECO:0000256|HAMAP-Rule:MF_04054,
ECO:0000313|EMBL:AAT97588.1};
Early protein {ECO:0000256|HAMAP-Rule:MF_04054};
Host nucleus {ECO:0000256|HAMAP-Rule:MF_04054};
Host-virus interaction {ECO:0000256|HAMAP-Rule:MF_04054};
Metal-binding {ECO:0000256|HAMAP-Rule:MF_04054};
Phosphoprotein {ECO:0000256|HAMAP-Rule:MF_04054};
Reference proteome {ECO:0000313|Proteomes:UP000120727};
Viral DNA replication {ECO:0000256|HAMAP-Rule:MF_04054};
Zinc {ECO:0000256|HAMAP-Rule:MF_04054}.
DOMAIN 170 245 Viral_DNA_bi. {ECO:0000259|Pfam:PF02236}.
DOMAIN 268 366 Viral_DNA_Zn_bi.
{ECO:0000259|Pfam:PF03728}.
DOMAIN 381 475 Viral_DNA_Zn_bi.
{ECO:0000259|Pfam:PF03728}.
REGION 282 316 Flexible loop. {ECO:0000256|HAMAP-
Rule:MF_04054}.
REGION 501 517 C-terminal arm, DBP binding.
{ECO:0000256|HAMAP-Rule:MF_04054}.
METAL 269 269 Zinc 1. {ECO:0000256|HAMAP-
Rule:MF_04054}.
METAL 271 271 Zinc 1. {ECO:0000256|HAMAP-
Rule:MF_04054}.
METAL 324 324 Zinc 1. {ECO:0000256|HAMAP-
Rule:MF_04054}.
METAL 340 340 Zinc 1. {ECO:0000256|HAMAP-
Rule:MF_04054}.
METAL 382 382 Zinc 2. {ECO:0000256|HAMAP-
Rule:MF_04054}.
METAL 384 384 Zinc 2. {ECO:0000256|HAMAP-
Rule:MF_04054}.
METAL 436 436 Zinc 2. {ECO:0000256|HAMAP-
Rule:MF_04054}.
METAL 453 453 Zinc 2. {ECO:0000256|HAMAP-
Rule:MF_04054}.
MOD_RES 180 180 Phosphotyrosine; by host.
{ECO:0000256|HAMAP-Rule:MF_04054}.
SEQUENCE 517 AA; 58148 MW; 8549AEB175EC5F02 CRC64;
MASRGGNQSS DRQREHTPER GMGSASHPLP RPDRSPSQSP PPLPPKRNTY RRVGSDSSIE
SQVVLVSETS RSSLSPERSN SPPPIPPKKK PRKTKHVPLQ DIGHDSEEER EQAQLVAVGF
SYPPVRIIEK DGKRSVEKID KNDPIAKGAT SIAVRNPLSL PLVSAWEKGM EVMAVLMERY
RLDNDLRTSF KLMPEQHEQY KRICHQYVNE EHRGIPLTFS SMKTLTAMMG RFMQGLVHSY
SEIAHNSWEC TGCALWAHGC TDYEGKVKCL HGTIMIQKDH IIEMDVASEN GQRAMKENPD
RAKITQNRWG RNVVQLANND ARCCVNDANC ATNQFSSKSC GMFYTEGSKA QEAFKQYEAF
MKAVYPGITP DQARMMLIPI HCDCNHKPGC APVMGRQTCK MTPFGMANAE DLDVTTISDP
TVLASVRHPA LMVFQCCNPV YRNSRVQNAG PNCDFKISAP DLLGALQLTR KLWQDTFPEI
PVPKLVIPEF KWQNRLQFRN VSLPAGHFDS RQNPFDF


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