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DNA repair protein RAD51 homolog

 Q95Q25_CAEEL            Unreviewed;       395 AA.
Q95Q25;
01-DEC-2001, integrated into UniProtKB/TrEMBL.
01-DEC-2001, sequence version 1.
10-OCT-2018, entry version 149.
RecName: Full=DNA repair protein RAD51 homolog {ECO:0000256|RuleBase:RU364139};
Name=rad-51 {ECO:0000313|EMBL:CAB61038.2,
ECO:0000313|WormBase:Y43C5A.6a};
ORFNames=CELE_Y43C5A.6 {ECO:0000313|EMBL:CAB61038.2},
Y43C5A.6 {ECO:0000313|WormBase:Y43C5A.6a};
Caenorhabditis elegans.
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
NCBI_TaxID=6239 {ECO:0000313|EMBL:CAB61038.2, ECO:0000313|Proteomes:UP000001940};
[1] {ECO:0000313|EMBL:CAB61038.2, ECO:0000313|Proteomes:UP000001940}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Bristol N2 {ECO:0000313|EMBL:CAB61038.2,
ECO:0000313|Proteomes:UP000001940};
PubMed=9851916; DOI=https://doi.org/10.1126/science.282.5396.2012;
The C. elegans sequencing consortium;
Sulson J.E., Waterston R.;
"Genome sequence of the nematode C. elegans: a platform for
investigating biology.";
Science 282:2012-2018(1998).
-!- FUNCTION: Binds to single and double-stranded DNA and exhibits
DNA-dependent ATPase activity. Underwinds duplex DNA.
{ECO:0000256|RuleBase:RU364139}.
-!- INTERACTION:
Self; NbExp=6; IntAct=EBI-321895, EBI-321895;
P34348:rfs-1; NbExp=3; IntAct=EBI-321895, EBI-330791;
Q95017:ubc-9; NbExp=4; IntAct=EBI-321895, EBI-328938;
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU364139}.
-!- SIMILARITY: Belongs to the RecA family. RAD51 subfamily.
{ECO:0000256|RuleBase:RU364139}.
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EMBL; BX284604; CAB61038.2; -; Genomic_DNA.
RefSeq; NP_001023465.1; NM_001028294.2.
UniGene; Cel.19596; -.
ProteinModelPortal; Q95Q25; -.
SMR; Q95Q25; -.
DIP; DIP-25225N; -.
IntAct; Q95Q25; 9.
MINT; Q95Q25; -.
STRING; 6239.Y43C5A.6a; -.
PaxDb; Q95Q25; -.
EnsemblMetazoa; Y43C5A.6a; Y43C5A.6a; WBGene00004297.
GeneID; 177914; -.
KEGG; cel:CELE_Y43C5A.6; -.
UCSC; Y43C5A.6b; c. elegans.
CTD; 177914; -.
WormBase; Y43C5A.6a; CE29064; WBGene00004297; rad-51.
eggNOG; KOG1433; Eukaryota.
eggNOG; COG0468; LUCA.
GeneTree; ENSGT00890000139508; -.
HOGENOM; HOG000227426; -.
InParanoid; Q95Q25; -.
KO; K04482; -.
OMA; EDIVHIS; -.
OrthoDB; EOG091G09QY; -.
PhylomeDB; Q95Q25; -.
Reactome; R-CEL-5693616; Presynaptic phase of homologous DNA pairing and strand exchange.
Proteomes; UP000001940; Chromosome IV.
Bgee; WBGene00004297; Expressed in 5 organ(s), highest expression level in multi-cellular organism.
GO; GO:0000794; C:condensed nuclear chromosome; IDA:WormBase.
GO; GO:0043073; C:germ cell nucleus; IDA:WormBase.
GO; GO:0005654; C:nucleoplasm; IBA:GO_Central.
GO; GO:0005634; C:nucleus; IDA:WormBase.
GO; GO:0035861; C:site of double-strand break; IDA:WormBase.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO; GO:0016887; F:ATPase activity; IDA:WormBase.
GO; GO:0017151; F:DEAD/H-box RNA helicase binding; IPI:WormBase.
GO; GO:0008094; F:DNA-dependent ATPase activity; IDA:WormBase.
GO; GO:0003690; F:double-stranded DNA binding; IDA:WormBase.
GO; GO:0000400; F:four-way junction DNA binding; IBA:GO_Central.
GO; GO:0042802; F:identical protein binding; IPI:IntAct.
GO; GO:0000150; F:recombinase activity; IDA:WormBase.
GO; GO:0003697; F:single-stranded DNA binding; IBA:GO_Central.
GO; GO:0006974; P:cellular response to DNA damage stimulus; IMP:WormBase.
GO; GO:0000730; P:DNA recombinase assembly; IBA:GO_Central.
GO; GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.
GO; GO:0042771; P:intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; IGI:WormBase.
GO; GO:0010032; P:meiotic chromosome condensation; IMP:WormBase.
GO; GO:0006312; P:mitotic recombination; IBA:GO_Central.
GO; GO:1990426; P:mitotic recombination-dependent replication fork processing; IEA:InterPro.
GO; GO:0043066; P:negative regulation of apoptotic process; IMP:WormBase.
GO; GO:0007131; P:reciprocal meiotic recombination; IBA:GO_Central.
GO; GO:0010212; P:response to ionizing radiation; IBA:GO_Central.
GO; GO:0042148; P:strand invasion; IBA:GO_Central.
CDD; cd01123; Rad51_DMC1_radA; 1.
InterPro; IPR003593; AAA+_ATPase.
InterPro; IPR011941; DNA_recomb/repair_Rad51.
InterPro; IPR013632; DNA_recomb/repair_Rad51_C.
InterPro; IPR016467; DNA_recomb/repair_RecA-like.
InterPro; IPR010995; DNA_repair_Rad51/TF_NusA_a-hlx.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR033925; Rad51_DMC1_RadA.
InterPro; IPR020588; RecA_ATP-bd.
InterPro; IPR020587; RecA_monomer-monomer_interface.
Pfam; PF08423; Rad51; 1.
PIRSF; PIRSF005856; Rad51; 1.
SMART; SM00382; AAA; 1.
SUPFAM; SSF47794; SSF47794; 1.
SUPFAM; SSF52540; SSF52540; 1.
TIGRFAMs; TIGR02239; recomb_RAD51; 1.
PROSITE; PS50162; RECA_2; 1.
PROSITE; PS50163; RECA_3; 1.
1: Evidence at protein level;
ATP-binding {ECO:0000256|RuleBase:RU003422};
Complete proteome {ECO:0000313|Proteomes:UP000001940};
DNA damage {ECO:0000256|RuleBase:RU364139};
DNA recombination {ECO:0000256|RuleBase:RU364139};
DNA repair {ECO:0000256|RuleBase:RU364139};
DNA-binding {ECO:0000256|RuleBase:RU364139};
Nucleotide-binding {ECO:0000256|RuleBase:RU003422};
Nucleus {ECO:0000256|RuleBase:RU364139};
Proteomics identification {ECO:0000213|EPD:Q95Q25,
ECO:0000213|PeptideAtlas:Q95Q25};
Reference proteome {ECO:0000313|Proteomes:UP000001940}.
DOMAIN 152 323 RECA_2. {ECO:0000259|PROSITE:PS50162}.
DOMAIN 331 394 RECA_3. {ECO:0000259|PROSITE:PS50163}.
SEQUENCE 395 AA; 43625 MW; E844516B0C1A6AF8 CRC64;
MGQSWGYEGI AKRSLCTHKW LYNLNLHSIN LFLPIESKMS AQASRQKKSD QEQRAADQAL
LNAAIEDNAM EQDENFTVID KLESSGISSG DISKLKEAGY YTYESLAFTT RRELRNVKGI
SDQKAEKIMK EAMKFVQMGF TTGAEVHVKR SQLVQIRTGS ASLDRLLGGG IETGSITEVY
GEYRTGKTQL CHSLAVLCQL PIDMGGGEGK CMYIDTNATF RPERIIAIAQ RYNMDSAHVL
ENIAVARAYN SEHLMALIIR AGAMMSESRY AVVIVDCATA HFRNEYTGRG DLAERQMKLS
AFLKCLAKLA DEYGVAVIIT NQVVAQVDGG ASMFQADAKK PIGGHIIAHM STTRLYLRKG
KGENRVAKMV QSPNLPEAEA TYSITNHGIE DARED


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