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DNA replication and repair protein RecF (Fragment)

 H6V6M5_CHLTH            Unreviewed;       365 AA.
H6V6M5;
18-APR-2012, integrated into UniProtKB/TrEMBL.
18-APR-2012, sequence version 1.
20-JUN-2018, entry version 43.
RecName: Full=DNA replication and repair protein RecF {ECO:0000256|RuleBase:RU000578, ECO:0000256|SAAS:SAAS00930555};
Flags: Fragment;
Name=recF {ECO:0000313|EMBL:CPR49570.1};
Synonyms=recF_1 {ECO:0000313|EMBL:CQB85394.1};
ORFNames=ERS015772_00132 {ECO:0000313|EMBL:CPR49570.1},
ERS177788_00546 {ECO:0000313|EMBL:CQB85394.1};
Chlamydia trachomatis.
Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae;
Chlamydia/Chlamydophila group; Chlamydia.
NCBI_TaxID=813 {ECO:0000313|EMBL:AFA51509.1};
[1] {ECO:0000313|EMBL:AFA51509.1}
NUCLEOTIDE SEQUENCE.
STRAIN=D2s {ECO:0000313|EMBL:AFA51509.1},
D83s {ECO:0000313|EMBL:AFA51518.1},
D84s {ECO:0000313|EMBL:AFA51517.1}, and
F38nl {ECO:0000313|EMBL:AFA51515.1};
PubMed=22123249; DOI=10.1128/JB.06268-11;
Srinivasan T., Bruno W.J., Wan R., Yen A., Duong J., Dean D.;
"In vitro recombinants of antibiotic-resistant Chlamydia trachomatis
strains have statistically more breakpoints than clinical recombinants
for the same sequenced loci and exhibit selection at unexpected
loci.";
J. Bacteriol. 194:617-626(2012).
[2] {ECO:0000313|EMBL:CPR49570.1, ECO:0000313|Proteomes:UP000038595, ECO:0000313|Proteomes:UP000045537}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SwabB1 {ECO:0000313|EMBL:CQB85394.1,
ECO:0000313|Proteomes:UP000038595}, and
SwabB8 {ECO:0000313|EMBL:CPR49570.1,
ECO:0000313|Proteomes:UP000045537};
Murphy D.;
Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: The RecF protein is involved in DNA metabolism; it is
required for DNA replication and normal SOS inducibility. RecF
binds preferentially to single-stranded, linear DNA. It also seems
to bind ATP. {ECO:0000256|RuleBase:RU000578}.
-!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU000578,
ECO:0000256|SAAS:SAAS00930558}.
-!- SIMILARITY: Belongs to the RecF family.
{ECO:0000256|RuleBase:RU000578, ECO:0000256|SAAS:SAAS00930556}.
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EMBL; JN795254; AFA51509.1; -; Genomic_DNA.
EMBL; JN795260; AFA51515.1; -; Genomic_DNA.
EMBL; JN795262; AFA51517.1; -; Genomic_DNA.
EMBL; JN795263; AFA51518.1; -; Genomic_DNA.
EMBL; CSTN01000001; CPR49570.1; -; Genomic_DNA.
EMBL; CTBL01000008; CQB85394.1; -; Genomic_DNA.
RefSeq; WP_009872361.1; NZ_CSTK01000001.1.
EnsemblBacteria; CPR49570; CPR49570; ERS015772_00132.
EnsemblBacteria; CQB85394; CQB85394; ERS177788_00546.
GeneID; 35554372; -.
PATRIC; fig|813.31.peg.82; -.
eggNOG; ENOG4105C3X; Bacteria.
eggNOG; COG1195; LUCA.
Proteomes; UP000038595; Unassembled WGS sequence.
Proteomes; UP000045537; Unassembled WGS sequence.
GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO; GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
GO; GO:0009432; P:SOS response; IEA:UniProtKB-KW.
HAMAP; MF_00365; RecF; 1.
InterPro; IPR001238; DNA-binding_RecF.
InterPro; IPR018078; DNA-binding_RecF_CS.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR003395; RecF/RecN/SMC_N.
PANTHER; PTHR32182:SF0; PTHR32182:SF0; 1.
Pfam; PF02463; SMC_N; 1.
SUPFAM; SSF52540; SSF52540; 1.
TIGRFAMs; TIGR00611; recf; 1.
PROSITE; PS00617; RECF_1; 1.
PROSITE; PS00618; RECF_2; 1.
3: Inferred from homology;
ATP-binding {ECO:0000256|RuleBase:RU000578,
ECO:0000256|SAAS:SAAS00930557};
Complete proteome {ECO:0000313|Proteomes:UP000038595,
ECO:0000313|Proteomes:UP000045537};
Cytoplasm {ECO:0000256|SAAS:SAAS00930531};
DNA damage {ECO:0000256|RuleBase:RU000578};
DNA repair {ECO:0000256|RuleBase:RU000578};
DNA replication {ECO:0000256|RuleBase:RU000578,
ECO:0000256|SAAS:SAAS00930553};
DNA-binding {ECO:0000256|RuleBase:RU000578,
ECO:0000256|SAAS:SAAS00930554};
Nucleotide-binding {ECO:0000256|RuleBase:RU000578,
ECO:0000256|SAAS:SAAS00930557};
SOS response {ECO:0000256|RuleBase:RU000578}.
DOMAIN 5 334 SMC_N. {ECO:0000259|Pfam:PF02463}.
NON_TER 365 365 {ECO:0000313|EMBL:AFA51509.1}.
SEQUENCE 365 AA; 41245 MW; 12A65C89A107C71F CRC64;
MRVLSLFLKD FRNYTDLRLE LGPEMNSIFG LNAQGKTNLL EALYILSLGR SFRTSRLTDA
IRFGASHFFI EAVFSHKEVF HTLSIQVDKK GKKILFDGAP ITKLSELVGL FPVILFSIKD
IAIIEGSPSE RRRFLDLLLA QASDKYTQHI SLYHKALDQR NASIKAQNQK AISAWNSPLI
AYGSLVAFLR NECTKKLNTI FQTLWDNTLK ETLSLRYESS LITEESPTLN DIASNYYEQL
RIANTKDLDL GYTMVGPHRD ELLLTINDLP VAKFSSEGQK HSLLAVLRFA ECVYLQEEFC
IHPILCMDDI HACLDQQRLD QLLQLSNSLG QVVTTSTICP DHRSTTSCIF HVTQAQVSLV
APQSL


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