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DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) (Fragment)

 H6V6S1_CHLTH            Unreviewed;       836 AA.
H6V6S1;
18-APR-2012, integrated into UniProtKB/TrEMBL.
18-APR-2012, sequence version 1.
12-SEP-2018, entry version 47.
RecName: Full=DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS01062856};
EC=5.99.1.3 {ECO:0000256|SAAS:SAAS01062856};
Flags: Fragment;
Name=gyrA_1 {ECO:0000313|EMBL:CPR59252.1};
ORFNames=ERS015770_00113 {ECO:0000313|EMBL:CPR59252.1},
ERS177788_00133 {ECO:0000313|EMBL:CQB84994.1};
Chlamydia trachomatis.
Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae;
Chlamydia/Chlamydophila group; Chlamydia.
NCBI_TaxID=813 {ECO:0000313|EMBL:AFA51478.1};
[1] {ECO:0000313|EMBL:AFA51478.1}
NUCLEOTIDE SEQUENCE.
STRAIN=D2s {ECO:0000313|EMBL:AFA51477.1},
D83s {ECO:0000313|EMBL:AFA51478.1},
D84s {ECO:0000313|EMBL:AFA51479.1},
Ja26s {ECO:0000313|EMBL:AFA51484.1}, and
Ja47nl {ECO:0000313|EMBL:AFA51482.1};
PubMed=22123249; DOI=10.1128/JB.06268-11;
Srinivasan T., Bruno W.J., Wan R., Yen A., Duong J., Dean D.;
"In vitro recombinants of antibiotic-resistant Chlamydia trachomatis
strains have statistically more breakpoints than clinical recombinants
for the same sequenced loci and exhibit selection at unexpected
loci.";
J. Bacteriol. 194:617-626(2012).
[2] {ECO:0000313|EMBL:CPR59252.1, ECO:0000313|Proteomes:UP000038595, ECO:0000313|Proteomes:UP000044845}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SwabB1 {ECO:0000313|EMBL:CQB84994.1,
ECO:0000313|Proteomes:UP000038595}, and
SwabB4 {ECO:0000313|EMBL:CPR59252.1,
ECO:0000313|Proteomes:UP000044845};
Murphy D.;
Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
-!- CATALYTIC ACTIVITY: ATP-dependent breakage, passage and rejoining
of double-stranded DNA. {ECO:0000256|SAAS:SAAS01062859}.
-!- SIMILARITY: Belongs to the type II topoisomerase GyrA/ParC subunit
family. {ECO:0000256|SAAS:SAAS01062860}.
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EMBL; JN795363; AFA51477.1; -; Genomic_DNA.
EMBL; JN795364; AFA51478.1; -; Genomic_DNA.
EMBL; JN795365; AFA51479.1; -; Genomic_DNA.
EMBL; JN795368; AFA51482.1; -; Genomic_DNA.
EMBL; JN795370; AFA51484.1; -; Genomic_DNA.
EMBL; CSTQ01000003; CPR59252.1; -; Genomic_DNA.
EMBL; CTBL01000001; CQB84994.1; -; Genomic_DNA.
RefSeq; WP_009872445.1; NZ_CVNT01000001.1.
EnsemblBacteria; CPR59252; CPR59252; ERS015770_00113.
EnsemblBacteria; CQB84994; CQB84994; ERS177788_00133.
GeneID; 35554987; -.
PATRIC; fig|813.31.peg.210; -.
eggNOG; ENOG4105C24; Bacteria.
eggNOG; COG0188; LUCA.
Proteomes; UP000038595; Unassembled WGS sequence.
Proteomes; UP000044845; Unassembled WGS sequence.
GO; GO:0005694; C:chromosome; IEA:InterPro.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO; GO:0003918; F:DNA topoisomerase type II (ATP-hydrolyzing) activity; IEA:UniProtKB-EC.
GO; GO:0006265; P:DNA topological change; IEA:InterPro.
CDD; cd00187; TOP4c; 1.
Gene3D; 1.10.268.10; -; 1.
Gene3D; 2.120.10.90; -; 1.
Gene3D; 3.90.199.10; -; 3.
HAMAP; MF_01897; GyrA; 1.
InterPro; IPR005743; GyrA.
InterPro; IPR006691; GyrA/parC_rep.
InterPro; IPR035516; Gyrase/topoIV_suA_C.
InterPro; IPR013760; Topo_IIA-like_dom_sf.
InterPro; IPR002205; Topo_IIA_A/C.
InterPro; IPR013758; Topo_IIA_A/C_ab.
InterPro; IPR013757; Topo_IIA_A_a_sf.
Pfam; PF03989; DNA_gyraseA_C; 6.
Pfam; PF00521; DNA_topoisoIV; 1.
SMART; SM00434; TOP4c; 1.
SUPFAM; SSF101904; SSF101904; 1.
SUPFAM; SSF56719; SSF56719; 1.
3: Inferred from homology;
ATP-binding {ECO:0000256|SAAS:SAAS01062880};
Complete proteome {ECO:0000313|Proteomes:UP000038595,
ECO:0000313|Proteomes:UP000044845};
DNA-binding {ECO:0000256|SAAS:SAAS01062879};
Isomerase {ECO:0000256|SAAS:SAAS01062873};
Nucleotide-binding {ECO:0000256|SAAS:SAAS01062880};
Topoisomerase {ECO:0000256|SAAS:SAAS01062873}.
DOMAIN 11 465 TOP4c. {ECO:0000259|SMART:SM00434}.
NON_TER 836 836 {ECO:0000313|EMBL:AFA51478.1}.
SEQUENCE 836 AA; 94166 MW; 7C85FA6536136B46 CRC64;
MLNKEEIIVP KNLEEEMKES YLRYSMSVII SRALPDARDG LKPSQRRILY AMKQLNLTPG
AKHRKCAKIC GDTSGDYHPH GESVIYPTLV RMAQDWAMRY PLVDGQGNFG SIDGDPAAAM
RYTEARLTQS AIFLLEDLDK DTVDMVPNYD ETKYEPVVFP SKFPNLLCNG SSGIAVGMAT
NIPPHNLGEL IEAALLVLAN SQTSIEDILE VMPGPDFPTG GIICGTEGIR STYYTGRGKL
RLRARMHVEE NSDKQRENII LTEMPYNVNK SRLIEQIAEL INEKTLTGIS DVRDESDKDG
IRVVLELKKG ESSEVVINRL YKFTDVQVTF GANMLALDKN LPRTMNIHRM ISAWIRHRMD
VIRRRTRYEL NKAEARAHIL EGFLKALSCM DEVVKTIRES SNKEHAKQQL VELFSFSEAQ
ALAILELRLY QLTGLEADKV QKEYSELLEK ITYYRKVLAE EELVKDIIRE ELQELHKVHK
TPRRTRIEMD AGDVRDIEDI ISDESVIITI SGDDYVKRMP VKVFREQKRG GQGVTGFDMK
KGSDFLKAVY SASTKDYLLI FTNFGQCYWL KVWQLPEGER RAKGKPIINF LEGIRPGEQV
AAVLNVKRFE QGEYLFLATK KGVVKKVSLD AFGSPRKKGI RALEIDDGDE LIAARHIAND
EEKVMLFTRL GMAVRFPHDK VRPMGRAARG VRGVSLKNEQ DFVVSCQVVT EDQSVLVVCD
NGFGKRSLVC DFRETNRGSV GVRSIVINQR NGDVLGAISV TDCDSILLMS AQGQAIRINM
QDVRVMGRAT QGVRLVNLRE GDTLVAMEKL SINTESVETE ENLAASVQSG QDTIEE


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