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DSec61alpha (LD29847p) (Sec61 alpha subunit, isoform A) (Sec61 alpha subunit, isoform B)

 Q8STG9_DROME            Unreviewed;       476 AA.
Q8STG9; Q9VMD1;
01-JUN-2002, integrated into UniProtKB/TrEMBL.
01-JUN-2002, sequence version 1.
22-NOV-2017, entry version 137.
SubName: Full=DSec61alpha {ECO:0000313|EMBL:BAB78518.1};
SubName: Full=LD29847p {ECO:0000313|EMBL:AAL39714.1};
SubName: Full=Sec61 alpha subunit, isoform A {ECO:0000313|EMBL:AAF52389.2};
SubName: Full=Sec61 alpha subunit, isoform B {ECO:0000313|EMBL:AHN54189.1};
Name=Sec61alpha {ECO:0000313|EMBL:AAF52389.2,
ECO:0000313|FlyBase:FBgn0086357};
Synonyms=0455 {ECO:0000313|EMBL:AAF52389.2},
anon-WO0118547.195 {ECO:0000313|EMBL:AAF52389.2},
anon-WO0118547.277 {ECO:0000313|EMBL:AAF52389.2},
BcDNA:LD29847 {ECO:0000313|EMBL:AAF52389.2},
BEST:LD29847 {ECO:0000313|EMBL:AAF52389.2},
Dmel\CG9539 {ECO:0000313|EMBL:AAF52389.2},
dSEC61A {ECO:0000313|EMBL:AAF52389.2},
DSec61alpha {ECO:0000313|EMBL:AAF52389.2},
dSec61alpha {ECO:0000313|EMBL:AAF52389.2},
E(br)165 {ECO:0000313|EMBL:AAF52389.2},
endd2 {ECO:0000313|EMBL:AAF52389.2},
l(2)k04917 {ECO:0000313|EMBL:AAF52389.2},
LD29847 {ECO:0000313|EMBL:AAF52389.2},
Sec61 {ECO:0000313|EMBL:AAF52389.2},
sec61 {ECO:0000313|EMBL:AAF52389.2},
SEC61-alpha {ECO:0000313|EMBL:AAF52389.2},
Sec61-alpha {ECO:0000313|EMBL:AAF52389.2,
ECO:0000313|FlyBase:FBgn0086357},
Sec61a {ECO:0000313|EMBL:AAF52389.2},
SEC61ALPHA {ECO:0000313|EMBL:AAF52389.2},
sec61alpha {ECO:0000313|EMBL:AAF52389.2};
ORFNames=CG9539 {ECO:0000313|EMBL:AAF52389.2,
ECO:0000313|FlyBase:FBgn0086357},
Dmel_CG9539 {ECO:0000313|EMBL:AAF52389.2};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAL39714.1};
[1] {ECO:0000313|EMBL:AAF52389.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AAL39714.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Berkeley {ECO:0000313|EMBL:AAL39714.1};
Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J.,
Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R.,
Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J.,
Nunoo J., Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K.,
Yu C., Lewis S.E., Rubin G.M., Celniker S.;
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:AAF52389.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[4] {ECO:0000313|EMBL:AAF52389.2, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[5] {ECO:0000313|EMBL:AAF52389.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002).
[6] {ECO:0000313|EMBL:AAF52389.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[7] {ECO:0000313|EMBL:BAB78518.1}
NUCLEOTIDE SEQUENCE.
PubMed=16243437; DOI=10.1016/j.bbagen.2005.06.020;
Kanuka H., Hiratou T., Igaki T., Kanda H., Kuranaga E., Sawamoto K.,
Aigaki T., Okano H., Miura M.;
"Gain-of-function screen identifies a role of the Sec61alpha
translocon in Drosophila postmitotic neurotoxicity.";
Biochim. Biophys. Acta 1726:225-237(2005).
[8] {ECO:0000313|EMBL:AAF52389.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[9] {ECO:0000313|EMBL:AAF52389.2}
NUCLEOTIDE SEQUENCE.
Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
Svirskas R., Rubin G.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[10] {ECO:0000313|EMBL:AAF52389.2}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
[11] {ECO:0000313|EMBL:AAF52389.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[12] {ECO:0000313|EMBL:AAF52389.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[13] {ECO:0000313|EMBL:AAF52389.2}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU003484};
Multi-pass membrane protein {ECO:0000256|RuleBase:RU003484}.
-!- SIMILARITY: Belongs to the SecY/SEC61-alpha family.
{ECO:0000256|RuleBase:RU004349}.
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EMBL; AE014134; AAF52389.2; -; Genomic_DNA.
EMBL; AY069569; AAL39714.1; -; mRNA.
EMBL; AE014134; AHN54189.1; -; Genomic_DNA.
EMBL; AB062670; BAB78518.1; -; mRNA.
RefSeq; NP_001285674.1; NM_001298745.1.
RefSeq; NP_609034.1; NM_135190.5.
UniGene; Dm.7725; -.
MINT; MINT-831121; -.
STRING; 7227.FBpp0078896; -.
EnsemblMetazoa; FBtr0079266; FBpp0078896; FBgn0086357.
EnsemblMetazoa; FBtr0345753; FBpp0311774; FBgn0086357.
GeneID; 33905; -.
KEGG; dme:Dmel_CG9539; -.
UCSC; CG9539-RA; d. melanogaster.
CTD; 33905; -.
FlyBase; FBgn0086357; Sec61alpha.
eggNOG; KOG1373; Eukaryota.
eggNOG; COG0201; LUCA.
GeneTree; ENSGT00390000003721; -.
KO; K10956; -.
OMA; KWGIGSG; -.
OrthoDB; EOG091G05FO; -.
Reactome; R-DME-381038; XBP1(S) activates chaperone genes.
ChiTaRS; Sec61alpha; fly.
GenomeRNAi; 33905; -.
Proteomes; UP000000803; Chromosome 2L.
Bgee; FBgn0086357; -.
GO; GO:0012505; C:endomembrane system; IDA:FlyBase.
GO; GO:0005783; C:endoplasmic reticulum; IDA:FlyBase.
GO; GO:0045169; C:fusome; IDA:FlyBase.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005791; C:rough endoplasmic reticulum; IDA:FlyBase.
GO; GO:0098586; P:cellular response to virus; IMP:FlyBase.
GO; GO:0042335; P:cuticle development; IMP:FlyBase.
GO; GO:0007391; P:dorsal closure; IMP:FlyBase.
GO; GO:0008258; P:head involution; IMP:FlyBase.
GO; GO:0010507; P:negative regulation of autophagy; IMP:FlyBase.
GO; GO:0048812; P:neuron projection morphogenesis; IMP:FlyBase.
GO; GO:0010942; P:positive regulation of cell death; IMP:FlyBase.
GO; GO:0034761; P:positive regulation of iron ion transmembrane transport; IMP:FlyBase.
GO; GO:0046598; P:positive regulation of viral entry into host cell; IMP:FlyBase.
GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
Gene3D; 1.10.3370.10; -; 1.
InterPro; IPR002208; SecY/SEC61-alpha.
InterPro; IPR030659; SecY_CS.
InterPro; IPR023201; SecY_dom_sf.
InterPro; IPR019561; Translocon_Sec61/SecY_plug_dom.
PANTHER; PTHR10906; PTHR10906; 1.
Pfam; PF10559; Plug_translocon; 1.
Pfam; PF00344; SecY; 1.
PIRSF; PIRSF004557; SecY; 1.
SUPFAM; SSF103491; SSF103491; 1.
TIGRFAMs; TIGR00967; 3a0501s007; 1.
PROSITE; PS00755; SECY_1; 1.
PROSITE; PS00756; SECY_2; 1.
1: Evidence at protein level;
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Membrane {ECO:0000256|SAM:Phobius};
Protein transport {ECO:0000256|RuleBase:RU003484};
Proteomics identification {ECO:0000213|PeptideAtlas:Q8STG9};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Translocation {ECO:0000256|RuleBase:RU003484};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius};
Transport {ECO:0000256|RuleBase:RU003484}.
TRANSMEM 32 54 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 74 97 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 118 137 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 143 165 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 242 263 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 283 304 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 361 380 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 413 431 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 437 458 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 40 74 Plug_translocon.
{ECO:0000259|Pfam:PF10559}.
SEQUENCE 476 AA; 52185 MW; 2B377CA0B5D890CA CRC64;
MGIKFLEVIK PFCSILPEIA KPERKIQFRE KVLWTAITLF IFLVCCQIPL FGIMSSDSAD
PFYWIRVILA SNRGTLMELG ISPIVTSGLI MQLLAGAKII EVGDTPKDRA LFNGAQKLFG
MVITIGQAIV YVMTGMYGDP SEIGAGVCLL IIIQLFAAGL IVLLLDELLQ KGYGLGSGIS
LFIATNICET IVWKAFSPTT VTTGRGTEFE GAVIALFHLM ATRNDKVRAL REAFYRQNLP
NLMNLLATVL VFAVVIYFQG FRVDLPIKSA RYRGQYSSYP IKLFYTSNIP IILQSALVSN
LYVISQMLAV KFQGNFFINL LGVWADVGGG GPARSYPIGG LCYYLSPPES VGHILTDPIH
ALLYIVFMLG SCAFFSKTWI DVSGSSAKDV AKQLKEQHMV MRGHRENSMI HELNRYIPTA
AAFGGLCIGA LSVMADFLGA IGSGTGILLA VTIIYQYFEI FVKEQSEMGG MGTLLF


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